| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is yitT [H]
Identifier: 229918229
GI number: 229918229
Start: 2475369
End: 2476217
Strand: Direct
Name: yitT [H]
Synonym: EAT1b_2509
Alternate gene names: 229918229
Gene position: 2475369-2476217 (Clockwise)
Preceding gene: 229918228
Following gene: 229918231
Centisome position: 82.52
GC content: 50.18
Gene sequence:
>849_bases TTGACGGAAGCCGTTAAAGAACATGCACGAATCGGGGTTGTCTCAATCATCGGAGGATTGTTCGTTGCCTTATCCATGAC ATTATTTTTAATTCCAGCTGGCGTCTATTCGACAGGATTTACGGGTCTTGCCCAAATCTTGACGAAATTATTAGAGGGTA CACCGCTTGAACTAGGGGAAGGACTCTGGTTCTTTATTCTGAACGCACCACTTCTCGTCGTCAGTTATTTTATGCTCGGG CGGAACATGATGATTCATACGCTGGTCAGTGTCGCCTCGGTCACGTTGTTCATTCGTTTGCTTCCGCAATCGCAGCTTCT CTCGGACGACCCGCTCTTGAACGCTGTATTCGGCGGTGTGCTCTTGGCAATCGGTTCGGGCATCACGATCCGGTACGGAG CCTCGACAGGTGGCTTTGATATCGTCGCATTGATTTTGGCGAAATTCACGAACAACTCGGTCGGGGTCTATCTCTTCTTG ATGAACATGATGATTGCCCTTGCTGCAGGCGCCTTGTTCGGATGGCCGACAGCGCTCTACACGATCGTCTTCTTGTATGT GACGTCAAAAGTCATCGATGAGATTTATACGAATACACAGCGTCAAACGCTCTTCATCGTCACGAGCCATCCAGACGAAG TGACGAAGGAGTTACATCAGCATGTCTTCCGTGGGATTACGCTCATGCCGGCAATTGGCACGTACTCGAAAGTCGAGAAG GCGACGCTCATGATGGTTGCGCAACGACACGAGGTGCGTGAAATCACGCGCATCTGTAAAGATGCCGATCCGACCGTCTT CATCAATATGGTTCCGACTGAAGATGTAGAAGGCGCGTTCCGTCGCTAA
Upstream 100 bases:
>100_bases TATGAAAAACTTATCGGATTTCCTGCATATTTGCTGTATGCAGCATGAATAATCTATGTTATCTTGATTCTTAGCTATTT TGAGAAAGGGGAGTTGAAGC
Downstream 100 bases:
>100_bases CTAGACCCCTACTGTGCACGCAGTAGGGGTTATTATATATGTATGACATAAGACGTTTTGGGGAGGATACGTGATGATTG GGGTCAGCATTGCGACGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MTEAVKEHARIGVVSIIGGLFVALSMTLFLIPAGVYSTGFTGLAQILTKLLEGTPLELGEGLWFFILNAPLLVVSYFMLG RNMMIHTLVSVASVTLFIRLLPQSQLLSDDPLLNAVFGGVLLAIGSGITIRYGASTGGFDIVALILAKFTNNSVGVYLFL MNMMIALAAGALFGWPTALYTIVFLYVTSKVIDEIYTNTQRQTLFIVTSHPDEVTKELHQHVFRGITLMPAIGTYSKVEK ATLMMVAQRHEVREITRICKDADPTVFINMVPTEDVEGAFRR
Sequences:
>Translated_282_residues MTEAVKEHARIGVVSIIGGLFVALSMTLFLIPAGVYSTGFTGLAQILTKLLEGTPLELGEGLWFFILNAPLLVVSYFMLG RNMMIHTLVSVASVTLFIRLLPQSQLLSDDPLLNAVFGGVLLAIGSGITIRYGASTGGFDIVALILAKFTNNSVGVYLFL MNMMIALAAGALFGWPTALYTIVFLYVTSKVIDEIYTNTQRQTLFIVTSHPDEVTKELHQHVFRGITLMPAIGTYSKVEK ATLMMVAQRHEVREITRICKDADPTVFINMVPTEDVEGAFRR >Mature_281_residues TEAVKEHARIGVVSIIGGLFVALSMTLFLIPAGVYSTGFTGLAQILTKLLEGTPLELGEGLWFFILNAPLLVVSYFMLGR NMMIHTLVSVASVTLFIRLLPQSQLLSDDPLLNAVFGGVLLAIGSGITIRYGASTGGFDIVALILAKFTNNSVGVYLFLM NMMIALAAGALFGWPTALYTIVFLYVTSKVIDEIYTNTQRQTLFIVTSHPDEVTKELHQHVFRGITLMPAIGTYSKVEKA TLMMVAQRHEVREITRICKDADPTVFINMVPTEDVEGAFRR
Specific function: Unknown
COG id: COG1284
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0750 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003740 - InterPro: IPR019264 [H]
Pfam domain/function: PF02588 DUF161; PF10035 DUF2179 [H]
EC number: NA
Molecular weight: Translated: 30911; Mature: 30780
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEAVKEHARIGVVSIIGGLFVALSMTLFLIPAGVYSTGFTGLAQILTKLLEGTPLELGE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHCCCCCCCCC GLWFFILNAPLLVVSYFMLGRNMMIHTLVSVASVTLFIRLLPQSQLLSDDPLLNAVFGGV CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHH LLAIGSGITIRYGASTGGFDIVALILAKFTNNSVGVYLFLMNMMIALAAGALFGWPTALY HHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TIVFLYVTSKVIDEIYTNTQRQTLFIVTSHPDEVTKELHQHVFRGITLMPAIGTYSKVEK HHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCHHCCCCCHHHHHH ATLMMVAQRHEVREITRICKDADPTVFINMVPTEDVEGAFRR HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCC >Mature Secondary Structure TEAVKEHARIGVVSIIGGLFVALSMTLFLIPAGVYSTGFTGLAQILTKLLEGTPLELGE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHCCCCCCCCC GLWFFILNAPLLVVSYFMLGRNMMIHTLVSVASVTLFIRLLPQSQLLSDDPLLNAVFGGV CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHH LLAIGSGITIRYGASTGGFDIVALILAKFTNNSVGVYLFLMNMMIALAAGALFGWPTALY HHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TIVFLYVTSKVIDEIYTNTQRQTLFIVTSHPDEVTKELHQHVFRGITLMPAIGTYSKVEK HHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCHHCCCCCHHHHHH ATLMMVAQRHEVREITRICKDADPTVFINMVPTEDVEGAFRR HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8226659; 9025291; 9353931; 9384377 [H]