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The map label for this gene is lytR [H]

Identifier: 229918031

GI number: 229918031

Start: 2262981

End: 2264180

Strand: Direct

Name: lytR [H]

Synonym: EAT1b_2310

Alternate gene names: 229918031

Gene position: 2262981-2264180 (Clockwise)

Preceding gene: 229918029

Following gene: 229918032

Centisome position: 75.44

GC content: 47.42

Gene sequence:

>1200_bases
ATGATGAAAGATGAACAACATTTATCGCGTGTTGAACGTAGAAAGCGCGAATTAGAACAACAAGAAATCGAATCGTCTCG
TGTGGACCATGGTCAAGCGGACGAGCCCTCTATACATCCACAATCTGAACAACAGCGTGAACGGGTAACACGCCAATCAG
AACATCCCTTTTTAAATGAACAAACGAAAGAATCTCCAAGGACGAAAAATGGGACGGCAAAGTCGAGTCGGAAACGACTA
CCCCGGGTTTCATTATTTTCGAAACGGAAATCATCTCGTCCAACATCCCGACAGACGACGAGACAATCGAAACCATCTAC
TCCCGCTAAACGAGAAACGGATCATGCGTCTAAACAACCAACGAAACGAAAGCGTAAATGGAAAGGGAAAGCTGTCCTTT
TTCTACTTGCAATGCTACTGATTGTTGGATATTTTGCGACTGCTCCATTCACATTCCTCATTATGGGGAGCGATGCGCGG
GTAGGGGAATCGTTGTCAGGATCTCGTACAGACTCCCTGCAGTTGATGGAGTTCGTACCACGTTCTGGGACTGTTCAGAA
CGTATCGATTCCACGTGATACGTATACAGCGATTCCATGTGAACCTGAACGAGAAGGTGACAAAATCACGCATGCGTTCG
CGTTCGGCGGCGCAGAGTGTACGATTGGTGCCGTGGAAGGGCTAACCGATGCCTCGGTCGATGGACAAGTCGTCATCACG
TTCGAATCGTTCATGGAATTGATTGATTTGATCGGTGGGGTGAATGTCACGGCGACGCATTCGTTTAGCGAGAAAGGGTT
CAACCAGACGTATGAGTATACAGAAGGTGTTTCCTATGCAATGGATGGAGACATGGCATTGGCGTATGCGAGACACCGTA
AATCGGATACAGACGGAGCGCGTTCGAATCGTCAAACGGAGGTCATGACAGCTGTCGCTGAAAAGCTGGCAAGCCCTTCA
GGTTGGACAAAAATTCCGGCGACGTACCGCTTCATGAAAGAAGAAATGGGACTTGAGATGAACGTCTTGCAAATGGCATC
TGTCGGATTGACGATGATTTCGAATCCTGAGGTGAATAAGATGCAAGTTGAGGGTCAAGATGCTTATATCAATAACGTGT
ATTACTATGAACCGTTAGAAGAGAGCGTGCAGGCGATTCGAGACGCCCTTGATTTATCTGTCTGGGGTACTGTCAGATAA

Upstream 100 bases:

>100_bases
TCATTTGCTCTCATGCTTAAGACGGATTTTCGTAAGAAACGTTGTCAGATGATGGCTAGTTCGGGATAATAGAGAAAAAT
TGATAAAGTTGAGGATCATA

Downstream 100 bases:

>100_bases
TTTTAAGAAAAGGGTTTGATTCTGACTTGAAAGAGGAATTTTAATCAAATGAACTACTCTTTTGAGGAGGGAAATTTGAA
TGAAAGTTTTAGTCATTGGA

Product: cell envelope-related transcriptional attenuator

Products: NA

Alternate protein names: Membrane-bound protein lytR [H]

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MMKDEQHLSRVERRKRELEQQEIESSRVDHGQADEPSIHPQSEQQRERVTRQSEHPFLNEQTKESPRTKNGTAKSSRKRL
PRVSLFSKRKSSRPTSRQTTRQSKPSTPAKRETDHASKQPTKRKRKWKGKAVLFLLAMLLIVGYFATAPFTFLIMGSDAR
VGESLSGSRTDSLQLMEFVPRSGTVQNVSIPRDTYTAIPCEPEREGDKITHAFAFGGAECTIGAVEGLTDASVDGQVVIT
FESFMELIDLIGGVNVTATHSFSEKGFNQTYEYTEGVSYAMDGDMALAYARHRKSDTDGARSNRQTEVMTAVAEKLASPS
GWTKIPATYRFMKEEMGLEMNVLQMASVGLTMISNPEVNKMQVEGQDAYINNVYYYEPLEESVQAIRDALDLSVWGTVR

Sequences:

>Translated_399_residues
MMKDEQHLSRVERRKRELEQQEIESSRVDHGQADEPSIHPQSEQQRERVTRQSEHPFLNEQTKESPRTKNGTAKSSRKRL
PRVSLFSKRKSSRPTSRQTTRQSKPSTPAKRETDHASKQPTKRKRKWKGKAVLFLLAMLLIVGYFATAPFTFLIMGSDAR
VGESLSGSRTDSLQLMEFVPRSGTVQNVSIPRDTYTAIPCEPEREGDKITHAFAFGGAECTIGAVEGLTDASVDGQVVIT
FESFMELIDLIGGVNVTATHSFSEKGFNQTYEYTEGVSYAMDGDMALAYARHRKSDTDGARSNRQTEVMTAVAEKLASPS
GWTKIPATYRFMKEEMGLEMNVLQMASVGLTMISNPEVNKMQVEGQDAYINNVYYYEPLEESVQAIRDALDLSVWGTVR
>Mature_399_residues
MMKDEQHLSRVERRKRELEQQEIESSRVDHGQADEPSIHPQSEQQRERVTRQSEHPFLNEQTKESPRTKNGTAKSSRKRL
PRVSLFSKRKSSRPTSRQTTRQSKPSTPAKRETDHASKQPTKRKRKWKGKAVLFLLAMLLIVGYFATAPFTFLIMGSDAR
VGESLSGSRTDSLQLMEFVPRSGTVQNVSIPRDTYTAIPCEPEREGDKITHAFAFGGAECTIGAVEGLTDASVDGQVVIT
FESFMELIDLIGGVNVTATHSFSEKGFNQTYEYTEGVSYAMDGDMALAYARHRKSDTDGARSNRQTEVMTAVAEKLASPS
GWTKIPATYRFMKEEMGLEMNVLQMASVGLTMISNPEVNKMQVEGQDAYINNVYYYEPLEESVQAIRDALDLSVWGTVR

Specific function: Attenuator role for operon expression [H]

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004474 [H]

Pfam domain/function: PF03816 LytR_cpsA_psr [H]

EC number: NA

Molecular weight: Translated: 44825; Mature: 44825

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKDEQHLSRVERRKRELEQQEIESSRVDHGQADEPSIHPQSEQQRERVTRQSEHPFLNE
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
QTKESPRTKNGTAKSSRKRLPRVSLFSKRKSSRPTSRQTTRQSKPSTPAKRETDHASKQP
HHHCCCCCCCCCCHHHHHCCCHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCC
TKRKRKWKGKAVLFLLAMLLIVGYFATAPFTFLIMGSDARVGESLSGSRTDSLQLMEFVP
HHHHHHHCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHCC
RSGTVQNVSIPRDTYTAIPCEPEREGDKITHAFAFGGAECTIGAVEGLTDASVDGQVVIT
CCCCEEEECCCCCCCEECCCCCCCCCCCEEEEEEECCCCEEEHHHCCCCCCCCCCEEEEE
FESFMELIDLIGGVNVTATHSFSEKGFNQTYEYTEGVSYAMDGDMALAYARHRKSDTDGA
HHHHHHHHHHHCCCCEEEECCHHHCCCCCCHHHHCCCCEEECCCHHHHHHHHCCCCCCCC
RSNRQTEVMTAVAEKLASPSGWTKIPATYRFMKEEMGLEMNVLQMASVGLTMISNPEVNK
CCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCEEEECCCCCCE
MQVEGQDAYINNVYYYEPLEESVQAIRDALDLSVWGTVR
EEECCCCEEECCEEEECCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MMKDEQHLSRVERRKRELEQQEIESSRVDHGQADEPSIHPQSEQQRERVTRQSEHPFLNE
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
QTKESPRTKNGTAKSSRKRLPRVSLFSKRKSSRPTSRQTTRQSKPSTPAKRETDHASKQP
HHHCCCCCCCCCCHHHHHCCCHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCC
TKRKRKWKGKAVLFLLAMLLIVGYFATAPFTFLIMGSDARVGESLSGSRTDSLQLMEFVP
HHHHHHHCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHCC
RSGTVQNVSIPRDTYTAIPCEPEREGDKITHAFAFGGAECTIGAVEGLTDASVDGQVVIT
CCCCEEEECCCCCCCEECCCCCCCCCCCEEEEEEECCCCEEEHHHCCCCCCCCCCEEEEE
FESFMELIDLIGGVNVTATHSFSEKGFNQTYEYTEGVSYAMDGDMALAYARHRKSDTDGA
HHHHHHHHHHHCCCCEEEECCHHHCCCCCCHHHHCCCCEEECCCHHHHHHHHCCCCCCCC
RSNRQTEVMTAVAEKLASPSGWTKIPATYRFMKEEMGLEMNVLQMASVGLTMISNPEVNK
CCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCEEEECCCCCCE
MQVEGQDAYINNVYYYEPLEESVQAIRDALDLSVWGTVR
EEECCCCEEECCEEEECCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA