Click here to switch to the map view.

The map label for this gene is cypC [H]

Identifier: 229918020

GI number: 229918020

Start: 2253966

End: 2255207

Strand: Direct

Name: cypC [H]

Synonym: EAT1b_2299

Alternate gene names: 229918020

Gene position: 2253966-2255207 (Clockwise)

Preceding gene: 229918018

Following gene: 229918022

Centisome position: 75.13

GC content: 46.46

Gene sequence:

>1242_bases
ATGGGGAAAGTCATACCGAAACAAGAAGGTCTCGACCATAGTGTCGATTTTTTACGGGAAGGATATTTGTTTGTCGCGAA
TCGACGCAAAAGTTTTCAGTCGAATATCTTTGAGTCGCGCCTGCTCGGGGAGCGCGTGATTTGTCTTGGAGGCGAAGAGG
CGGCAGAAGTATTCTATGATGCAAATAAATTCACGCGTCAGGATGCTGCGCCGAAACGTCTCCTCAAGACACTATTCGGA
GAAGGGGGAGTCCAAACCTTAGACGGTTCGGAACATACGCATCGAAAACAGATGTTCATGTCATTGATGACAAAAGAAAA
TATAGATCGATTGCTCCGATTGACATATCGTGAGTGGAACCAGATTGAACGAATGGGAGAGGAGATTGTCTTATACGATA
TTGCACAAGAAGTGTTGATGAAGGCCGTATGTGAATGGTCGGGAGTTCCACTTGCGAAAGAAGAAGTGGGGAAGCGTACC
GAAGAGATGAGGTTATTATTTGAATCGGGTACGTCTCTTGGTCCCACGTATTTACAAGGTCGGAAGGCACGAAGTTCCGC
TGAAGTCTGGATTCGTCAGATGGTAAAAGAAGTGCGGTCGAATCGATTATTGCCGAACGAACATACGGCGCTTTACGAGT
TTTCGTGGCACCGGGATGAATCTGGAGAATTATTACCTGAAGAGGTGGTGGCGGTAGAAGTATTGAACATTTTGCGCCCG
ACTGTCGCAATCTCGGTATATGTCCTCTTTACCGTCTTGGCTTTGCATCAGTTCCCGGATGTAAAAGAGCAGGTAGAGCG
GGGAGAGGTCTCGAAAACAGAATTCGTTCAGGAAGTGAGACGGTTTTATCCATTTTTCCCTGTAGCCGCAGCTCGTGTCA
AAACCGATTTTGAATGGGACGGCTATGCATTTCCGGAAGGAACGCTGACGCTTCTTGATTTGTATGGTACGAATCATGAT
GTCTCTATTTGGACGGAACCAGATCGATTCGATCCCTCTCGTTTCAAAGATTGGAAGGAGAGTCCGTTTAATTTTATTCC
GCAAGGTGGGGGAGATGTGGATTTTGGACACCGATGTGCCGGTGAACATGTGACGATTGCAATTCTCGCACAAGTCATCG
AGTTGTTTACTAAGGAATACGCCTACACGGTCCCGCCTCAAGACTTGAGCTATAGTTTTGTAGACATGCCGAGTCTGCCG
AAAAGTAAATTGCGATTGACTCATCTAACTCGAAACCAATAA

Upstream 100 bases:

>100_bases
AGAACGGCAACATGTCACTCGCTCCTTTCGATATTAGGTTTGTTCGCTAACGACAGGGGAACATCCTCTATAGTTCGAAA
AAAGAGAAAGGGTGAGTTGG

Downstream 100 bases:

>100_bases
AAAATCGCCTACTCGATGGGAGTAGGCGATTTTGAATTTACTTTGTTTGCAAATTCAGTCGTTTGGAGATGGGACGAATG
GAGACCGATGAATCGATCAT

Product: cytochrome P450

Products: NA

Alternate protein names: Cytochrome P450BsBeta; Fatty acid beta-hydroxylase [H]

Number of amino acids: Translated: 413; Mature: 412

Protein sequence:

>413_residues
MGKVIPKQEGLDHSVDFLREGYLFVANRRKSFQSNIFESRLLGERVICLGGEEAAEVFYDANKFTRQDAAPKRLLKTLFG
EGGVQTLDGSEHTHRKQMFMSLMTKENIDRLLRLTYREWNQIERMGEEIVLYDIAQEVLMKAVCEWSGVPLAKEEVGKRT
EEMRLLFESGTSLGPTYLQGRKARSSAEVWIRQMVKEVRSNRLLPNEHTALYEFSWHRDESGELLPEEVVAVEVLNILRP
TVAISVYVLFTVLALHQFPDVKEQVERGEVSKTEFVQEVRRFYPFFPVAAARVKTDFEWDGYAFPEGTLTLLDLYGTNHD
VSIWTEPDRFDPSRFKDWKESPFNFIPQGGGDVDFGHRCAGEHVTIAILAQVIELFTKEYAYTVPPQDLSYSFVDMPSLP
KSKLRLTHLTRNQ

Sequences:

>Translated_413_residues
MGKVIPKQEGLDHSVDFLREGYLFVANRRKSFQSNIFESRLLGERVICLGGEEAAEVFYDANKFTRQDAAPKRLLKTLFG
EGGVQTLDGSEHTHRKQMFMSLMTKENIDRLLRLTYREWNQIERMGEEIVLYDIAQEVLMKAVCEWSGVPLAKEEVGKRT
EEMRLLFESGTSLGPTYLQGRKARSSAEVWIRQMVKEVRSNRLLPNEHTALYEFSWHRDESGELLPEEVVAVEVLNILRP
TVAISVYVLFTVLALHQFPDVKEQVERGEVSKTEFVQEVRRFYPFFPVAAARVKTDFEWDGYAFPEGTLTLLDLYGTNHD
VSIWTEPDRFDPSRFKDWKESPFNFIPQGGGDVDFGHRCAGEHVTIAILAQVIELFTKEYAYTVPPQDLSYSFVDMPSLP
KSKLRLTHLTRNQ
>Mature_412_residues
GKVIPKQEGLDHSVDFLREGYLFVANRRKSFQSNIFESRLLGERVICLGGEEAAEVFYDANKFTRQDAAPKRLLKTLFGE
GGVQTLDGSEHTHRKQMFMSLMTKENIDRLLRLTYREWNQIERMGEEIVLYDIAQEVLMKAVCEWSGVPLAKEEVGKRTE
EMRLLFESGTSLGPTYLQGRKARSSAEVWIRQMVKEVRSNRLLPNEHTALYEFSWHRDESGELLPEEVVAVEVLNILRPT
VAISVYVLFTVLALHQFPDVKEQVERGEVSKTEFVQEVRRFYPFFPVAAARVKTDFEWDGYAFPEGTLTLLDLYGTNHDV
SIWTEPDRFDPSRFKDWKESPFNFIPQGGGDVDFGHRCAGEHVTIAILAQVIELFTKEYAYTVPPQDLSYSFVDMPSLPK
SKLRLTHLTRNQ

Specific function: Catalyzes the alpha- and beta-hydroxylation of myristic acid in the presence of hydrogen peroxide [H]

COG id: COG2124

COG function: function code Q; Cytochrome P450

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome P450 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001128
- InterPro:   IPR002401 [H]

Pfam domain/function: PF00067 p450 [H]

EC number: NA

Molecular weight: Translated: 47603; Mature: 47472

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKVIPKQEGLDHSVDFLREGYLFVANRRKSFQSNIFESRLLGERVICLGGEEAAEVFYD
CCCCCCCCCCCCHHHHHHHCCCEEEECCHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHC
ANKFTRQDAAPKRLLKTLFGEGGVQTLDGSEHTHRKQMFMSLMTKENIDRLLRLTYREWN
CHHHHHHCCHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QIERMGEEIVLYDIAQEVLMKAVCEWSGVPLAKEEVGKRTEEMRLLFESGTSLGPTYLQG
HHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCC
RKARSSAEVWIRQMVKEVRSNRLLPNEHTALYEFSWHRDESGELLPEEVVAVEVLNILRP
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
TVAISVYVLFTVLALHQFPDVKEQVERGEVSKTEFVQEVRRFYPFFPVAAARVKTDFEWD
HHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCC
GYAFPEGTLTLLDLYGTNHDVSIWTEPDRFDPSRFKDWKESPFNFIPQGGGDVDFGHRCA
CEECCCCCEEEEEEECCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
GEHVTIAILAQVIELFTKEYAYTVPPQDLSYSFVDMPSLPKSKLRLTHLTRNQ
CCHHHHHHHHHHHHHHHHHCEEECCCCCCCCCEECCCCCCHHHHEEHHCCCCC
>Mature Secondary Structure 
GKVIPKQEGLDHSVDFLREGYLFVANRRKSFQSNIFESRLLGERVICLGGEEAAEVFYD
CCCCCCCCCCCHHHHHHHCCCEEEECCHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHC
ANKFTRQDAAPKRLLKTLFGEGGVQTLDGSEHTHRKQMFMSLMTKENIDRLLRLTYREWN
CHHHHHHCCHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QIERMGEEIVLYDIAQEVLMKAVCEWSGVPLAKEEVGKRTEEMRLLFESGTSLGPTYLQG
HHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCC
RKARSSAEVWIRQMVKEVRSNRLLPNEHTALYEFSWHRDESGELLPEEVVAVEVLNILRP
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
TVAISVYVLFTVLALHQFPDVKEQVERGEVSKTEFVQEVRRFYPFFPVAAARVKTDFEWD
HHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCC
GYAFPEGTLTLLDLYGTNHDVSIWTEPDRFDPSRFKDWKESPFNFIPQGGGDVDFGHRCA
CEECCCCCEEEEEEECCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
GEHVTIAILAQVIELFTKEYAYTVPPQDLSYSFVDMPSLPKSKLRLTHLTRNQ
CCHHHHHHHHHHHHHHHHHCEEECCCCCCCCCEECCCCCCHHHHEEHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10529095; 9384377; 12519760 [H]