| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is yurO [H]
Identifier: 229918047
GI number: 229918047
Start: 2279387
End: 2280679
Strand: Direct
Name: yurO [H]
Synonym: EAT1b_2326
Alternate gene names: 229918047
Gene position: 2279387-2280679 (Clockwise)
Preceding gene: 229918046
Following gene: 229918048
Centisome position: 75.98
GC content: 46.71
Gene sequence:
>1293_bases ATGAAACGGAAGTGGAAATTGTCTACAGCGGTCATGACGGCTGGAATGGTCTTATCACTCGCGGCTTGCGGCGGCGGATC ACTCACGGACGAAGGTTCTTCTGAAGGAAATGCGGATGGCGGCGACAAAAAGGATGTCACGTTAAACGTCTTCCAATTCA AAGCGGAAATCGCGAAAGATCTTGAAGCGATGGCAAAAGAGTATGAAGAGGAGACGGGTGTGAAAGTCACGGTTCAAACC GTCGGTGGTGGAGCAGACTACGGTGCGGCCCTCAAATCACAATTCGCTTCAGGCAATGAACCAGATATCTTTAATAACGG TGGATTCACGGAAGCGCAGACATGGAAAGATAAACTCGAGGACCTCTCAAGCGAGAAGTGGGTCGGAGATTTGACAGAGG TCGCCAAAGAGCCGATGACGATGGACGGTAAATTGTACGGAATGCCAATGAACCTCGAAGGTTACGGATTCATCTATAAT AAAGAACTTTTTGAAAAAGCGGGAATCAAAGAGTTACCGAAAACACTCTCTGAACTGACAGATGCTGCTGAAAAACTTGA GCAAGCGGGAATCACACCGTTCTCTGTCGGTTATGCAGAGTTCTGGATTTTAGGGATTCACTTGTTGAACATTCCGATGG CGCAACAAGACGACCCGGATGCATTTATTCAAGCGCTCAATGAGAATAAAGCGAAGTTTGAAGACAATGAACAGTTCCAA GAGTTTTTGAAATTGTTTGATTTGACGATTAAATACGGAAACAAAAACCCGTTGACGACGGACTACAATACTCAAGTCAC ACAGTTCGCCCAAGGAGAGACGGCAATGCTCCAACAAGGGAACTGGGCACAACAAATGATCCTCGACGTAAATCCAGATA TGGAGATGGGCTTCGTCCCGATCCCAATCAATGACGATGCGGAGAAGATGGACCGACTTCCAGTCGGCGTCCCGAACAAC TGGGTCGTCAACAAAAACTCGAAGTATAAAGAAGAAGCGAAAGACTTCTTAGAGTGGATGGCGACGTCGGATACAGGGAA AGACTACATGGTCAACAAGTTCAAGTTCATCCCTGCCTTCAAGTCGATTGAAGCCAACGACCTTGGACCACTCGCAGACG ATATCTTGGCTTATTCGAATGAAGGGAAGACCATCTCTTGGAACTGGTTCAAGTATCCGGATGGTGCAGTGAATGAATAT GGTGCCCTTATGCAGGCATATGTCGGTGGACAAAAAACAGGTGAAGAGATGCTACAGGACTTCACGAAAGTATGGCAAGA CAAAGTGAAATAA
Upstream 100 bases:
>100_bases ATTTTCCACCCTATCCGTCAATTTTGACACCTACATTGTGGAAGCGTTTTCATTTAAAGTTGAGTTTGTAAAGATGGATA AGGTTAAGGGAGGAAATGAG
Downstream 100 bases:
>100_bases GCATGGCACAGACGGTGAAACGACCCCTTCACCGTCTGTGTTTTTTTTATGAAGAAATTGTCACAGGAATCCCATATAAA CTACACACATACCGGTGGGG
Product: extracellular solute-binding protein family 1
Products: ADP; phosphate; maltose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 430; Mature: 430
Protein sequence:
>430_residues MKRKWKLSTAVMTAGMVLSLAACGGGSLTDEGSSEGNADGGDKKDVTLNVFQFKAEIAKDLEAMAKEYEEETGVKVTVQT VGGGADYGAALKSQFASGNEPDIFNNGGFTEAQTWKDKLEDLSSEKWVGDLTEVAKEPMTMDGKLYGMPMNLEGYGFIYN KELFEKAGIKELPKTLSELTDAAEKLEQAGITPFSVGYAEFWILGIHLLNIPMAQQDDPDAFIQALNENKAKFEDNEQFQ EFLKLFDLTIKYGNKNPLTTDYNTQVTQFAQGETAMLQQGNWAQQMILDVNPDMEMGFVPIPINDDAEKMDRLPVGVPNN WVVNKNSKYKEEAKDFLEWMATSDTGKDYMVNKFKFIPAFKSIEANDLGPLADDILAYSNEGKTISWNWFKYPDGAVNEY GALMQAYVGGQKTGEEMLQDFTKVWQDKVK
Sequences:
>Translated_430_residues MKRKWKLSTAVMTAGMVLSLAACGGGSLTDEGSSEGNADGGDKKDVTLNVFQFKAEIAKDLEAMAKEYEEETGVKVTVQT VGGGADYGAALKSQFASGNEPDIFNNGGFTEAQTWKDKLEDLSSEKWVGDLTEVAKEPMTMDGKLYGMPMNLEGYGFIYN KELFEKAGIKELPKTLSELTDAAEKLEQAGITPFSVGYAEFWILGIHLLNIPMAQQDDPDAFIQALNENKAKFEDNEQFQ EFLKLFDLTIKYGNKNPLTTDYNTQVTQFAQGETAMLQQGNWAQQMILDVNPDMEMGFVPIPINDDAEKMDRLPVGVPNN WVVNKNSKYKEEAKDFLEWMATSDTGKDYMVNKFKFIPAFKSIEANDLGPLADDILAYSNEGKTISWNWFKYPDGAVNEY GALMQAYVGGQKTGEEMLQDFTKVWQDKVK >Mature_430_residues MKRKWKLSTAVMTAGMVLSLAACGGGSLTDEGSSEGNADGGDKKDVTLNVFQFKAEIAKDLEAMAKEYEEETGVKVTVQT VGGGADYGAALKSQFASGNEPDIFNNGGFTEAQTWKDKLEDLSSEKWVGDLTEVAKEPMTMDGKLYGMPMNLEGYGFIYN KELFEKAGIKELPKTLSELTDAAEKLEQAGITPFSVGYAEFWILGIHLLNIPMAQQDDPDAFIQALNENKAKFEDNEQFQ EFLKLFDLTIKYGNKNPLTTDYNTQVTQFAQGETAMLQQGNWAQQMILDVNPDMEMGFVPIPINDDAEKMDRLPVGVPNN WVVNKNSKYKEEAKDFLEWMATSDTGKDYMVNKFKFIPAFKSIEANDLGPLADDILAYSNEGKTISWNWFKYPDGAVNEY GALMQAYVGGQKTGEEMLQDFTKVWQDKVK
Specific function: Probably part of the binding-protein-dependent transport system yurMNO [H]
COG id: COG1653
COG function: function code G; ABC-type sugar transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: 660 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 720 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase,
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 47885; Mature: 47885
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01037 SBP_BACTERIAL_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRKWKLSTAVMTAGMVLSLAACGGGSLTDEGSSEGNADGGDKKDVTLNVFQFKAEIAKD CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHH LEAMAKEYEEETGVKVTVQTVGGGADYGAALKSQFASGNEPDIFNNGGFTEAQTWKDKLE HHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH DLSSEKWVGDLTEVAKEPMTMDGKLYGMPMNLEGYGFIYNKELFEKAGIKELPKTLSELT HCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCEEEECHHHHHHCCHHHHHHHHHHHH DAAEKLEQAGITPFSVGYAEFWILGIHLLNIPMAQQDDPDAFIQALNENKAKFEDNEQFQ HHHHHHHHCCCCCEECHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHH EFLKLFDLTIKYGNKNPLTTDYNTQVTQFAQGETAMLQQGNWAQQMILDVNPDMEMGFVP HHHHHHHHHEEECCCCCCCCCCCCHHHHHHCCCHHHHCCCCHHHHEEEECCCCCCCCEEE IPINDDAEKMDRLPVGVPNNWVVNKNSKYKEEAKDFLEWMATSDTGKDYMVNKFKFIPAF ECCCCCHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHEEECCHH KSIEANDLGPLADDILAYSNEGKTISWNWFKYPDGAVNEYGALMQAYVGGQKTGEEMLQD HCCCCCCCCCHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHH FTKVWQDKVK HHHHHHHHCC >Mature Secondary Structure MKRKWKLSTAVMTAGMVLSLAACGGGSLTDEGSSEGNADGGDKKDVTLNVFQFKAEIAKD CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHH LEAMAKEYEEETGVKVTVQTVGGGADYGAALKSQFASGNEPDIFNNGGFTEAQTWKDKLE HHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH DLSSEKWVGDLTEVAKEPMTMDGKLYGMPMNLEGYGFIYNKELFEKAGIKELPKTLSELT HCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCEEEECHHHHHHCCHHHHHHHHHHHH DAAEKLEQAGITPFSVGYAEFWILGIHLLNIPMAQQDDPDAFIQALNENKAKFEDNEQFQ HHHHHHHHCCCCCEECHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHH EFLKLFDLTIKYGNKNPLTTDYNTQVTQFAQGETAMLQQGNWAQQMILDVNPDMEMGFVP HHHHHHHHHEEECCCCCCCCCCCCHHHHHHCCCHHHHCCCCHHHHEEEECCCCCCCCEEE IPINDDAEKMDRLPVGVPNNWVVNKNSKYKEEAKDFLEWMATSDTGKDYMVNKFKFIPAF ECCCCCHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHEEECCHH KSIEANDLGPLADDILAYSNEGKTISWNWFKYPDGAVNEYGALMQAYVGGQKTGEEMLQD HCCCCCCCCCHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHH FTKVWQDKVK HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; maltose [Periplasm]; H2O [C]
Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]