Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is 229918075

Identifier: 229918075

GI number: 229918075

Start: 2308573

End: 2309217

Strand: Direct

Name: 229918075

Synonym: EAT1b_2354

Alternate gene names: NA

Gene position: 2308573-2309217 (Clockwise)

Preceding gene: 229918074

Following gene: 229918076

Centisome position: 76.96

GC content: 44.65

Gene sequence:

>645_bases
ATGAAGACACCGTTTGATCAGTTTCGTGAATTAGCGAATGAATTGACGAAAGAAATTTCGAAAGAAGTGAAGAAATACCA
GGATAAAGAGATGCCACGTTCAAGTGGAGAAGCGGAATTGAACCGTCATATCCGTGGAGCGGAGAAGGAAGCGTTGTCGG
TTGAACGACTCGTGGAACGTCAACGTACATTGCTTGCAGAACTTGCTGAAAAACGTGATGATGCCAAGAAGATGGCAGAT
AAACGATATGAGCAGACAGAACTGGCGAAACAAGCCGGGGAAGAAAAGTTGGCAGAACGTGCGGCACTCGAATCCAAACA
CTACGGGGAACAGTACCGTTACTTTGAAGGATTGATTGACGAGGGTGAGCGCGAGTTGGATACATTAGAGCGTCGTGCGC
TCGAGATGAAACTCAAACTCGATGAGATGCAAAATAAACGTTATGAGTTTGCGATGCGCGAAAACCTAGACTTGTTAAAA
GGGGCACTCGACCAAATCTTTGGTCAAAATACGTCTCAGTCTCATCCGTTCACTGAGGAAGACAAGAAAGAACAACCTGT
TGAAGAGAAGCAAGACACACAGGAAGATGAAGATGATTTTGAAGCAAAATTGAAAGAACTGGAGCGTCGCTTTAAACAAG
AGTGA

Upstream 100 bases:

>100_bases
GCCGACGGAACGCGTGCTAGCCGTAGCAGCTTCCAACAGTTCGATCAAGTGTGGCAAAAATTTGTTAATCGTCGTTGAGA
TTTCATAAGGAGGATTCACC

Downstream 100 bases:

>100_bases
GGTGACGGTTCGGCGATGACCTGAACAAGGTCATCGCTTTCTTTGCTTCATACATATGAACAGAAAGGGGGAATGGACAT
GGAACGTTGGAACACACGTC

Product: PspA/IM30 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MKTPFDQFRELANELTKEISKEVKKYQDKEMPRSSGEAELNRHIRGAEKEALSVERLVERQRTLLAELAEKRDDAKKMAD
KRYEQTELAKQAGEEKLAERAALESKHYGEQYRYFEGLIDEGERELDTLERRALEMKLKLDEMQNKRYEFAMRENLDLLK
GALDQIFGQNTSQSHPFTEEDKKEQPVEEKQDTQEDEDDFEAKLKELERRFKQE

Sequences:

>Translated_214_residues
MKTPFDQFRELANELTKEISKEVKKYQDKEMPRSSGEAELNRHIRGAEKEALSVERLVERQRTLLAELAEKRDDAKKMAD
KRYEQTELAKQAGEEKLAERAALESKHYGEQYRYFEGLIDEGERELDTLERRALEMKLKLDEMQNKRYEFAMRENLDLLK
GALDQIFGQNTSQSHPFTEEDKKEQPVEEKQDTQEDEDDFEAKLKELERRFKQE
>Mature_214_residues
MKTPFDQFRELANELTKEISKEVKKYQDKEMPRSSGEAELNRHIRGAEKEALSVERLVERQRTLLAELAEKRDDAKKMAD
KRYEQTELAKQAGEEKLAERAALESKHYGEQYRYFEGLIDEGERELDTLERRALEMKLKLDEMQNKRYEFAMRENLDLLK
GALDQIFGQNTSQSHPFTEEDKKEQPVEEKQDTQEDEDDFEAKLKELERRFKQE

Specific function: Unknown

COG id: COG1842

COG function: function code KT; Phage shock protein A (IM30), suppresses sigma54-dependent transcription

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25440; Mature: 25440

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTPFDQFRELANELTKEISKEVKKYQDKEMPRSSGEAELNRHIRGAEKEALSVERLVER
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHH
QRTLLAELAEKRDDAKKMADKRYEQTELAKQAGEEKLAERAALESKHYGEQYRYFEGLID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EGERELDTLERRALEMKLKLDEMQNKRYEFAMRENLDLLKGALDQIFGQNTSQSHPFTEE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
DKKEQPVEEKQDTQEDEDDFEAKLKELERRFKQE
HHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKTPFDQFRELANELTKEISKEVKKYQDKEMPRSSGEAELNRHIRGAEKEALSVERLVER
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHH
QRTLLAELAEKRDDAKKMADKRYEQTELAKQAGEEKLAERAALESKHYGEQYRYFEGLID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EGERELDTLERRALEMKLKLDEMQNKRYEFAMRENLDLLKGALDQIFGQNTSQSHPFTEE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
DKKEQPVEEKQDTQEDEDDFEAKLKELERRFKQE
HHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA