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The map label for this gene is dppE [H]

Identifier: 229918447

GI number: 229918447

Start: 2704912

End: 2706567

Strand: Direct

Name: dppE [H]

Synonym: EAT1b_2734

Alternate gene names: 229918447

Gene position: 2704912-2706567 (Clockwise)

Preceding gene: 229918446

Following gene: 229918450

Centisome position: 90.17

GC content: 46.44

Gene sequence:

>1656_bases
ATGAATAAGAAAAAAGGTTTTGCTTTAGCATCATCGGTTACACTTCTATCTAGTGCATTCCTAGCTGCATGTTCGACAGG
GGAAGAAACGGATTCTTCACAAGGATCAACAAACGAAGGTTCAGCAGATGAAGCGCAAGTCCTCAACTTGCTCGATTCTT
CAGATATTCCTTCACTTAACCCGACACTCGCAACAGATGCTGTATCGTTCAACGTGTTGAACAACGTTAACGAAGGTCTC
TACCGCATGGACGAAGAAGACAACCCGACTCCGGGGATGGCTGAATCTCACGAAGTTTCAGAAGACGGGAAAACGTACAC
GTTCAAAATCCGTGAAGGCGCGACTTGGTCAAACGGGGAGCCTGTCACAGCGAACGACTTCGAATACGCTTGGAAAGAAG
TACTCAACCCAGATAACGCATCACAATATGCATACGTTATGTCAATCATCGAAGGCGCAGAAGCGTACAACACAGGTGAA
GGCGAGCGCGATGCTGTAGGCGTTAAAGCAATCGACGATCAAACTCTTGAAGTTAAATTGACTGCACCAGCTGACTACTT
CCTCGGATTGACTAGCTTCGGCGTATTCATGCCAAAACTCGAGTCATTCGATACAGAGCAAGGTGAGAACTTCGGTACAT
CTGCAGAGACGACTCTCTACAACGGACCGTTCAAACTCGACAGCTGGGAGCGCGAGCAAGGCTGGAAGATGGTCAAGAAC
GAAGACTATTGGGATGCTGACACAGTTAAACTTGAAGAAATCAACGTTAAAGTCGTTAAAGAAGTTTCAACGGGTGTTAA
CTTGTATGAAAACGGTGACGTTGACCGCACAGGCTTGACTTCTGAGCTCGTAGCCCAATATCAAGACAGCGAAGAGTTCT
CAACTGTCGTTGAACCAACACTCTTCTACCTCCAGTTCAACACAGCTGTGGAAGAACTTAACAACCAAAAAATCCGTAAC
GCGATTGACAAAGCGTATGATAAAGCAGCAATCTCAGAGACGCTTCTTGCGAACGGTTCGATTCCTGCGAACTACCTCGT
ACCAAAAGATTTCGTAACAGGTCCTGACGGCAAAGATTTCCGTGAAGCGAACGGCGATATCGGTGGATACAATGTGGAAG
AAGCTCAAAAACTTTGGGAAGAAGGGCTTAAAGAGCTCGGAACAGACAAAGTTGAGCTTGAGCTCCTCAACTATGACTCA
GAGTCTGCGAAGCAAATCGGTGAGTTCATCAAAGGTGAACTTGAGAAGAACCTTCCAGGCATTTCGGTATCAATCAAGCA
ACAACCGTTCAACAACAAACTTGACCTTGAGAACAAAGGTGAGTTCGAGTTCACATTCGCTGGATGGGGACCTGACTACC
AAGATCCAATGACATTCGTTGACCTCTTCGTAACTGACGGACCATACAACCGTGGTAAGTGGTCGAACGAAGAATTCGAT
AAGTTGATTGAATCTGCGAAATCAAGCACAGATGCTGAACAGCGTTGGGCTGACCTTCAAGCTGCGGAGAAAATCGTTCT
TGAAGAGAACGCAATCTCGCCAGTTTACCAACGTGGATCGGCTCGCCTCACGAAACCTTATGTTAAGGACATCGTTGAGC
ATGCATTCGGTGCGGACTACTCTTACAAGTGGGCTTCAATCGAAGGCAAAGAATAA

Upstream 100 bases:

>100_bases
GCATCAACGGGATTTTGGTAACAAATACTGTCAGAAGAAATGACTGAATTTTCTACCATCATTCACTTCGTTAAAACGAA
AAAATCAGGGGGTCATCGCA

Downstream 100 bases:

>100_bases
TCAAATCATCTTACGAAGAGAGACAGGGACGCCTGTTTCTCTTTTTATGTACATTTTTTTATACAAAAAAGAACTCTCAC
ATGGAGAGTTCTTTCACAAC

Product: extracellular solute-binding protein family 5

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 551; Mature: 551

Protein sequence:

>551_residues
MNKKKGFALASSVTLLSSAFLAACSTGEETDSSQGSTNEGSADEAQVLNLLDSSDIPSLNPTLATDAVSFNVLNNVNEGL
YRMDEEDNPTPGMAESHEVSEDGKTYTFKIREGATWSNGEPVTANDFEYAWKEVLNPDNASQYAYVMSIIEGAEAYNTGE
GERDAVGVKAIDDQTLEVKLTAPADYFLGLTSFGVFMPKLESFDTEQGENFGTSAETTLYNGPFKLDSWEREQGWKMVKN
EDYWDADTVKLEEINVKVVKEVSTGVNLYENGDVDRTGLTSELVAQYQDSEEFSTVVEPTLFYLQFNTAVEELNNQKIRN
AIDKAYDKAAISETLLANGSIPANYLVPKDFVTGPDGKDFREANGDIGGYNVEEAQKLWEEGLKELGTDKVELELLNYDS
ESAKQIGEFIKGELEKNLPGISVSIKQQPFNNKLDLENKGEFEFTFAGWGPDYQDPMTFVDLFVTDGPYNRGKWSNEEFD
KLIESAKSSTDAEQRWADLQAAEKIVLEENAISPVYQRGSARLTKPYVKDIVEHAFGADYSYKWASIEGKE

Sequences:

>Translated_551_residues
MNKKKGFALASSVTLLSSAFLAACSTGEETDSSQGSTNEGSADEAQVLNLLDSSDIPSLNPTLATDAVSFNVLNNVNEGL
YRMDEEDNPTPGMAESHEVSEDGKTYTFKIREGATWSNGEPVTANDFEYAWKEVLNPDNASQYAYVMSIIEGAEAYNTGE
GERDAVGVKAIDDQTLEVKLTAPADYFLGLTSFGVFMPKLESFDTEQGENFGTSAETTLYNGPFKLDSWEREQGWKMVKN
EDYWDADTVKLEEINVKVVKEVSTGVNLYENGDVDRTGLTSELVAQYQDSEEFSTVVEPTLFYLQFNTAVEELNNQKIRN
AIDKAYDKAAISETLLANGSIPANYLVPKDFVTGPDGKDFREANGDIGGYNVEEAQKLWEEGLKELGTDKVELELLNYDS
ESAKQIGEFIKGELEKNLPGISVSIKQQPFNNKLDLENKGEFEFTFAGWGPDYQDPMTFVDLFVTDGPYNRGKWSNEEFD
KLIESAKSSTDAEQRWADLQAAEKIVLEENAISPVYQRGSARLTKPYVKDIVEHAFGADYSYKWASIEGKE
>Mature_551_residues
MNKKKGFALASSVTLLSSAFLAACSTGEETDSSQGSTNEGSADEAQVLNLLDSSDIPSLNPTLATDAVSFNVLNNVNEGL
YRMDEEDNPTPGMAESHEVSEDGKTYTFKIREGATWSNGEPVTANDFEYAWKEVLNPDNASQYAYVMSIIEGAEAYNTGE
GERDAVGVKAIDDQTLEVKLTAPADYFLGLTSFGVFMPKLESFDTEQGENFGTSAETTLYNGPFKLDSWEREQGWKMVKN
EDYWDADTVKLEEINVKVVKEVSTGVNLYENGDVDRTGLTSELVAQYQDSEEFSTVVEPTLFYLQFNTAVEELNNQKIRN
AIDKAYDKAAISETLLANGSIPANYLVPKDFVTGPDGKDFREANGDIGGYNVEEAQKLWEEGLKELGTDKVELELLNYDS
ESAKQIGEFIKGELEKNLPGISVSIKQQPFNNKLDLENKGEFEFTFAGWGPDYQDPMTFVDLFVTDGPYNRGKWSNEEFD
KLIESAKSSTDAEQRWADLQAAEKIVLEENAISPVYQRGSARLTKPYVKDIVEHAFGADYSYKWASIEGKE

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the binding of dipeptides with high affinity. Is expressed to facilitate adaptation to nutrient deficiency conditions, which also induce sporulation [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1789397, Length=539, Percent_Identity=28.5714285714286, Blast_Score=204, Evalue=1e-53,
Organism=Escherichia coli, GI87081878, Length=486, Percent_Identity=28.8065843621399, Blast_Score=203, Evalue=3e-53,
Organism=Escherichia coli, GI1787495, Length=535, Percent_Identity=29.9065420560748, Blast_Score=195, Evalue=7e-51,
Organism=Escherichia coli, GI1787762, Length=446, Percent_Identity=24.6636771300448, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1787052, Length=480, Percent_Identity=23.125, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1789966, Length=441, Percent_Identity=23.3560090702948, Blast_Score=94, Evalue=3e-20,
Organism=Escherichia coli, GI1789887, Length=512, Percent_Identity=24.4140625, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI1787551, Length=505, Percent_Identity=20.5940594059406, Blast_Score=75, Evalue=9e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 61140; Mature: 61140

Theoretical pI: Translated: 4.01; Mature: 4.01

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKKGFALASSVTLLSSAFLAACSTGEETDSSQGSTNEGSADEAQVLNLLDSSDIPSLN
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC
PTLATDAVSFNVLNNVNEGLYRMDEEDNPTPGMAESHEVSEDGKTYTFKIREGATWSNGE
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC
PVTANDFEYAWKEVLNPDNASQYAYVMSIIEGAEAYNTGEGERDAVGVKAIDDQTLEVKL
CCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEEEEEE
TAPADYFLGLTSFGVFMPKLESFDTEQGENFGTSAETTLYNGPFKLDSWEREQGWKMVKN
ECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHCCCEECCC
EDYWDADTVKLEEINVKVVKEVSTGVNLYENGDVDRTGLTSELVAQYQDSEEFSTVVEPT
CCCCCCCCEEEEECCHHHEEHHHHCCCEEECCCCCCCCCHHHHHHHHCCCHHHHHHHCCE
LFYLQFNTAVEELNNQKIRNAIDKAYDKAAISETLLANGSIPANYLVPKDFVTGPDGKDF
EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCHH
REANGDIGGYNVEEAQKLWEEGLKELGTDKVELELLNYDSESAKQIGEFIKGELEKNLPG
HHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCC
ISVSIKQQPFNNKLDLENKGEFEFTFAGWGPDYQDPMTFVDLFVTDGPYNRGKWSNEEFD
CEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHH
KLIESAKSSTDAEQRWADLQAAEKIVLEENAISPVYQRGSARLTKPYVKDIVEHAFGADY
HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCC
SYKWASIEGKE
CEEEECCCCCC
>Mature Secondary Structure
MNKKKGFALASSVTLLSSAFLAACSTGEETDSSQGSTNEGSADEAQVLNLLDSSDIPSLN
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC
PTLATDAVSFNVLNNVNEGLYRMDEEDNPTPGMAESHEVSEDGKTYTFKIREGATWSNGE
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC
PVTANDFEYAWKEVLNPDNASQYAYVMSIIEGAEAYNTGEGERDAVGVKAIDDQTLEVKL
CCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEEEEEE
TAPADYFLGLTSFGVFMPKLESFDTEQGENFGTSAETTLYNGPFKLDSWEREQGWKMVKN
ECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHCCCEECCC
EDYWDADTVKLEEINVKVVKEVSTGVNLYENGDVDRTGLTSELVAQYQDSEEFSTVVEPT
CCCCCCCCEEEEECCHHHEEHHHHCCCEEECCCCCCCCCHHHHHHHHCCCHHHHHHHCCE
LFYLQFNTAVEELNNQKIRNAIDKAYDKAAISETLLANGSIPANYLVPKDFVTGPDGKDF
EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCHH
REANGDIGGYNVEEAQKLWEEGLKELGTDKVELELLNYDSESAKQIGEFIKGELEKNLPG
HHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCC
ISVSIKQQPFNNKLDLENKGEFEFTFAGWGPDYQDPMTFVDLFVTDGPYNRGKWSNEEFD
CEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHH
KLIESAKSSTDAEQRWADLQAAEKIVLEENAISPVYQRGSARLTKPYVKDIVEHAFGADY
HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCC
SYKWASIEGKE
CEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1766370; 9384377 [H]