| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229918023
Identifier: 229918023
GI number: 229918023
Start: 2256744
End: 2257553
Strand: Direct
Name: 229918023
Synonym: EAT1b_2302
Alternate gene names: NA
Gene position: 2256744-2257553 (Clockwise)
Preceding gene: 229918022
Following gene: 229918025
Centisome position: 75.23
GC content: 47.16
Gene sequence:
>810_bases ATGGAGTGGAAGAATATCTGGCGTGGGATGGCCATGGGAACGAGTGATTTAATTCCTGGTGTAAGCGGCGGTACCATCGC AGTCATTTTAGGCATCTACGATCAACTCATCGAAGCGATTAGCGGCGTTTTTAGCCGATATTGGAAGAAATATATTGGGT TCTTGATTCCATTGGCAATTGGAATGGGGACAGCCATTATCGCGCTCAGTCGCGTCATTGAATACTTGTTACTTGAGTAC TACGCACCGACACAGTTTTTCTTTATCGGATTGATTTTAGGGATTATTCCACTTCTATTCGTGGAATTTAAATCACGCGC ATCGATTCGTCCGGTCCATGTCATTGCCATGGTTGTCGCAACCATCCTTGTCGCGAGTATGGCATTTCTGAATCCGGTTG ATTCGTCGATTATGACAGACGTGACGTTTGGAACGGCGCTTCTCTTATTCTTCTCCGGCTGGTTAGGCAGCATGGCGATG TTGCTTCCTGGAATTAGCGGGTCATTCGTCTTGTTGTTAATTGGTGTTTATCCAACCGTCATCAGCGCCATCTCAAACTT CAATCTGTTGATTATTGGGATTGTCGGTGCTGGAGTGGCCGTCGGCTTTATTGTAAGTAGTAAAGTCATTCGTTACTTGT TGGCGAATTTCCCGGGGATGACGTTCTCCGTCATTATCGGATTGGTCATCGGCTCACTCGCCGTCGTGTTTCCGGGTGTG CCAGCTTCTGGAGTCATGTGGATACTCAGTATCGTCGCATTCATTGCGGGGGTCATCGTCGTCCGACTACTCAGCAAATA TTCTGTCTAA
Upstream 100 bases:
>100_bases ATCAATTCAACTCCTTTCTCGGTCTAAAAGCGGATGCGCAAACTTCTTTTCTCGACTATACTAAGGGCTTGAGGAAAGAT ATACGTAAAGGAGATACATT
Downstream 100 bases:
>100_bases ATGACGAAGGAGTCCAGCGATGAGCCGGACTCCTTTTTAATAGATGAAGGGGAAAAGACGCTTGCGCGTCTTCGACCAGG TTTGGTAAGACTGACCGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MEWKNIWRGMAMGTSDLIPGVSGGTIAVILGIYDQLIEAISGVFSRYWKKYIGFLIPLAIGMGTAIIALSRVIEYLLLEY YAPTQFFFIGLILGIIPLLFVEFKSRASIRPVHVIAMVVATILVASMAFLNPVDSSIMTDVTFGTALLLFFSGWLGSMAM LLPGISGSFVLLLIGVYPTVISAISNFNLLIIGIVGAGVAVGFIVSSKVIRYLLANFPGMTFSVIIGLVIGSLAVVFPGV PASGVMWILSIVAFIAGVIVVRLLSKYSV
Sequences:
>Translated_269_residues MEWKNIWRGMAMGTSDLIPGVSGGTIAVILGIYDQLIEAISGVFSRYWKKYIGFLIPLAIGMGTAIIALSRVIEYLLLEY YAPTQFFFIGLILGIIPLLFVEFKSRASIRPVHVIAMVVATILVASMAFLNPVDSSIMTDVTFGTALLLFFSGWLGSMAM LLPGISGSFVLLLIGVYPTVISAISNFNLLIIGIVGAGVAVGFIVSSKVIRYLLANFPGMTFSVIIGLVIGSLAVVFPGV PASGVMWILSIVAFIAGVIVVRLLSKYSV >Mature_269_residues MEWKNIWRGMAMGTSDLIPGVSGGTIAVILGIYDQLIEAISGVFSRYWKKYIGFLIPLAIGMGTAIIALSRVIEYLLLEY YAPTQFFFIGLILGIIPLLFVEFKSRASIRPVHVIAMVVATILVASMAFLNPVDSSIMTDVTFGTALLLFFSGWLGSMAM LLPGISGSFVLLLIGVYPTVISAISNFNLLIIGIVGAGVAVGFIVSSKVIRYLLANFPGMTFSVIIGLVIGSLAVVFPGV PASGVMWILSIVAFIAGVIVVRLLSKYSV
Specific function: Unknown
COG id: COG2035
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28767; Mature: 28767
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEWKNIWRGMAMGTSDLIPGVSGGTIAVILGIYDQLIEAISGVFSRYWKKYIGFLIPLAI CCHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GMGTAIIALSRVIEYLLLEYYAPTQFFFIGLILGIIPLLFVEFKSRASIRPVHVIAMVVA HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH TILVASMAFLNPVDSSIMTDVTFGTALLLFFSGWLGSMAMLLPGISGSFVLLLIGVYPTV HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH ISAISNFNLLIIGIVGAGVAVGFIVSSKVIRYLLANFPGMTFSVIIGLVIGSLAVVFPGV HHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC PASGVMWILSIVAFIAGVIVVRLLSKYSV CHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEWKNIWRGMAMGTSDLIPGVSGGTIAVILGIYDQLIEAISGVFSRYWKKYIGFLIPLAI CCHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GMGTAIIALSRVIEYLLLEYYAPTQFFFIGLILGIIPLLFVEFKSRASIRPVHVIAMVVA HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH TILVASMAFLNPVDSSIMTDVTFGTALLLFFSGWLGSMAMLLPGISGSFVLLLIGVYPTV HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH ISAISNFNLLIIGIVGAGVAVGFIVSSKVIRYLLANFPGMTFSVIIGLVIGSLAVVFPGV HHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC PASGVMWILSIVAFIAGVIVVRLLSKYSV CHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA