| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229917862
Identifier: 229917862
GI number: 229917862
Start: 2086901
End: 2087545
Strand: Direct
Name: 229917862
Synonym: EAT1b_2140
Alternate gene names: NA
Gene position: 2086901-2087545 (Clockwise)
Preceding gene: 229917861
Following gene: 229917864
Centisome position: 69.57
GC content: 43.57
Gene sequence:
>645_bases TTGGGAATTTATTATACATACCAGCATGAAGCTGCGTGGCATCAGGCTTTGGAAAAGGGATATCTTGAGGCAAGTGGAGA ACACGCACTATTCATGGATCCTGATTTTGAGGATTTTAAAATGTCTTACGATTGGATGGTTGAACAATACGAGAAGCGTA CCGGCATCTCATTGAATGGGAACTATCCAATCTGGTGTTGGGACGAGTTTCCCGATTTAGGCCGGGATGGACATATTGAT CAAGGTGCGAAAGGAATTGTCTTAACGGTTGAGATTCCAGATGAAGCAATCTTAGCATCAGAATTTCAATATTGGCATAT CGTCTTAGGTAACGGATATATTTTTGAAAACTATGACGATGAATATGATGACTTTGAGGATTCATATTTTTCGACTGAAG TTGTTCGGAAGTCATGGGAGCGCATCTTTGACCGTACGTGGTGTGAGGCATCGATCGCGAACCAACCGAATGTCGGTTTG ACATATCAGTATGTCACCCATCGTATCGATCTCATGCAAGTTCGAGCTGTCATGCCATTCGTCGGTCGCGGTGACAAATG GTTTGACCGAGTGAGAGGGATTGGATGGAGAATCGGACATAAGCTCGGACTCATTCGATCTAAACCGTTTAAATGGAAAG CGTGA
Upstream 100 bases:
>100_bases GACCCATCATATAATATGACCAGGTAATTTTTTTATCGTAGTTCTTTTGCTGAAATCTTTTAAACTAGCCGAAGAGGAAC GATGAAAGGATTGAAAGGTA
Downstream 100 bases:
>100_bases TCAGACGAAACGCAGCTAACCTGAGTCAGCTGCGTTTTGTGTTCGAATCTAATTGTTGTTCGATGTGGTCGAGACGTTCG ATTAATACTTGTATCTGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MGIYYTYQHEAAWHQALEKGYLEASGEHALFMDPDFEDFKMSYDWMVEQYEKRTGISLNGNYPIWCWDEFPDLGRDGHID QGAKGIVLTVEIPDEAILASEFQYWHIVLGNGYIFENYDDEYDDFEDSYFSTEVVRKSWERIFDRTWCEASIANQPNVGL TYQYVTHRIDLMQVRAVMPFVGRGDKWFDRVRGIGWRIGHKLGLIRSKPFKWKA
Sequences:
>Translated_214_residues MGIYYTYQHEAAWHQALEKGYLEASGEHALFMDPDFEDFKMSYDWMVEQYEKRTGISLNGNYPIWCWDEFPDLGRDGHID QGAKGIVLTVEIPDEAILASEFQYWHIVLGNGYIFENYDDEYDDFEDSYFSTEVVRKSWERIFDRTWCEASIANQPNVGL TYQYVTHRIDLMQVRAVMPFVGRGDKWFDRVRGIGWRIGHKLGLIRSKPFKWKA >Mature_213_residues GIYYTYQHEAAWHQALEKGYLEASGEHALFMDPDFEDFKMSYDWMVEQYEKRTGISLNGNYPIWCWDEFPDLGRDGHIDQ GAKGIVLTVEIPDEAILASEFQYWHIVLGNGYIFENYDDEYDDFEDSYFSTEVVRKSWERIFDRTWCEASIANQPNVGLT YQYVTHRIDLMQVRAVMPFVGRGDKWFDRVRGIGWRIGHKLGLIRSKPFKWKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25313; Mature: 25181
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIYYTYQHEAAWHQALEKGYLEASGEHALFMDPDFEDFKMSYDWMVEQYEKRTGISLNG CCEEEEEECHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCEECC NYPIWCWDEFPDLGRDGHIDQGAKGIVLTVEIPDEAILASEFQYWHIVLGNGYIFENYDD CCCEEEECCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHCCCEEEEEEEECCEEECCCCC EYDDFEDSYFSTEVVRKSWERIFDRTWCEASIANQPNVGLTYQYVTHRIDLMQVRAVMPF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHH VGRGDKWFDRVRGIGWRIGHKLGLIRSKPFKWKA CCCCHHHHHHHHCCCHHHHHEECCCCCCCCCCCC >Mature Secondary Structure GIYYTYQHEAAWHQALEKGYLEASGEHALFMDPDFEDFKMSYDWMVEQYEKRTGISLNG CEEEEEECHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCEECC NYPIWCWDEFPDLGRDGHIDQGAKGIVLTVEIPDEAILASEFQYWHIVLGNGYIFENYDD CCCEEEECCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHCCCEEEEEEEECCEEECCCCC EYDDFEDSYFSTEVVRKSWERIFDRTWCEASIANQPNVGLTYQYVTHRIDLMQVRAVMPF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHH VGRGDKWFDRVRGIGWRIGHKLGLIRSKPFKWKA CCCCHHHHHHHHCCCHHHHHEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA