| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229917833
Identifier: 229917833
GI number: 229917833
Start: 2063087
End: 2063665
Strand: Direct
Name: 229917833
Synonym: EAT1b_2111
Alternate gene names: NA
Gene position: 2063087-2063665 (Clockwise)
Preceding gene: 229917832
Following gene: 229917835
Centisome position: 68.77
GC content: 53.71
Gene sequence:
>579_bases ATGAAACTCGGGATCTTAGGTGCCGGGAAAGTCGGACGTACGCTCGGGGAGCAGTTCGAACGAACAGGCTATGAGGTGTT GTATGGGACACGGACTGAGCGAGAAGGGACATTGACGCTACAAGAGGTCGCCTCGACGAGCGATGTCCTATTGCTCTGTA CGCCGTTCGCGGCAGCAGTCGACCTGTTACCGACACTCGACGGACTGGATGGAAAAGTATTGATTGATGTGACGAATCCA ATCGCCATCGAATTTAACGAAGTCGAGCGACCGGACGGGGTGTCGGGTGCGGAGTATTTGCAGCGACTCATTCCTGATAC GAAAGTTGTGAAGGCGTTCAATCAGACAGGGGTCGAGAATTTAGGCGATCCGAATGGGTCCGTCATGTTCGTCGCAGGTG AAGATGAGGAAGCGGTGCGGCTTGTTGTCGAGCTATCGAACAAAATCGGATTCGATACGCATCCGCTCCACGGGCTGAAG CTTGCTCGTGAGCTCGAAGGGTTGGCGTGGCTGTGGATTCATCATGCGGTGAAAGAGCGAAAATCACGGGACTTCGCATT CTACTTAACAGAACGGTGA
Upstream 100 bases:
>100_bases TGTCATGGCGATCGGGGATGAATTCGACCCATCGATTTTAGACGGGCTTGCAGAAGAGTTCGGAGGGACAGTCACGCGGA CAGACGAGGAGCTGTGAGAC
Downstream 100 bases:
>100_bases AAGACGATCGGGGCAAATGCCTCGATCGTCTTTTTGATTAGAATCCTGTATAGCGATCAGAACGTGTTTGAAGCAGCTTA ATCGTCTCGCGCTCAATCTG
Product: NADP oxidoreductase coenzyme F420-dependent
Products: NA
Alternate protein names: Oxidoreductase; NADPH-Dependent; NADp Oxidoreductase Co; Reduced Co; Transmemembrane Reductase Oxidoreductase Protein
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MKLGILGAGKVGRTLGEQFERTGYEVLYGTRTEREGTLTLQEVASTSDVLLLCTPFAAAVDLLPTLDGLDGKVLIDVTNP IAIEFNEVERPDGVSGAEYLQRLIPDTKVVKAFNQTGVENLGDPNGSVMFVAGEDEEAVRLVVELSNKIGFDTHPLHGLK LARELEGLAWLWIHHAVKERKSRDFAFYLTER
Sequences:
>Translated_192_residues MKLGILGAGKVGRTLGEQFERTGYEVLYGTRTEREGTLTLQEVASTSDVLLLCTPFAAAVDLLPTLDGLDGKVLIDVTNP IAIEFNEVERPDGVSGAEYLQRLIPDTKVVKAFNQTGVENLGDPNGSVMFVAGEDEEAVRLVVELSNKIGFDTHPLHGLK LARELEGLAWLWIHHAVKERKSRDFAFYLTER >Mature_192_residues MKLGILGAGKVGRTLGEQFERTGYEVLYGTRTEREGTLTLQEVASTSDVLLLCTPFAAAVDLLPTLDGLDGKVLIDVTNP IAIEFNEVERPDGVSGAEYLQRLIPDTKVVKAFNQTGVENLGDPNGSVMFVAGEDEEAVRLVVELSNKIGFDTHPLHGLK LARELEGLAWLWIHHAVKERKSRDFAFYLTER
Specific function: Unknown
COG id: COG2085
COG function: function code R; Predicted dinucleotide-binding enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI59853425, Length=180, Percent_Identity=32.7777777777778, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI56549147, Length=180, Percent_Identity=32.7777777777778, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI56549145, Length=180, Percent_Identity=32.7777777777778, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI100815815, Length=198, Percent_Identity=29.7979797979798, Blast_Score=72, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21138; Mature: 21138
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLGILGAGKVGRTLGEQFERTGYEVLYGTRTEREGTLTLQEVASTSDVLLLCTPFAAAV CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCEEHHHHCCCCCEEEEECCHHHHH DLLPTLDGLDGKVLIDVTNPIAIEFNEVERPDGVSGAEYLQRLIPDTKVVKAFNQTGVEN HHHHCCCCCCCEEEEEECCCEEEEECCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCHHH LGDPNGSVMFVAGEDEEAVRLVVELSNKIGFDTHPLHGLKLARELEGLAWLWIHHAVKER CCCCCCCEEEEECCCHHHHHHHEEHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHH KSRDFAFYLTER CCCCEEEEEECC >Mature Secondary Structure MKLGILGAGKVGRTLGEQFERTGYEVLYGTRTEREGTLTLQEVASTSDVLLLCTPFAAAV CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCEEHHHHCCCCCEEEEECCHHHHH DLLPTLDGLDGKVLIDVTNPIAIEFNEVERPDGVSGAEYLQRLIPDTKVVKAFNQTGVEN HHHHCCCCCCCEEEEEECCCEEEEECCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCHHH LGDPNGSVMFVAGEDEEAVRLVVELSNKIGFDTHPLHGLKLARELEGLAWLWIHHAVKER CCCCCCCEEEEECCCHHHHHHHEEHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHH KSRDFAFYLTER CCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA