| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229918312
Identifier: 229918312
GI number: 229918312
Start: 2564017
End: 2565555
Strand: Direct
Name: 229918312
Synonym: EAT1b_2596
Alternate gene names: NA
Gene position: 2564017-2565555 (Clockwise)
Preceding gene: 229918311
Following gene: 229918314
Centisome position: 85.47
GC content: 52.37
Gene sequence:
>1539_bases ATGGAACTTGTACAGCAATTATCTCAAATGCAACTGATCAACCAATTCTGGTTGCTTATGGCCTTCGTCATTCCAATGGT CATTTTATCTCGTATGGTCGTGGCTGGGACGCGTTTTTCGCCGATCCTCGTCATCGTCATCTTCGGTCTCGGTCTCGGAT TCGGTATGGTCGAGCTCGGTATCGCGACGCCGGGTCTTCCTGAATTCCCGCTCGTCGACTTCTTGTCACGGACGACAATC ATCGCCTTGGTCGTTTCGTTCTTCGTCGGTGGACAGGAACTTCGTAAAATCTTGAGCAAACAAGAGCTCGACATGGAGGA CATCGTCGTTCCTTCTAATGAAGAGATGTTCCTCGGGACAGGACGTACGCAGTTCATCTTCATCCTTCGTTCGTTCTTCT TGCTCGTCGGTTTGGAAGGGTTCTTCCGTATGGCAATCGAGCCAGGTACGGCAGAAGGGATTGCGCTTTACTACCCAATC CTCGCACTCCTCGGTCTTGCGGTGTCGTTCTTACTCATCGACCATAAAGCACAGATTCAGGACAAGAAAGTATACATGCA AAAAGGTGTCATCGAGACAGTCCTCTTGCTTGTCATCTTGTTCGTCTCGTTCCTGATTGCGACAGCGGTTCAGCCGATTA TCGCACTTCCGCAAATCTTCTTTGCGATGTTGATTTCGTCAGCACTCGGTGCCATCTTCCATAACTGGACGTATGGACCG ACTGTCCGCGCGCTTCTCTTCGCAGGGATTCCGGTCGTCTTGGCTGCCAACTTCATGGTCGGTGGTTCACGAATCGGTGA TGCGTTCGCCATCGAAGGCATGAACTCGATTCTCGTGTACGGTTTCTTCGGACAGTTGTTCTGGATGTTCGGTGGAATCG CACTCATCATGTGGTTTGCTCGCACAGGTCACATCCGTAACCTCGCGCCAGGTATGGCGGGGTCACTTTCACACAGTGGT CTCACAGGAGCATGTACGGCTGGGGACTTCGGTCAAGTGGCGGCGAAACGTGCACCGATCATGATCAACATCCCGTTCTT TGGACATATCTTCGTCTTCTCGATTCTCGCGGTCAGTGCCGACAACGGCGCGCTCTGGATCTGGCCGACGATGATCATCG TCTTGGTCGGTCTCGCGCTCACGGCGCTTTCGTTGAAAAACTTGCGTGCGGCGAACGGGGAAGACTTCAAAGAAGTCAAA GCCCTTATGCAGTTCTCGTTCGGATGGCAGATGATGGCCGTCTTCGGTGGTCTCGTCATCTTGACGTTCAGCACGATTGC ATTTGATTACACGACGATGGCACAATCGTCAGCGATCTCGCACTTCGGCTTGTTCGCAGCGGTTCAAGGTGGAATGTTCG GGACGGAAGCCTCGCTTCTCATCCCGCTCATCTTCTCGATGCCGTTCCTCGTGCACCCAATCGTCTTCTACATGTTCGGG AAAGCACTCGACAACAATGGCGAAATGCCACGTGTACCGGTATATGCGATGGCGCTCGTTGGTGTCGTCGGTGTATCTGC AGCGATTTTCGTTTTGTAA
Upstream 100 bases:
>100_bases CGCTTTCAATGTTTACAAAACATCACACCCTATTGTCACACAATGTTCATTCCTGTACACTTCGATATTGTGTGCTAAAA ATTATGTTAGGGGTTAGTCA
Downstream 100 bases:
>100_bases TAGGACTCCGCTCTGACTTCGGTCAGGGCGGTTTTTTGTTGAAATGGATATGGTGTAGACATCAAGTTAATTTGGGTCTC AAGCACTTTAGGTGAGAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 512; Mature: 512
Protein sequence:
>512_residues MELVQQLSQMQLINQFWLLMAFVIPMVILSRMVVAGTRFSPILVIVIFGLGLGFGMVELGIATPGLPEFPLVDFLSRTTI IALVVSFFVGGQELRKILSKQELDMEDIVVPSNEEMFLGTGRTQFIFILRSFFLLVGLEGFFRMAIEPGTAEGIALYYPI LALLGLAVSFLLIDHKAQIQDKKVYMQKGVIETVLLLVILFVSFLIATAVQPIIALPQIFFAMLISSALGAIFHNWTYGP TVRALLFAGIPVVLAANFMVGGSRIGDAFAIEGMNSILVYGFFGQLFWMFGGIALIMWFARTGHIRNLAPGMAGSLSHSG LTGACTAGDFGQVAAKRAPIMINIPFFGHIFVFSILAVSADNGALWIWPTMIIVLVGLALTALSLKNLRAANGEDFKEVK ALMQFSFGWQMMAVFGGLVILTFSTIAFDYTTMAQSSAISHFGLFAAVQGGMFGTEASLLIPLIFSMPFLVHPIVFYMFG KALDNNGEMPRVPVYAMALVGVVGVSAAIFVL
Sequences:
>Translated_512_residues MELVQQLSQMQLINQFWLLMAFVIPMVILSRMVVAGTRFSPILVIVIFGLGLGFGMVELGIATPGLPEFPLVDFLSRTTI IALVVSFFVGGQELRKILSKQELDMEDIVVPSNEEMFLGTGRTQFIFILRSFFLLVGLEGFFRMAIEPGTAEGIALYYPI LALLGLAVSFLLIDHKAQIQDKKVYMQKGVIETVLLLVILFVSFLIATAVQPIIALPQIFFAMLISSALGAIFHNWTYGP TVRALLFAGIPVVLAANFMVGGSRIGDAFAIEGMNSILVYGFFGQLFWMFGGIALIMWFARTGHIRNLAPGMAGSLSHSG LTGACTAGDFGQVAAKRAPIMINIPFFGHIFVFSILAVSADNGALWIWPTMIIVLVGLALTALSLKNLRAANGEDFKEVK ALMQFSFGWQMMAVFGGLVILTFSTIAFDYTTMAQSSAISHFGLFAAVQGGMFGTEASLLIPLIFSMPFLVHPIVFYMFG KALDNNGEMPRVPVYAMALVGVVGVSAAIFVL >Mature_512_residues MELVQQLSQMQLINQFWLLMAFVIPMVILSRMVVAGTRFSPILVIVIFGLGLGFGMVELGIATPGLPEFPLVDFLSRTTI IALVVSFFVGGQELRKILSKQELDMEDIVVPSNEEMFLGTGRTQFIFILRSFFLLVGLEGFFRMAIEPGTAEGIALYYPI LALLGLAVSFLLIDHKAQIQDKKVYMQKGVIETVLLLVILFVSFLIATAVQPIIALPQIFFAMLISSALGAIFHNWTYGP TVRALLFAGIPVVLAANFMVGGSRIGDAFAIEGMNSILVYGFFGQLFWMFGGIALIMWFARTGHIRNLAPGMAGSLSHSG LTGACTAGDFGQVAAKRAPIMINIPFFGHIFVFSILAVSADNGALWIWPTMIIVLVGLALTALSLKNLRAANGEDFKEVK ALMQFSFGWQMMAVFGGLVILTFSTIAFDYTTMAQSSAISHFGLFAAVQGGMFGTEASLLIPLIFSMPFLVHPIVFYMFG KALDNNGEMPRVPVYAMALVGVVGVSAAIFVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55632; Mature: 55632
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: PS00211 ABC_TRANSPORTER_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELVQQLSQMQLINQFWLLMAFVIPMVILSRMVVAGTRFSPILVIVIFGLGLGFGMVELG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC IATPGLPEFPLVDFLSRTTIIALVVSFFVGGQELRKILSKQELDMEDIVVPSNEEMFLGT CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHEECCCCCCEEEEC GRTQFIFILRSFFLLVGLEGFFRMAIEPGTAEGIALYYPILALLGLAVSFLLIDHKAQIQ CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH DKKVYMQKGVIETVLLLVILFVSFLIATAVQPIIALPQIFFAMLISSALGAIFHNWTYGP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH TVRALLFAGIPVVLAANFMVGGSRIGDAFAIEGMNSILVYGFFGQLFWMFGGIALIMWFA HHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RTGHIRNLAPGMAGSLSHSGLTGACTAGDFGQVAAKRAPIMINIPFFGHIFVFSILAVSA HCCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEECCHHHHHHHHHHHHHCC DNGALWIWPTMIIVLVGLALTALSLKNLRAANGEDFKEVKALMQFSFGWQMMAVFGGLVI CCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHH LTFSTIAFDYTTMAQSSAISHFGLFAAVQGGMFGTEASLLIPLIFSMPFLVHPIVFYMFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KALDNNGEMPRVPVYAMALVGVVGVSAAIFVL HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MELVQQLSQMQLINQFWLLMAFVIPMVILSRMVVAGTRFSPILVIVIFGLGLGFGMVELG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC IATPGLPEFPLVDFLSRTTIIALVVSFFVGGQELRKILSKQELDMEDIVVPSNEEMFLGT CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHEECCCCCCEEEEC GRTQFIFILRSFFLLVGLEGFFRMAIEPGTAEGIALYYPILALLGLAVSFLLIDHKAQIQ CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH DKKVYMQKGVIETVLLLVILFVSFLIATAVQPIIALPQIFFAMLISSALGAIFHNWTYGP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH TVRALLFAGIPVVLAANFMVGGSRIGDAFAIEGMNSILVYGFFGQLFWMFGGIALIMWFA HHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RTGHIRNLAPGMAGSLSHSGLTGACTAGDFGQVAAKRAPIMINIPFFGHIFVFSILAVSA HCCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEECCHHHHHHHHHHHHHCC DNGALWIWPTMIIVLVGLALTALSLKNLRAANGEDFKEVKALMQFSFGWQMMAVFGGLVI CCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHH LTFSTIAFDYTTMAQSSAISHFGLFAAVQGGMFGTEASLLIPLIFSMPFLVHPIVFYMFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KALDNNGEMPRVPVYAMALVGVVGVSAAIFVL HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA