Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is yurO [H]

Identifier: 229918047

GI number: 229918047

Start: 2279387

End: 2280679

Strand: Direct

Name: yurO [H]

Synonym: EAT1b_2326

Alternate gene names: 229918047

Gene position: 2279387-2280679 (Clockwise)

Preceding gene: 229918046

Following gene: 229918048

Centisome position: 75.98

GC content: 46.71

Gene sequence:

>1293_bases
ATGAAACGGAAGTGGAAATTGTCTACAGCGGTCATGACGGCTGGAATGGTCTTATCACTCGCGGCTTGCGGCGGCGGATC
ACTCACGGACGAAGGTTCTTCTGAAGGAAATGCGGATGGCGGCGACAAAAAGGATGTCACGTTAAACGTCTTCCAATTCA
AAGCGGAAATCGCGAAAGATCTTGAAGCGATGGCAAAAGAGTATGAAGAGGAGACGGGTGTGAAAGTCACGGTTCAAACC
GTCGGTGGTGGAGCAGACTACGGTGCGGCCCTCAAATCACAATTCGCTTCAGGCAATGAACCAGATATCTTTAATAACGG
TGGATTCACGGAAGCGCAGACATGGAAAGATAAACTCGAGGACCTCTCAAGCGAGAAGTGGGTCGGAGATTTGACAGAGG
TCGCCAAAGAGCCGATGACGATGGACGGTAAATTGTACGGAATGCCAATGAACCTCGAAGGTTACGGATTCATCTATAAT
AAAGAACTTTTTGAAAAAGCGGGAATCAAAGAGTTACCGAAAACACTCTCTGAACTGACAGATGCTGCTGAAAAACTTGA
GCAAGCGGGAATCACACCGTTCTCTGTCGGTTATGCAGAGTTCTGGATTTTAGGGATTCACTTGTTGAACATTCCGATGG
CGCAACAAGACGACCCGGATGCATTTATTCAAGCGCTCAATGAGAATAAAGCGAAGTTTGAAGACAATGAACAGTTCCAA
GAGTTTTTGAAATTGTTTGATTTGACGATTAAATACGGAAACAAAAACCCGTTGACGACGGACTACAATACTCAAGTCAC
ACAGTTCGCCCAAGGAGAGACGGCAATGCTCCAACAAGGGAACTGGGCACAACAAATGATCCTCGACGTAAATCCAGATA
TGGAGATGGGCTTCGTCCCGATCCCAATCAATGACGATGCGGAGAAGATGGACCGACTTCCAGTCGGCGTCCCGAACAAC
TGGGTCGTCAACAAAAACTCGAAGTATAAAGAAGAAGCGAAAGACTTCTTAGAGTGGATGGCGACGTCGGATACAGGGAA
AGACTACATGGTCAACAAGTTCAAGTTCATCCCTGCCTTCAAGTCGATTGAAGCCAACGACCTTGGACCACTCGCAGACG
ATATCTTGGCTTATTCGAATGAAGGGAAGACCATCTCTTGGAACTGGTTCAAGTATCCGGATGGTGCAGTGAATGAATAT
GGTGCCCTTATGCAGGCATATGTCGGTGGACAAAAAACAGGTGAAGAGATGCTACAGGACTTCACGAAAGTATGGCAAGA
CAAAGTGAAATAA

Upstream 100 bases:

>100_bases
ATTTTCCACCCTATCCGTCAATTTTGACACCTACATTGTGGAAGCGTTTTCATTTAAAGTTGAGTTTGTAAAGATGGATA
AGGTTAAGGGAGGAAATGAG

Downstream 100 bases:

>100_bases
GCATGGCACAGACGGTGAAACGACCCCTTCACCGTCTGTGTTTTTTTTATGAAGAAATTGTCACAGGAATCCCATATAAA
CTACACACATACCGGTGGGG

Product: extracellular solute-binding protein family 1

Products: ADP; phosphate; maltose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MKRKWKLSTAVMTAGMVLSLAACGGGSLTDEGSSEGNADGGDKKDVTLNVFQFKAEIAKDLEAMAKEYEEETGVKVTVQT
VGGGADYGAALKSQFASGNEPDIFNNGGFTEAQTWKDKLEDLSSEKWVGDLTEVAKEPMTMDGKLYGMPMNLEGYGFIYN
KELFEKAGIKELPKTLSELTDAAEKLEQAGITPFSVGYAEFWILGIHLLNIPMAQQDDPDAFIQALNENKAKFEDNEQFQ
EFLKLFDLTIKYGNKNPLTTDYNTQVTQFAQGETAMLQQGNWAQQMILDVNPDMEMGFVPIPINDDAEKMDRLPVGVPNN
WVVNKNSKYKEEAKDFLEWMATSDTGKDYMVNKFKFIPAFKSIEANDLGPLADDILAYSNEGKTISWNWFKYPDGAVNEY
GALMQAYVGGQKTGEEMLQDFTKVWQDKVK

Sequences:

>Translated_430_residues
MKRKWKLSTAVMTAGMVLSLAACGGGSLTDEGSSEGNADGGDKKDVTLNVFQFKAEIAKDLEAMAKEYEEETGVKVTVQT
VGGGADYGAALKSQFASGNEPDIFNNGGFTEAQTWKDKLEDLSSEKWVGDLTEVAKEPMTMDGKLYGMPMNLEGYGFIYN
KELFEKAGIKELPKTLSELTDAAEKLEQAGITPFSVGYAEFWILGIHLLNIPMAQQDDPDAFIQALNENKAKFEDNEQFQ
EFLKLFDLTIKYGNKNPLTTDYNTQVTQFAQGETAMLQQGNWAQQMILDVNPDMEMGFVPIPINDDAEKMDRLPVGVPNN
WVVNKNSKYKEEAKDFLEWMATSDTGKDYMVNKFKFIPAFKSIEANDLGPLADDILAYSNEGKTISWNWFKYPDGAVNEY
GALMQAYVGGQKTGEEMLQDFTKVWQDKVK
>Mature_430_residues
MKRKWKLSTAVMTAGMVLSLAACGGGSLTDEGSSEGNADGGDKKDVTLNVFQFKAEIAKDLEAMAKEYEEETGVKVTVQT
VGGGADYGAALKSQFASGNEPDIFNNGGFTEAQTWKDKLEDLSSEKWVGDLTEVAKEPMTMDGKLYGMPMNLEGYGFIYN
KELFEKAGIKELPKTLSELTDAAEKLEQAGITPFSVGYAEFWILGIHLLNIPMAQQDDPDAFIQALNENKAKFEDNEQFQ
EFLKLFDLTIKYGNKNPLTTDYNTQVTQFAQGETAMLQQGNWAQQMILDVNPDMEMGFVPIPINDDAEKMDRLPVGVPNN
WVVNKNSKYKEEAKDFLEWMATSDTGKDYMVNKFKFIPAFKSIEANDLGPLADDILAYSNEGKTISWNWFKYPDGAVNEY
GALMQAYVGGQKTGEEMLQDFTKVWQDKVK

Specific function: Probably part of the binding-protein-dependent transport system yurMNO [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: 660 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 720 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase,

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 47885; Mature: 47885

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01037 SBP_BACTERIAL_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKWKLSTAVMTAGMVLSLAACGGGSLTDEGSSEGNADGGDKKDVTLNVFQFKAEIAKD
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHH
LEAMAKEYEEETGVKVTVQTVGGGADYGAALKSQFASGNEPDIFNNGGFTEAQTWKDKLE
HHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH
DLSSEKWVGDLTEVAKEPMTMDGKLYGMPMNLEGYGFIYNKELFEKAGIKELPKTLSELT
HCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCEEEECHHHHHHCCHHHHHHHHHHHH
DAAEKLEQAGITPFSVGYAEFWILGIHLLNIPMAQQDDPDAFIQALNENKAKFEDNEQFQ
HHHHHHHHCCCCCEECHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHH
EFLKLFDLTIKYGNKNPLTTDYNTQVTQFAQGETAMLQQGNWAQQMILDVNPDMEMGFVP
HHHHHHHHHEEECCCCCCCCCCCCHHHHHHCCCHHHHCCCCHHHHEEEECCCCCCCCEEE
IPINDDAEKMDRLPVGVPNNWVVNKNSKYKEEAKDFLEWMATSDTGKDYMVNKFKFIPAF
ECCCCCHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHEEECCHH
KSIEANDLGPLADDILAYSNEGKTISWNWFKYPDGAVNEYGALMQAYVGGQKTGEEMLQD
HCCCCCCCCCHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHH
FTKVWQDKVK
HHHHHHHHCC
>Mature Secondary Structure
MKRKWKLSTAVMTAGMVLSLAACGGGSLTDEGSSEGNADGGDKKDVTLNVFQFKAEIAKD
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHH
LEAMAKEYEEETGVKVTVQTVGGGADYGAALKSQFASGNEPDIFNNGGFTEAQTWKDKLE
HHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH
DLSSEKWVGDLTEVAKEPMTMDGKLYGMPMNLEGYGFIYNKELFEKAGIKELPKTLSELT
HCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCEEEECHHHHHHCCHHHHHHHHHHHH
DAAEKLEQAGITPFSVGYAEFWILGIHLLNIPMAQQDDPDAFIQALNENKAKFEDNEQFQ
HHHHHHHHCCCCCEECHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHH
EFLKLFDLTIKYGNKNPLTTDYNTQVTQFAQGETAMLQQGNWAQQMILDVNPDMEMGFVP
HHHHHHHHHEEECCCCCCCCCCCCHHHHHHCCCHHHHCCCCHHHHEEEECCCCCCCCEEE
IPINDDAEKMDRLPVGVPNNWVVNKNSKYKEEAKDFLEWMATSDTGKDYMVNKFKFIPAF
ECCCCCHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHEEECCHH
KSIEANDLGPLADDILAYSNEGKTISWNWFKYPDGAVNEYGALMQAYVGGQKTGEEMLQD
HCCCCCCCCCHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHH
FTKVWQDKVK
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; maltose [Periplasm]; H2O [C]

Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]