| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is mreC [H]
Identifier: 229918388
GI number: 229918388
Start: 2642574
End: 2643464
Strand: Direct
Name: mreC [H]
Synonym: EAT1b_2673
Alternate gene names: 229918388
Gene position: 2642574-2643464 (Clockwise)
Preceding gene: 229918387
Following gene: 229918389
Centisome position: 88.09
GC content: 53.87
Gene sequence:
>891_bases ATGAGCCGATTCGTACGTAATAAAAAGCTCATCATCACGCTAATTGTACTGATCTTGTTTTTCGTCATTTTAGGGGTTTC GATTCGAGGACGATCGGAATCAGCCTGGTACCAAGATGTCACGCGTGATGTGGTCGGCACGTTCCAGCGAGTGTTCGCGG TACCAATCGGATGGATGGACTCGACGGTCTCGTCCATCTCAGACGTCCGCGATATCTACGAAGAGAACCGCCAGCTGAAA GAACATTTGGCGAAGTACGCCGAGGTATCGGTTGAGGCGGATGATTTGCGCCGTGAGAATGAGGAGCTTCGAAAGATGGT CGAAGCGAAAGACGAGTCGTTACGTGACTTCGACCTCATTCCGGCGGAGGTCATCGGTCGGACACCGAACGATTGGCAAC GCTACGTCACCATCAACGTCGGTTCAGAACGCGGCGTTGAGAAGGGCATGGCCGTGACCGCGGCGAGCGGGATGGTCGGT CGTGTCATTCAAACGAGCGCCTATACGTCGCAAGTGCAACTGCTCAGCGACAACAACCGGACGAACAACGTCTCGGCTGT GGTCAAAGATGCGGACGGCAAACCGACGTATGGGACGGTTGACGGATTCGATACGGAGACGAACGAATTGTTCTTCACGA AAGTGTCGAATAGCGTCAAGCTGAAAGAAGGAGAAATCGTCTCGACGTCCGGACTCGGTGGACGTTATCCGGCCGGGCTC GTCATCGGTACGATTGAGTCGATCGAGACGGATGAATATGGCGTCTCACAAGTCGCCCGGATTAAACCGGAGGCCGACTT CAATGAGTTCTCACAAATGTACGTGATTGATCGGACACTAGACGAACCGTTTCTAACGGGTCCCGAGGAAGGAGGAGCAG CGGGTGAGTAA
Upstream 100 bases:
>100_bases CTCGACTGCGTAGCGGTCGGTACTGGAAAATCTCTTGAAATGATGGACGTCCTCCGTTCGAAATCAGGCATCTCGTCACG TCGATGAGAGGTGAGACACG
Downstream 100 bases:
>100_bases CATGAAAGTGTTCATCGCCCTGTTCCTCCTTTTTCTTATTGAAGGAACATGGGCATCGATTTTTTCTTGGCACTACGCCA CGCCGTTTCTTTTGTTGACG
Product: rod shape-determining protein MreC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MSRFVRNKKLIITLIVLILFFVILGVSIRGRSESAWYQDVTRDVVGTFQRVFAVPIGWMDSTVSSISDVRDIYEENRQLK EHLAKYAEVSVEADDLRRENEELRKMVEAKDESLRDFDLIPAEVIGRTPNDWQRYVTINVGSERGVEKGMAVTAASGMVG RVIQTSAYTSQVQLLSDNNRTNNVSAVVKDADGKPTYGTVDGFDTETNELFFTKVSNSVKLKEGEIVSTSGLGGRYPAGL VIGTIESIETDEYGVSQVARIKPEADFNEFSQMYVIDRTLDEPFLTGPEEGGAAGE
Sequences:
>Translated_296_residues MSRFVRNKKLIITLIVLILFFVILGVSIRGRSESAWYQDVTRDVVGTFQRVFAVPIGWMDSTVSSISDVRDIYEENRQLK EHLAKYAEVSVEADDLRRENEELRKMVEAKDESLRDFDLIPAEVIGRTPNDWQRYVTINVGSERGVEKGMAVTAASGMVG RVIQTSAYTSQVQLLSDNNRTNNVSAVVKDADGKPTYGTVDGFDTETNELFFTKVSNSVKLKEGEIVSTSGLGGRYPAGL VIGTIESIETDEYGVSQVARIKPEADFNEFSQMYVIDRTLDEPFLTGPEEGGAAGE >Mature_295_residues SRFVRNKKLIITLIVLILFFVILGVSIRGRSESAWYQDVTRDVVGTFQRVFAVPIGWMDSTVSSISDVRDIYEENRQLKE HLAKYAEVSVEADDLRRENEELRKMVEAKDESLRDFDLIPAEVIGRTPNDWQRYVTINVGSERGVEKGMAVTAASGMVGR VIQTSAYTSQVQLLSDNNRTNNVSAVVKDADGKPTYGTVDGFDTETNELFFTKVSNSVKLKEGEIVSTSGLGGRYPAGLV IGTIESIETDEYGVSQVARIKPEADFNEFSQMYVIDRTLDEPFLTGPEEGGAAGE
Specific function: Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins [H]
COG id: COG1792
COG function: function code M; Cell shape-determining protein
Gene ontology:
Cell location: Inner Membrane-Anchored [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mreC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007221 - InterPro: IPR005223 [H]
Pfam domain/function: PF04085 MreC [H]
EC number: NA
Molecular weight: Translated: 32858; Mature: 32727
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRFVRNKKLIITLIVLILFFVILGVSIRGRSESAWYQDVTRDVVGTFQRVFAVPIGWMD CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHH STVSSISDVRDIYEENRQLKEHLAKYAEVSVEADDLRRENEELRKMVEAKDESLRDFDLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC PAEVIGRTPNDWQRYVTINVGSERGVEKGMAVTAASGMVGRVIQTSAYTSQVQLLSDNNR CHHHHCCCCCCCEEEEEEECCCCCCHHCCCEEEECCCHHHHHHHHHHHHHEEEEECCCCC TNNVSAVVKDADGKPTYGTVDGFDTETNELFFTKVSNSVKLKEGEIVSTSGLGGRYPAGL CCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCEEEECCCCCCCCCCE VIGTIESIETDEYGVSQVARIKPEADFNEFSQMYVIDRTLDEPFLTGPEEGGAAGE EEECHHHCCCCCCCHHHHHHCCCCCCHHHHHHEEEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SRFVRNKKLIITLIVLILFFVILGVSIRGRSESAWYQDVTRDVVGTFQRVFAVPIGWMD CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHH STVSSISDVRDIYEENRQLKEHLAKYAEVSVEADDLRRENEELRKMVEAKDESLRDFDLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC PAEVIGRTPNDWQRYVTINVGSERGVEKGMAVTAASGMVGRVIQTSAYTSQVQLLSDNNR CHHHHCCCCCCCEEEEEEECCCCCCHHCCCEEEECCCHHHHHHHHHHHHHEEEEECCCCC TNNVSAVVKDADGKPTYGTVDGFDTETNELFFTKVSNSVKLKEGEIVSTSGLGGRYPAGL CCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCEEEECCCCCCCCCCE VIGTIESIETDEYGVSQVARIKPEADFNEFSQMYVIDRTLDEPFLTGPEEGGAAGE EEECHHHCCCCCCCHHHHHHCCCCCCHHHHHHEEEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1400225; 1400224; 9384377 [H]