Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is yceE [C]

Identifier: 229918058

GI number: 229918058

Start: 2291441

End: 2292586

Strand: Direct

Name: yceE [C]

Synonym: EAT1b_2337

Alternate gene names: 229918058

Gene position: 2291441-2292586 (Clockwise)

Preceding gene: 229918057

Following gene: 229918059

Centisome position: 76.38

GC content: 48.69

Gene sequence:

>1146_bases
ATGAAAACTCCACCACGTTTTATATTATATGCCATCGTATTTTTTGCCTTTTTTGATTTGTTCGCCCAACTTCCGATCAT
GAGCACGTTTGCGGTATCCGTTGGGGCATCTTCGTTTATCGCTGGCTTGTCCATTGCGATCTATTCGTTGACGAACACGT
TTGGAAATATGTTATCCGGTATATGGACTGACAGGAGTGGTCCGTATCGGGTCTTGGTTCTCGGCTTGTTTCTGACGAGC
TTCAGTTTACTGGCTTATCAATTCGTCGACTCAGCATCCATGTTGCTGTTTGTACGGTGTGTTCACGGCTTTATGGCCGG
GCTCATCGTCCCAGCTGCATTTACGCTGTCGGCGAACGTCACTGCGATGAACCGTCAAGGAAAGAAAGTCGCCATTACCG
GTAGTTTCGTCGGGTTAGCTGCCATCATCGGCCCAGCGTTCAGCGGGATCGTCGCAAGCATCACATCGCCACCGACTGTC
TTTTTATTCGTCTCTTTATTCGGTTGGGTGATTCTCGTCGTGACGATTGTGACGATGCGAGGAAGTCAAACGGTCGAGAC
AATAAGAGAAAAAGAGAGAACACGGGAAAAGCCGGATCCGAAAGTGATTCGGGCCTATTGGGGTGCTTTCTTCCTCATGT
TTTCTCAAGGGGCACTCGCCTTTTTACTACCGCTCCACGTACAGGAACTTGGATACGATTCGAGGTTGAGCGGGACGCTA
CTGAGTATGTTCGGCGTGGTCGCCGTCCTGTTCTTTTTATTACCGACGAATCGATTGTTCGATCGATTCTCGCCAACAAA
GTTGACCGCACTTGGGGTGGCCATCATCGGGACGAGCCAGGTGTTAATTGGACAATCCGGTGTACAAACGAGCCTATATG
GGGTACTTGCCTTATATGGCATCGGGTTTGCGATTTTATTCCCGGCCATCAATACGTTGTTGATTCAATCGACCTCTCCA
CAAAATCGAGGAAAAGCATACGGGGCGTTTTATGCTTTTTTCTCTCTCGGAACGGTAGCGGGGTCATCATTTTTAAGTGT
TCTTCCGCTCTCAATCGTTCAGCAGTTCACACTGACGGGCTTGATTTTAGGGAGCGCAAGTCTGCTCTTTCTCATCAGTG
CGCGAAAAAGAGTACGGATGTTTTGA

Upstream 100 bases:

>100_bases
GGCTGTAGGGATTTTTTGTGTCTAAACCCATTCATCCCTATGAAACGGTTGGAGCTCCAGCTAGACTAAGAATAAGATCA
CGGGAAAGAGGAATTGTCCG

Downstream 100 bases:

>100_bases
CACGAGGGAAGCAATCGATTACTCTATGATTAAACGTTTAAACATTTAAACTCTTTGTATGTAGTGAATCGATGAAAGCG
TTTTTTTAGATTCGCTTTTC

Product: major facilitator superfamily MFS_1

Products: Proton [Cytoplasm]; drug [Periplasm] [C]

Alternate protein names: Multidrug-Efflux Transporter; Facilitator Superfamily Permease; Multidrug Efflux Transporter; Facilitator Superfamily Protein; Multidrug Resistance Protein; Permease Of Facilitator Superfamily; Multidrug ABC Transporter; Multi-Drug Resistance Efflux Pump PmrA; Multidrug Efflux Protein

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MKTPPRFILYAIVFFAFFDLFAQLPIMSTFAVSVGASSFIAGLSIAIYSLTNTFGNMLSGIWTDRSGPYRVLVLGLFLTS
FSLLAYQFVDSASMLLFVRCVHGFMAGLIVPAAFTLSANVTAMNRQGKKVAITGSFVGLAAIIGPAFSGIVASITSPPTV
FLFVSLFGWVILVVTIVTMRGSQTVETIREKERTREKPDPKVIRAYWGAFFLMFSQGALAFLLPLHVQELGYDSRLSGTL
LSMFGVVAVLFFLLPTNRLFDRFSPTKLTALGVAIIGTSQVLIGQSGVQTSLYGVLALYGIGFAILFPAINTLLIQSTSP
QNRGKAYGAFYAFFSLGTVAGSSFLSVLPLSIVQQFTLTGLILGSASLLFLISARKRVRMF

Sequences:

>Translated_381_residues
MKTPPRFILYAIVFFAFFDLFAQLPIMSTFAVSVGASSFIAGLSIAIYSLTNTFGNMLSGIWTDRSGPYRVLVLGLFLTS
FSLLAYQFVDSASMLLFVRCVHGFMAGLIVPAAFTLSANVTAMNRQGKKVAITGSFVGLAAIIGPAFSGIVASITSPPTV
FLFVSLFGWVILVVTIVTMRGSQTVETIREKERTREKPDPKVIRAYWGAFFLMFSQGALAFLLPLHVQELGYDSRLSGTL
LSMFGVVAVLFFLLPTNRLFDRFSPTKLTALGVAIIGTSQVLIGQSGVQTSLYGVLALYGIGFAILFPAINTLLIQSTSP
QNRGKAYGAFYAFFSLGTVAGSSFLSVLPLSIVQQFTLTGLILGSASLLFLISARKRVRMF
>Mature_381_residues
MKTPPRFILYAIVFFAFFDLFAQLPIMSTFAVSVGASSFIAGLSIAIYSLTNTFGNMLSGIWTDRSGPYRVLVLGLFLTS
FSLLAYQFVDSASMLLFVRCVHGFMAGLIVPAAFTLSANVTAMNRQGKKVAITGSFVGLAAIIGPAFSGIVASITSPPTV
FLFVSLFGWVILVVTIVTMRGSQTVETIREKERTREKPDPKVIRAYWGAFFLMFSQGALAFLLPLHVQELGYDSRLSGTL
LSMFGVVAVLFFLLPTNRLFDRFSPTKLTALGVAIIGTSQVLIGQSGVQTSLYGVLALYGIGFAILFPAINTLLIQSTSP
QNRGKAYGAFYAFFSLGTVAGSSFLSVLPLSIVQQFTLTGLILGSASLLFLISARKRVRMF

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41187; Mature: 41187

Theoretical pI: Translated: 10.78; Mature: 10.78

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; drug [Cytoplasm] [C]

Specific reaction: Proton [Periplasm] + drug [Cytoplasm] = Proton [Cytoplasm] + drug [Periplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA