| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is paaG [H]
Identifier: 229918219
GI number: 229918219
Start: 2461552
End: 2462286
Strand: Direct
Name: paaG [H]
Synonym: EAT1b_2499
Alternate gene names: 229918219
Gene position: 2461552-2462286 (Clockwise)
Preceding gene: 229918212
Following gene: 229918222
Centisome position: 82.05
GC content: 53.88
Gene sequence:
>735_bases GTGGAGATGATTCAATTGACGACACACAATGGGGTAGGGTGGTTGAAACTGAACCGACCTGAAAAGCTGAACGCCTTGAA CGAGACGTTGCTTCGTGAAATGAAAACGGCAATCGACACATTTGAACAGGACGACGCCGTTCGCGTCATCGTCCTTGTCG GTGAGGGACGAGCGTTCTCATCCGGACAAGATTTAACGATTGAGAGCGATGCGGACTATGGGGAATATCTAGAAGACGTG TATCATCCGCTCGTACGTGCACTTTTCTCGAGTCGTAAACCGCTCATCGCAGGGATTCACGGTGTCGTGGCTGGAGCAGG ACTCAGCTTGGCACTCGCGGCAGACGTTCGAATCGTCGCCAAGTCGACGAAGTTCAGCTCGGCGTTTATTAAAATCGGGT TGGTCGCGGATGCGGGCGGTCCATATCACCTGCGTCGACTCATGCGCGACGACCTCGCGTTAGATTGGCTCTGGAGTGGC AGTACGATTGACTCGGAGGCCGCGCGTACATTCGGGCTCGTCACCGAGCTCGTGGAAGATGCGATGTATACGGAGCGATT GACTTCATATGCGGAGACACTCGCTGCGAAATCATCGGTCGCTGTTCAAGGGATGAAGGCGCTCATGCGAGCCGCTTCAT TTGAGGATGGATTGAATGAAGAAATCGAATGGCAACGGAAGTGTGGGGACACGGACGTGCACCGCCAAGCGATGCAGGCA TTCTTGATGAAATGA
Upstream 100 bases:
>100_bases CTTCCCGGCAATTGAACTTCAAAAAACTTTTCAGTAAAGGAAGGAGTTTGAAGCAATGATGAAGAAATGAACAGTGATTC ATTTTGAAGGGGGAATGGAA
Downstream 100 bases:
>100_bases AAAAAGCGGCCGCGGCCGCTTTTTTACGTGGTTGATTTTGCTTCGAACTGGAAGCCTTTTTGTTGCCACGTCCCGTATTT CCAACGACGGAACGCGAAGA
Product: Enoyl-CoA hydratase/isomerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MEMIQLTTHNGVGWLKLNRPEKLNALNETLLREMKTAIDTFEQDDAVRVIVLVGEGRAFSSGQDLTIESDADYGEYLEDV YHPLVRALFSSRKPLIAGIHGVVAGAGLSLALAADVRIVAKSTKFSSAFIKIGLVADAGGPYHLRRLMRDDLALDWLWSG STIDSEAARTFGLVTELVEDAMYTERLTSYAETLAAKSSVAVQGMKALMRAASFEDGLNEEIEWQRKCGDTDVHRQAMQA FLMK
Sequences:
>Translated_244_residues MEMIQLTTHNGVGWLKLNRPEKLNALNETLLREMKTAIDTFEQDDAVRVIVLVGEGRAFSSGQDLTIESDADYGEYLEDV YHPLVRALFSSRKPLIAGIHGVVAGAGLSLALAADVRIVAKSTKFSSAFIKIGLVADAGGPYHLRRLMRDDLALDWLWSG STIDSEAARTFGLVTELVEDAMYTERLTSYAETLAAKSSVAVQGMKALMRAASFEDGLNEEIEWQRKCGDTDVHRQAMQA FLMK >Mature_244_residues MEMIQLTTHNGVGWLKLNRPEKLNALNETLLREMKTAIDTFEQDDAVRVIVLVGEGRAFSSGQDLTIESDADYGEYLEDV YHPLVRALFSSRKPLIAGIHGVVAGAGLSLALAADVRIVAKSTKFSSAFIKIGLVADAGGPYHLRRLMRDDLALDWLWSG STIDSEAARTFGLVTELVEDAMYTERLTSYAETLAAKSSVAVQGMKALMRAASFEDGLNEEIEWQRKCGDTDVHRQAMQA FLMK
Specific function: Could possibly oxidize fatty acids using specific components [H]
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=240, Percent_Identity=31.6666666666667, Blast_Score=119, Evalue=4e-27, Organism=Homo sapiens, GI70995211, Length=229, Percent_Identity=28.82096069869, Blast_Score=88, Evalue=7e-18, Organism=Homo sapiens, GI37594469, Length=215, Percent_Identity=27.906976744186, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI37594471, Length=215, Percent_Identity=27.906976744186, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI31542718, Length=201, Percent_Identity=25.8706467661692, Blast_Score=81, Evalue=8e-16, Organism=Homo sapiens, GI45643119, Length=216, Percent_Identity=25.9259259259259, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI260275230, Length=216, Percent_Identity=25.9259259259259, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI260274832, Length=216, Percent_Identity=25.9259259259259, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI68989263, Length=171, Percent_Identity=30.4093567251462, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI20127408, Length=199, Percent_Identity=27.6381909547739, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI1787660, Length=253, Percent_Identity=33.9920948616601, Blast_Score=122, Evalue=2e-29, Organism=Escherichia coli, GI1787659, Length=247, Percent_Identity=29.9595141700405, Blast_Score=108, Evalue=2e-25, Organism=Escherichia coli, GI221142681, Length=218, Percent_Identity=28.8990825688073, Blast_Score=88, Evalue=6e-19, Organism=Escherichia coli, GI1788597, Length=209, Percent_Identity=27.7511961722488, Blast_Score=78, Evalue=6e-16, Organism=Caenorhabditis elegans, GI17536985, Length=237, Percent_Identity=32.4894514767932, Blast_Score=103, Evalue=8e-23, Organism=Caenorhabditis elegans, GI17554946, Length=229, Percent_Identity=26.6375545851528, Blast_Score=97, Evalue=6e-21, Organism=Caenorhabditis elegans, GI25145438, Length=237, Percent_Identity=27.4261603375527, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17560910, Length=194, Percent_Identity=28.8659793814433, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17534483, Length=234, Percent_Identity=30.7692307692308, Blast_Score=89, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17540306, Length=179, Percent_Identity=31.2849162011173, Blast_Score=84, Evalue=6e-17, Organism=Caenorhabditis elegans, GI17549921, Length=210, Percent_Identity=25.7142857142857, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17535521, Length=254, Percent_Identity=25.1968503937008, Blast_Score=77, Evalue=6e-15, Organism=Caenorhabditis elegans, GI17540714, Length=225, Percent_Identity=25.7777777777778, Blast_Score=77, Evalue=9e-15, Organism=Caenorhabditis elegans, GI25144276, Length=200, Percent_Identity=29.5, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17508951, Length=210, Percent_Identity=29.5238095238095, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17508953, Length=200, Percent_Identity=29.5, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17558304, Length=200, Percent_Identity=26, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI25144157, Length=189, Percent_Identity=28.042328042328, Blast_Score=65, Evalue=2e-11, Organism=Caenorhabditis elegans, GI25144160, Length=189, Percent_Identity=28.042328042328, Blast_Score=65, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6320241, Length=189, Percent_Identity=23.2804232804233, Blast_Score=65, Evalue=7e-12, Organism=Drosophila melanogaster, GI20129971, Length=224, Percent_Identity=28.5714285714286, Blast_Score=106, Evalue=1e-23, Organism=Drosophila melanogaster, GI24653477, Length=224, Percent_Identity=28.5714285714286, Blast_Score=106, Evalue=1e-23, Organism=Drosophila melanogaster, GI19920382, Length=215, Percent_Identity=31.1627906976744, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI24654903, Length=185, Percent_Identity=25.4054054054054, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI24653139, Length=205, Percent_Identity=26.3414634146341, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI24650670, Length=170, Percent_Identity=32.9411764705882, Blast_Score=74, Evalue=9e-14, Organism=Drosophila melanogaster, GI21357171, Length=176, Percent_Identity=28.9772727272727, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI19922422, Length=206, Percent_Identity=24.2718446601942, Blast_Score=70, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001753 - InterPro: IPR011968 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.17 [H]
Molecular weight: Translated: 26887; Mature: 26887
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: PS00166 ENOYL_COA_HYDRATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEMIQLTTHNGVGWLKLNRPEKLNALNETLLREMKTAIDTFEQDDAVRVIVLVGEGRAFS CCEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCC SGQDLTIESDADYGEYLEDVYHPLVRALFSSRKPLIAGIHGVVAGAGLSLALAADVRIVA CCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEHHHCEEEEE KSTKFSSAFIKIGLVADAGGPYHLRRLMRDDLALDWLWSGSTIDSEAARTFGLVTELVED ECCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHHHH AMYTERLTSYAETLAAKSSVAVQGMKALMRAASFEDGLNEEIEWQRKCGDTDVHRQAMQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHH FLMK HHCC >Mature Secondary Structure MEMIQLTTHNGVGWLKLNRPEKLNALNETLLREMKTAIDTFEQDDAVRVIVLVGEGRAFS CCEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCC SGQDLTIESDADYGEYLEDVYHPLVRALFSSRKPLIAGIHGVVAGAGLSLALAADVRIVA CCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEHHHCEEEEE KSTKFSSAFIKIGLVADAGGPYHLRRLMRDDLALDWLWSGSTIDSEAARTFGLVTELVED ECCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHHHH AMYTERLTSYAETLAAKSSVAVQGMKALMRAASFEDGLNEEIEWQRKCGDTDVHRQAMQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHH FLMK HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9748275; 9097039; 9278503; 10766858 [H]