| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is yceE [C]
Identifier: 229918058
GI number: 229918058
Start: 2291441
End: 2292586
Strand: Direct
Name: yceE [C]
Synonym: EAT1b_2337
Alternate gene names: 229918058
Gene position: 2291441-2292586 (Clockwise)
Preceding gene: 229918057
Following gene: 229918059
Centisome position: 76.38
GC content: 48.69
Gene sequence:
>1146_bases ATGAAAACTCCACCACGTTTTATATTATATGCCATCGTATTTTTTGCCTTTTTTGATTTGTTCGCCCAACTTCCGATCAT GAGCACGTTTGCGGTATCCGTTGGGGCATCTTCGTTTATCGCTGGCTTGTCCATTGCGATCTATTCGTTGACGAACACGT TTGGAAATATGTTATCCGGTATATGGACTGACAGGAGTGGTCCGTATCGGGTCTTGGTTCTCGGCTTGTTTCTGACGAGC TTCAGTTTACTGGCTTATCAATTCGTCGACTCAGCATCCATGTTGCTGTTTGTACGGTGTGTTCACGGCTTTATGGCCGG GCTCATCGTCCCAGCTGCATTTACGCTGTCGGCGAACGTCACTGCGATGAACCGTCAAGGAAAGAAAGTCGCCATTACCG GTAGTTTCGTCGGGTTAGCTGCCATCATCGGCCCAGCGTTCAGCGGGATCGTCGCAAGCATCACATCGCCACCGACTGTC TTTTTATTCGTCTCTTTATTCGGTTGGGTGATTCTCGTCGTGACGATTGTGACGATGCGAGGAAGTCAAACGGTCGAGAC AATAAGAGAAAAAGAGAGAACACGGGAAAAGCCGGATCCGAAAGTGATTCGGGCCTATTGGGGTGCTTTCTTCCTCATGT TTTCTCAAGGGGCACTCGCCTTTTTACTACCGCTCCACGTACAGGAACTTGGATACGATTCGAGGTTGAGCGGGACGCTA CTGAGTATGTTCGGCGTGGTCGCCGTCCTGTTCTTTTTATTACCGACGAATCGATTGTTCGATCGATTCTCGCCAACAAA GTTGACCGCACTTGGGGTGGCCATCATCGGGACGAGCCAGGTGTTAATTGGACAATCCGGTGTACAAACGAGCCTATATG GGGTACTTGCCTTATATGGCATCGGGTTTGCGATTTTATTCCCGGCCATCAATACGTTGTTGATTCAATCGACCTCTCCA CAAAATCGAGGAAAAGCATACGGGGCGTTTTATGCTTTTTTCTCTCTCGGAACGGTAGCGGGGTCATCATTTTTAAGTGT TCTTCCGCTCTCAATCGTTCAGCAGTTCACACTGACGGGCTTGATTTTAGGGAGCGCAAGTCTGCTCTTTCTCATCAGTG CGCGAAAAAGAGTACGGATGTTTTGA
Upstream 100 bases:
>100_bases GGCTGTAGGGATTTTTTGTGTCTAAACCCATTCATCCCTATGAAACGGTTGGAGCTCCAGCTAGACTAAGAATAAGATCA CGGGAAAGAGGAATTGTCCG
Downstream 100 bases:
>100_bases CACGAGGGAAGCAATCGATTACTCTATGATTAAACGTTTAAACATTTAAACTCTTTGTATGTAGTGAATCGATGAAAGCG TTTTTTTAGATTCGCTTTTC
Product: major facilitator superfamily MFS_1
Products: Proton [Cytoplasm]; drug [Periplasm] [C]
Alternate protein names: Multidrug-Efflux Transporter; Facilitator Superfamily Permease; Multidrug Efflux Transporter; Facilitator Superfamily Protein; Multidrug Resistance Protein; Permease Of Facilitator Superfamily; Multidrug ABC Transporter; Multi-Drug Resistance Efflux Pump PmrA; Multidrug Efflux Protein
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MKTPPRFILYAIVFFAFFDLFAQLPIMSTFAVSVGASSFIAGLSIAIYSLTNTFGNMLSGIWTDRSGPYRVLVLGLFLTS FSLLAYQFVDSASMLLFVRCVHGFMAGLIVPAAFTLSANVTAMNRQGKKVAITGSFVGLAAIIGPAFSGIVASITSPPTV FLFVSLFGWVILVVTIVTMRGSQTVETIREKERTREKPDPKVIRAYWGAFFLMFSQGALAFLLPLHVQELGYDSRLSGTL LSMFGVVAVLFFLLPTNRLFDRFSPTKLTALGVAIIGTSQVLIGQSGVQTSLYGVLALYGIGFAILFPAINTLLIQSTSP QNRGKAYGAFYAFFSLGTVAGSSFLSVLPLSIVQQFTLTGLILGSASLLFLISARKRVRMF
Sequences:
>Translated_381_residues MKTPPRFILYAIVFFAFFDLFAQLPIMSTFAVSVGASSFIAGLSIAIYSLTNTFGNMLSGIWTDRSGPYRVLVLGLFLTS FSLLAYQFVDSASMLLFVRCVHGFMAGLIVPAAFTLSANVTAMNRQGKKVAITGSFVGLAAIIGPAFSGIVASITSPPTV FLFVSLFGWVILVVTIVTMRGSQTVETIREKERTREKPDPKVIRAYWGAFFLMFSQGALAFLLPLHVQELGYDSRLSGTL LSMFGVVAVLFFLLPTNRLFDRFSPTKLTALGVAIIGTSQVLIGQSGVQTSLYGVLALYGIGFAILFPAINTLLIQSTSP QNRGKAYGAFYAFFSLGTVAGSSFLSVLPLSIVQQFTLTGLILGSASLLFLISARKRVRMF >Mature_381_residues MKTPPRFILYAIVFFAFFDLFAQLPIMSTFAVSVGASSFIAGLSIAIYSLTNTFGNMLSGIWTDRSGPYRVLVLGLFLTS FSLLAYQFVDSASMLLFVRCVHGFMAGLIVPAAFTLSANVTAMNRQGKKVAITGSFVGLAAIIGPAFSGIVASITSPPTV FLFVSLFGWVILVVTIVTMRGSQTVETIREKERTREKPDPKVIRAYWGAFFLMFSQGALAFLLPLHVQELGYDSRLSGTL LSMFGVVAVLFFLLPTNRLFDRFSPTKLTALGVAIIGTSQVLIGQSGVQTSLYGVLALYGIGFAILFPAINTLLIQSTSP QNRGKAYGAFYAFFSLGTVAGSSFLSVLPLSIVQQFTLTGLILGSASLLFLISARKRVRMF
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41187; Mature: 41187
Theoretical pI: Translated: 10.78; Mature: 10.78
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTPPRFILYAIVFFAFFDLFAQLPIMSTFAVSVGASSFIAGLSIAIYSLTNTFGNMLSG CCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH IWTDRSGPYRVLVLGLFLTSFSLLAYQFVDSASMLLFVRCVHGFMAGLIVPAAFTLSANV HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCE TAMNRQGKKVAITGSFVGLAAIIGPAFSGIVASITSPPTVFLFVSLFGWVILVVTIVTMR EEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC GSQTVETIREKERTREKPDPKVIRAYWGAFFLMFSQGALAFLLPLHVQELGYDSRLSGTL CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHH LSMFGVVAVLFFLLPTNRLFDRFSPTKLTALGVAIIGTSQVLIGQSGVQTSLYGVLALYG HHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHEECCCEEEECCCCCHHHHHHHHHHHH IGFAILFPAINTLLIQSTSPQNRGKAYGAFYAFFSLGTVAGSSFLSVLPLSIVQQFTLTG HHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LILGSASLLFLISARKRVRMF HHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKTPPRFILYAIVFFAFFDLFAQLPIMSTFAVSVGASSFIAGLSIAIYSLTNTFGNMLSG CCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH IWTDRSGPYRVLVLGLFLTSFSLLAYQFVDSASMLLFVRCVHGFMAGLIVPAAFTLSANV HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCE TAMNRQGKKVAITGSFVGLAAIIGPAFSGIVASITSPPTVFLFVSLFGWVILVVTIVTMR EEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC GSQTVETIREKERTREKPDPKVIRAYWGAFFLMFSQGALAFLLPLHVQELGYDSRLSGTL CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHH LSMFGVVAVLFFLLPTNRLFDRFSPTKLTALGVAIIGTSQVLIGQSGVQTSLYGVLALYG HHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHEECCCEEEECCCCCHHHHHHHHHHHH IGFAILFPAINTLLIQSTSPQNRGKAYGAFYAFFSLGTVAGSSFLSVLPLSIVQQFTLTG HHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LILGSASLLFLISARKRVRMF HHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; drug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + drug [Cytoplasm] = Proton [Cytoplasm] + drug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA