| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is yvdK [H]
Identifier: 229918228
GI number: 229918228
Start: 2472925
End: 2475222
Strand: Direct
Name: yvdK [H]
Synonym: EAT1b_2508
Alternate gene names: 229918228
Gene position: 2472925-2475222 (Clockwise)
Preceding gene: 229918227
Following gene: 229918229
Centisome position: 82.43
GC content: 49.26
Gene sequence:
>2298_bases ATGAAACGATTGTTTGCAGTCGATGAATGGAAAGTAACAGAGGAAGGTCTTCACCCGAAAGAGAACCGCCTTGCAGAATC AATCACATCGCTCGGGAACGGGCATATGGGGATGCGAGGGAACTTTGAGGAAGATTACTCGAATGATACGCACCAAGGAT TCTACGTGGCGGGCGTCTACTATCCGGATAAAACACGTGTCGGTTGGTGGAAGAACGGATACCCTGAATACTTTGCCAAA GTGTTGAATGCGACAAACGTCATTGGTCTCCGCGTGGTCATCAATGGGACACCGGTCGACTTGGCGAAATGGGAAGTGAG AGATTTCACACGCGAGCTCGATATGCAACGTGGTGTTCTCACACGGACGTTCACCTTGATGAACGGGACCGAAGAGACGA AAGTGGAAGTCGTCCGCTTCTTCTCGATCGTAGATAAAGAAATCTTGGCCATCCGTTACAACGTCACACCAGTCAACTAC GAAGCAAAAATTGAGTTCACGCCTTATTTAGATGGCGATGTCGTCAACGAAGACTCGAACTACGATGAGAAGTTCTGGCT TCCGGTTGACCGTGGTGTGGAAGAGCGTTTCGCTTTCGTTACGACGAAGACGAAGAAACTCGACTGGCATGTCACGGCAT CAATGATCGCGGACGTCGAAGGCGCTCGTTGTGAAGTGCTTGAAGCGACAGATTTATTCGTTGCCAATAAATTCACGGTC AACGTAGCTGCTGGTGAGACAGCGACAGCCTACAAATATGTGTCGGTCGTCACGAACCGCGACCACGAGATTGAAGCATT GCAGTCAGCTGGGATGACACGTGTCGAAGCGGCGTTCGAAAAAGGATTTGAGACACTTCTCGCTGAACAGACGGAAGCAT GGCTCGCACGCTGGGAAGATGCGGATGTTCGCATCGATGGAGACATCGAGGCACAACAAGGGATCCGCTTTAACATCTTC AACATGTATCAAACATATACAGGTGAAGATTCACGTCTTAACATCGGTCCAAAAGGATTTACAGGTGAGAAGTACGGCGG TGCGACGTATTGGGATACAGAAGCCTATTGCCTCCACTTCTACTTGGCGACAGCCAAACCAGAAGTCTCATGGAACTTGC TCAAATACCGTCACAATCAACTGCCACAGGCGAAAGAGAATGCTGTGAAGAATGTCGGTATGGAAGGTGCGCTTTATCCG ATGGTCACGATGAACGGGGAAGAGTGCCACAACGAGTGGGAAATCACGCATGAAGAGATTCACCGTAACGGTGCGATCGC CCATGCCATTTTCAACTACACGAACTTCACAGGCGACAAGTCGTACCTTGGACAATACGGATTGGAAGTATTGGTCGAGA TCTCGCGTTACTGGGCTAGCCGCGTCAACTTTGTCCCGCACAAAGACGTGTATATGATCCTAGGCGTCACAGGTCCGAAC GAATATGACAACAACGTTAACAACAACTGGTACACGAACTTGATTGCCGCATGGACGCTCGAATATACGCAGGAAGTGTA CAACTACTTGAAAGATGCAGAACCTGCACGTCTCGAAGAGCTCGTGTCGACACTCGGCATCACGGACGCTGAACTTGCGA AGTGGGCGGACATCCAAACGAAGATGTATTATCCAAAAGATGATCTCGTTCCAGATGTTTTCATGCAACAGGACGGATTC ATGGATAAAGAGCAGATTTTGGTGAAAGACCTCGATCCGAAACATCTTCCGCTCAACCAAAACTGGTCATGGGATCGCAT CCTTCGCTCGAACTTTATCAAACAAGCAGACGTCCTCCAAGGACTCTATACGTTCGGTGACCGCTTCACGGTCGAACAGA AACGTGCAAACTTTGACTTCTACGAGCCACGCACGGTTCACGAATCGAGCTTGTCACCATGTGTCTACTCGATCATTGCG GCAGAAGTCGGTTATGAAGACAAAGCGGTCGAATTGTACCAACGTTCGGCGCGCCTTGACCTCGACAACTATAACAATGA CACGGAAGACGGGTTGCACATCACATCGATGGTCGGTTCATGGATGTCCATCGTTCATGGGTTCGCCGGAATGCGCATTC AAGAGGATAACCTCTCGTTCAGTCCGATGATTCCGAAAGATTGGAACGGTTACTCGTTCAACATGCTCTGGCGCGGCCAT CACTTGACGGTCACATCATCACGTGAACAAGTGACGATCAAGCAAACAGGTGGTACAGATGTGACCATCCATGTATATGG AAATGCGGTAACGGTTCCTGCAAACGAATCGATTACAATTGAAACAGTGAAAGCGTGA
Upstream 100 bases:
>100_bases TGAAAGGTGAGATTAAATACAGCGCTTTCATAGACAAACGGTTGCATGAACTAGTTGTCCGTCGAAGGTAGCCTTGTAGA GAAAAAGGAGTGGCAGACAG
Downstream 100 bases:
>100_bases CCAATCGTTTCATACGAACAAGTCGACCTCGGTCGGCTTGTTTTTGTATGAAAAACTTATCGGATTTCCTGCATATTTGC TGTATGCAGCATGAATAATC
Product: maltose phosphorylase
Products: D-glucose; beta-D-glucose 1-phosphate
Alternate protein names: NA
Number of amino acids: Translated: 765; Mature: 765
Protein sequence:
>765_residues MKRLFAVDEWKVTEEGLHPKENRLAESITSLGNGHMGMRGNFEEDYSNDTHQGFYVAGVYYPDKTRVGWWKNGYPEYFAK VLNATNVIGLRVVINGTPVDLAKWEVRDFTRELDMQRGVLTRTFTLMNGTEETKVEVVRFFSIVDKEILAIRYNVTPVNY EAKIEFTPYLDGDVVNEDSNYDEKFWLPVDRGVEERFAFVTTKTKKLDWHVTASMIADVEGARCEVLEATDLFVANKFTV NVAAGETATAYKYVSVVTNRDHEIEALQSAGMTRVEAAFEKGFETLLAEQTEAWLARWEDADVRIDGDIEAQQGIRFNIF NMYQTYTGEDSRLNIGPKGFTGEKYGGATYWDTEAYCLHFYLATAKPEVSWNLLKYRHNQLPQAKENAVKNVGMEGALYP MVTMNGEECHNEWEITHEEIHRNGAIAHAIFNYTNFTGDKSYLGQYGLEVLVEISRYWASRVNFVPHKDVYMILGVTGPN EYDNNVNNNWYTNLIAAWTLEYTQEVYNYLKDAEPARLEELVSTLGITDAELAKWADIQTKMYYPKDDLVPDVFMQQDGF MDKEQILVKDLDPKHLPLNQNWSWDRILRSNFIKQADVLQGLYTFGDRFTVEQKRANFDFYEPRTVHESSLSPCVYSIIA AEVGYEDKAVELYQRSARLDLDNYNNDTEDGLHITSMVGSWMSIVHGFAGMRIQEDNLSFSPMIPKDWNGYSFNMLWRGH HLTVTSSREQVTIKQTGGTDVTIHVYGNAVTVPANESITIETVKA
Sequences:
>Translated_765_residues MKRLFAVDEWKVTEEGLHPKENRLAESITSLGNGHMGMRGNFEEDYSNDTHQGFYVAGVYYPDKTRVGWWKNGYPEYFAK VLNATNVIGLRVVINGTPVDLAKWEVRDFTRELDMQRGVLTRTFTLMNGTEETKVEVVRFFSIVDKEILAIRYNVTPVNY EAKIEFTPYLDGDVVNEDSNYDEKFWLPVDRGVEERFAFVTTKTKKLDWHVTASMIADVEGARCEVLEATDLFVANKFTV NVAAGETATAYKYVSVVTNRDHEIEALQSAGMTRVEAAFEKGFETLLAEQTEAWLARWEDADVRIDGDIEAQQGIRFNIF NMYQTYTGEDSRLNIGPKGFTGEKYGGATYWDTEAYCLHFYLATAKPEVSWNLLKYRHNQLPQAKENAVKNVGMEGALYP MVTMNGEECHNEWEITHEEIHRNGAIAHAIFNYTNFTGDKSYLGQYGLEVLVEISRYWASRVNFVPHKDVYMILGVTGPN EYDNNVNNNWYTNLIAAWTLEYTQEVYNYLKDAEPARLEELVSTLGITDAELAKWADIQTKMYYPKDDLVPDVFMQQDGF MDKEQILVKDLDPKHLPLNQNWSWDRILRSNFIKQADVLQGLYTFGDRFTVEQKRANFDFYEPRTVHESSLSPCVYSIIA AEVGYEDKAVELYQRSARLDLDNYNNDTEDGLHITSMVGSWMSIVHGFAGMRIQEDNLSFSPMIPKDWNGYSFNMLWRGH HLTVTSSREQVTIKQTGGTDVTIHVYGNAVTVPANESITIETVKA >Mature_765_residues MKRLFAVDEWKVTEEGLHPKENRLAESITSLGNGHMGMRGNFEEDYSNDTHQGFYVAGVYYPDKTRVGWWKNGYPEYFAK VLNATNVIGLRVVINGTPVDLAKWEVRDFTRELDMQRGVLTRTFTLMNGTEETKVEVVRFFSIVDKEILAIRYNVTPVNY EAKIEFTPYLDGDVVNEDSNYDEKFWLPVDRGVEERFAFVTTKTKKLDWHVTASMIADVEGARCEVLEATDLFVANKFTV NVAAGETATAYKYVSVVTNRDHEIEALQSAGMTRVEAAFEKGFETLLAEQTEAWLARWEDADVRIDGDIEAQQGIRFNIF NMYQTYTGEDSRLNIGPKGFTGEKYGGATYWDTEAYCLHFYLATAKPEVSWNLLKYRHNQLPQAKENAVKNVGMEGALYP MVTMNGEECHNEWEITHEEIHRNGAIAHAIFNYTNFTGDKSYLGQYGLEVLVEISRYWASRVNFVPHKDVYMILGVTGPN EYDNNVNNNWYTNLIAAWTLEYTQEVYNYLKDAEPARLEELVSTLGITDAELAKWADIQTKMYYPKDDLVPDVFMQQDGF MDKEQILVKDLDPKHLPLNQNWSWDRILRSNFIKQADVLQGLYTFGDRFTVEQKRANFDFYEPRTVHESSLSPCVYSIIA AEVGYEDKAVELYQRSARLDLDNYNNDTEDGLHITSMVGSWMSIVHGFAGMRIQEDNLSFSPMIPKDWNGYSFNMLWRGH HLTVTSSREQVTIKQTGGTDVTIHVYGNAVTVPANESITIETVKA
Specific function: Unknown
COG id: COG1554
COG function: function code G; Trehalose and maltose hydrolases (possible phosphorylases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 65 family [H]
Homologues:
Organism=Homo sapiens, GI187829418, Length=515, Percent_Identity=23.1067961165049, Blast_Score=100, Evalue=7e-21, Organism=Escherichia coli, GI1787575, Length=756, Percent_Identity=28.7037037037037, Blast_Score=291, Evalue=1e-79, Organism=Saccharomyces cerevisiae, GI6325283, Length=524, Percent_Identity=22.3282442748092, Blast_Score=92, Evalue=3e-19, Organism=Drosophila melanogaster, GI24583760, Length=276, Percent_Identity=25, Blast_Score=69, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR011013 - InterPro: IPR005194 - InterPro: IPR005195 - InterPro: IPR005196 - InterPro: IPR017045 [H]
Pfam domain/function: PF03633 Glyco_hydro_65C; PF03632 Glyco_hydro_65m; PF03636 Glyco_hydro_65N [H]
EC number: 2.4.1.8
Molecular weight: Translated: 87689; Mature: 87689
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLFAVDEWKVTEEGLHPKENRLAESITSLGNGHMGMRGNFEEDYSNDTHQGFYVAGVY CCCEEECCCCCCHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCEEEEEEE YPDKTRVGWWKNGYPEYFAKVLNATNVIGLRVVINGTPVDLAKWEVRDFTRELDMQRGVL ECCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCE TRTFTLMNGTEETKVEVVRFFSIVDKEILAIRYNVTPVNYEAKIEFTPYLDGDVVNEDSN EEEEEEECCCCHHHHHHHHHHHHHCCEEEEEEEECCCCCEEEEEEECCCCCCCEECCCCC YDEKFWLPVDRGVEERFAFVTTKTKKLDWHVTASMIADVEGARCEVLEATDLFVANKFTV CCCEEEEECCCCCCHHEEEEEEECEEEEEEEEHHHHHCCCCCEEEEEEECCEEEEEEEEE NVAAGETATAYKYVSVVTNRDHEIEALQSAGMTRVEAAFEKGFETLLAEQTEAWLARWED EEECCCCHHHEEEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC ADVRIDGDIEAQQGIRFNIFNMYQTYTGEDSRLNIGPKGFTGEKYGGATYWDTEAYCLHF CCEEECCCCCCCCCCEEEEEEEEEEECCCCCEEECCCCCCCCCCCCCCEEECCCEEEEEE YLATAKPEVSWNLLKYRHNQLPQAKENAVKNVGMEGALYPMVTMNGEECHNEWEITHEEI EEEECCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEEECCHHHCCCCCCCHHHH HRNGAIAHAIFNYTNFTGDKSYLGQYGLEVLVEISRYWASRVNFVPHKDVYMILGVTGPN HCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCC EYDNNVNNNWYTNLIAAWTLEYTQEVYNYLKDAEPARLEELVSTLGITDAELAKWADIQT CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHCCCE KMYYPKDDLVPDVFMQQDGFMDKEQILVKDLDPKHLPLNQNWSWDRILRSNFIKQADVLQ EEECCCCCCCCHHHHHCCCCCCHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH GLYTFGDRFTVEQKRANFDFYEPRTVHESSLSPCVYSIIAAEVGYEDKAVELYQRSARLD HHHHCCCCEEEEHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCC LDNYNNDTEDGLHITSMVGSWMSIVHGFAGMRIQEDNLSFSPMIPKDWNGYSFNMLWRGH CCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCEEEEEEEECE HLTVTSSREQVTIKQTGGTDVTIHVYGNAVTVPANESITIETVKA EEEEECCCCEEEEEECCCCEEEEEEECCEEEECCCCCEEEEEECC >Mature Secondary Structure MKRLFAVDEWKVTEEGLHPKENRLAESITSLGNGHMGMRGNFEEDYSNDTHQGFYVAGVY CCCEEECCCCCCHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCEEEEEEE YPDKTRVGWWKNGYPEYFAKVLNATNVIGLRVVINGTPVDLAKWEVRDFTRELDMQRGVL ECCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCE TRTFTLMNGTEETKVEVVRFFSIVDKEILAIRYNVTPVNYEAKIEFTPYLDGDVVNEDSN EEEEEEECCCCHHHHHHHHHHHHHCCEEEEEEEECCCCCEEEEEEECCCCCCCEECCCCC YDEKFWLPVDRGVEERFAFVTTKTKKLDWHVTASMIADVEGARCEVLEATDLFVANKFTV CCCEEEEECCCCCCHHEEEEEEECEEEEEEEEHHHHHCCCCCEEEEEEECCEEEEEEEEE NVAAGETATAYKYVSVVTNRDHEIEALQSAGMTRVEAAFEKGFETLLAEQTEAWLARWED EEECCCCHHHEEEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC ADVRIDGDIEAQQGIRFNIFNMYQTYTGEDSRLNIGPKGFTGEKYGGATYWDTEAYCLHF CCEEECCCCCCCCCCEEEEEEEEEEECCCCCEEECCCCCCCCCCCCCCEEECCCEEEEEE YLATAKPEVSWNLLKYRHNQLPQAKENAVKNVGMEGALYPMVTMNGEECHNEWEITHEEI EEEECCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEEECCHHHCCCCCCCHHHH HRNGAIAHAIFNYTNFTGDKSYLGQYGLEVLVEISRYWASRVNFVPHKDVYMILGVTGPN HCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCC EYDNNVNNNWYTNLIAAWTLEYTQEVYNYLKDAEPARLEELVSTLGITDAELAKWADIQT CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHCCCE KMYYPKDDLVPDVFMQQDGFMDKEQILVKDLDPKHLPLNQNWSWDRILRSNFIKQADVLQ EEECCCCCCCCHHHHHCCCCCCHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH GLYTFGDRFTVEQKRANFDFYEPRTVHESSLSPCVYSIIAAEVGYEDKAVELYQRSARLD HHHHCCCCEEEEHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCC LDNYNNDTEDGLHITSMVGSWMSIVHGFAGMRIQEDNLSFSPMIPKDWNGYSFNMLWRGH CCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCEEEEEEEECE HLTVTSSREQVTIKQTGGTDVTIHVYGNAVTVPANESITIETVKA EEEEECCCCEEEEEECCCCEEEEEEECCEEEECCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: maltose; phosphate
Specific reaction: maltose + phosphate = D-glucose + beta-D-glucose 1-phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]