| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is macB [H]
Identifier: 229917889
GI number: 229917889
Start: 2104079
End: 2105233
Strand: Direct
Name: macB [H]
Synonym: EAT1b_2167
Alternate gene names: 229917889
Gene position: 2104079-2105233 (Clockwise)
Preceding gene: 229917888
Following gene: 229917890
Centisome position: 70.14
GC content: 52.03
Gene sequence:
>1155_bases ATGATTCGAGAAAATATACGCATGGCTTGGTTGACGGTCATCAGTCACAAGATGCGCTCCTTCTTGACGATTTTAGGGAT TGTCATCGGGACGGCTTCGATTATTGCCTTGATGACGATCATTTCCGGTGTGACCGATTCCATTAACGATGAAGTCGCGA CGTTTGGAGCTGATCGTATGACCGTTCAAATCGGAGAAGATGGGAAATCCGGTGTCAGTATGGCGGACATGGATCGGCTC GAAGCCATTGAAGGGATCGCCTCACTCTCTCCGACGCTGAGTCAAATGACCGATGTATATGTAGCGGGGCAGACGGAACA ACAAACCATTCTTGGGAAAAGTGAAGCGTTCTTCAAAGACGATTCGGTTGTCGCAACCGGGCGCGGATTGACACCACTCG ACGTCAATCAACAGACGCGTGTCGCCTTGCTCGGAGAAACGATTGCGAAAGAGGCGTTTCCGACATCCTCTCCTCTCGGG GAAGAGATTTCCGTTGGTGGGATTCGTTACACCGTCGTTGGAACGCTTGCGCCATCATCGGAATTTTCCATGTCGACAGA CGAGGCCATCGTCATCCCTGTGACGACTGCACTGACGCAGTTTCATCAAGGGACGATTGCCACGTTTGATTTATATACCG AACCGGGTGCTTCAGCTGTCGTACAGGATGAAGTGACACAACAGCTGACGACCGCGTTCAATGGACGTGACGCCTTTACA GTGACGAGCTTTGAGGACGCACTCGCTTCCATCGATCAAATCAATGCGCTGCTCAGCATGCTCCTCGTCGGCATCGCTTC GATTTCTTTACTCGTCGGAGGCATCGGCATCATGAACATGATGCTCGTTTCGGTGACCGAACGAACAAGCGAGATCGGAC TGCGTAAAGCACTCGGTGCGACACCTGGTAAGATTCGACAACAGTTCTTGTTTGAGTCCGTCCTGCTTTCGATGCTCGGA GGGCTCGTCGGTGTCTTGATTGGCGGACTGCTTGCCTTCGGACTGACGCTCGTCATGGGCGTACCGTTCACATTGGCAAG TTCAACTGTCGGATTGGCACTCGGTTTCTCTGTCGTAATCGGGGTCGTGTTCGGCTATATTCCAGCTCGGAAAGCCTCGA ACTTGCAACCGATTGAAGCGTTGCGAAACGTATAA
Upstream 100 bases:
>100_bases AGACAATTATCATGATCACCCATGATATCGATATCGCCAAAGAAGCGACTCGTATCGTACATGTGCGTGACGGGAAGATT GAAAAGGAGGAACGGGTGCG
Downstream 100 bases:
>100_bases GCCATTAGAAAGAAGGGAAACAACATGGTCACCATTTTACTCGCAGAAGATGATGAGACGCTCGGCGGTTTATTAGTCGA TTATTTGACGGTGGCCGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MIRENIRMAWLTVISHKMRSFLTILGIVIGTASIIALMTIISGVTDSINDEVATFGADRMTVQIGEDGKSGVSMADMDRL EAIEGIASLSPTLSQMTDVYVAGQTEQQTILGKSEAFFKDDSVVATGRGLTPLDVNQQTRVALLGETIAKEAFPTSSPLG EEISVGGIRYTVVGTLAPSSEFSMSTDEAIVIPVTTALTQFHQGTIATFDLYTEPGASAVVQDEVTQQLTTAFNGRDAFT VTSFEDALASIDQINALLSMLLVGIASISLLVGGIGIMNMMLVSVTERTSEIGLRKALGATPGKIRQQFLFESVLLSMLG GLVGVLIGGLLAFGLTLVMGVPFTLASSTVGLALGFSVVIGVVFGYIPARKASNLQPIEALRNV
Sequences:
>Translated_384_residues MIRENIRMAWLTVISHKMRSFLTILGIVIGTASIIALMTIISGVTDSINDEVATFGADRMTVQIGEDGKSGVSMADMDRL EAIEGIASLSPTLSQMTDVYVAGQTEQQTILGKSEAFFKDDSVVATGRGLTPLDVNQQTRVALLGETIAKEAFPTSSPLG EEISVGGIRYTVVGTLAPSSEFSMSTDEAIVIPVTTALTQFHQGTIATFDLYTEPGASAVVQDEVTQQLTTAFNGRDAFT VTSFEDALASIDQINALLSMLLVGIASISLLVGGIGIMNMMLVSVTERTSEIGLRKALGATPGKIRQQFLFESVLLSMLG GLVGVLIGGLLAFGLTLVMGVPFTLASSTVGLALGFSVVIGVVFGYIPARKASNLQPIEALRNV >Mature_384_residues MIRENIRMAWLTVISHKMRSFLTILGIVIGTASIIALMTIISGVTDSINDEVATFGADRMTVQIGEDGKSGVSMADMDRL EAIEGIASLSPTLSQMTDVYVAGQTEQQTILGKSEAFFKDDSVVATGRGLTPLDVNQQTRVALLGETIAKEAFPTSSPLG EEISVGGIRYTVVGTLAPSSEFSMSTDEAIVIPVTTALTQFHQGTIATFDLYTEPGASAVVQDEVTQQLTTAFNGRDAFT VTSFEDALASIDQINALLSMLLVGIASISLLVGGIGIMNMMLVSVTERTSEIGLRKALGATPGKIRQQFLFESVLLSMLG GLVGVLIGGLLAFGLTLVMGVPFTLASSTVGLALGFSVVIGVVFGYIPARKASNLQPIEALRNV
Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI1787105, Length=393, Percent_Identity=30.2798982188295, Blast_Score=151, Evalue=7e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017911 - InterPro: IPR003593 - InterPro: IPR003838 [H]
Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 40422; Mature: 40422
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRENIRMAWLTVISHKMRSFLTILGIVIGTASIIALMTIISGVTDSINDEVATFGADRM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEE TVQIGEDGKSGVSMADMDRLEAIEGIASLSPTLSQMTDVYVAGQTEQQTILGKSEAFFKD EEEECCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHEEEECCCHHHHHHCCCHHHCCC DSVVATGRGLTPLDVNQQTRVALLGETIAKEAFPTSSPLGEEISVGGIRYTVVGTLAPSS CCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCC EFSMSTDEAIVIPVTTALTQFHQGTIATFDLYTEPGASAVVQDEVTQQLTTAFNGRDAFT CCCCCCCCEEEEEHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEE VTSFEDALASIDQINALLSMLLVGIASISLLVGGIGIMNMMLVSVTERTSEIGLRKALGA ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TPGKIRQQFLFESVLLSMLGGLVGVLIGGLLAFGLTLVMGVPFTLASSTVGLALGFSVVI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH GVVFGYIPARKASNLQPIEALRNV HHHHHHCCCCCCCCCCHHHHHHCC >Mature Secondary Structure MIRENIRMAWLTVISHKMRSFLTILGIVIGTASIIALMTIISGVTDSINDEVATFGADRM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEE TVQIGEDGKSGVSMADMDRLEAIEGIASLSPTLSQMTDVYVAGQTEQQTILGKSEAFFKD EEEECCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHEEEECCCHHHHHHCCCHHHCCC DSVVATGRGLTPLDVNQQTRVALLGETIAKEAFPTSSPLGEEISVGGIRYTVVGTLAPSS CCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCC EFSMSTDEAIVIPVTTALTQFHQGTIATFDLYTEPGASAVVQDEVTQQLTTAFNGRDAFT CCCCCCCCEEEEEHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEE VTSFEDALASIDQINALLSMLLVGIASISLLVGGIGIMNMMLVSVTERTSEIGLRKALGA ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TPGKIRQQFLFESVLLSMLGGLVGVLIGGLLAFGLTLVMGVPFTLASSTVGLALGFSVVI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH GVVFGYIPARKASNLQPIEALRNV HHHHHHCCCCCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA