| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is nox [H]
Identifier: 229917826
GI number: 229917826
Start: 2056985
End: 2058331
Strand: Direct
Name: nox [H]
Synonym: EAT1b_2104
Alternate gene names: 229917826
Gene position: 2056985-2058331 (Clockwise)
Preceding gene: 229917821
Following gene: 229917829
Centisome position: 68.57
GC content: 52.49
Gene sequence:
>1347_bases ATGAAAATCGCAGTCATTGGATGTACACACGCAGGAACAGCAGCAGTCAAAGGATTACTCGCCAAGCACGACAATCTCGA TATCACCGTTTACGAGCGGAACGACAACGTCAGTTTCCTCTCGTGTGGGATTGCGCTCCACGTCGGTGGGGTCGTCCAAC GTGCGGAAGAGTTATTCTACTCGTCTCCACGTGAACTTGAAGAACTCGGTGCGACGATGCGCATGAAACATGACGTCTTG TCGATCGACTCCGAAGCGAAAACGGTCCACGCTAAAAATCTTGAGACCGGGGAAGACGTGCATGACACGTATGACCGCTT GATTGTCACGACGGGTTCATGGCCGATCGTCCCAACGCTCCCAGGAATCGAAATGAATGGAATCGAGCTCTGTAAAAACT ACGCGCATGCCCAACGCATCATCGAGCGGGCGACAGATGCGACGAAGATTGCCGTCATCGGGGCGGGTTATATCGGGGTC GAACTCGTCGAGGCGTTCGAAGCATACGGAAAACATGTCACATTTATCGATAGTGCCGACCGCATCTTGAACAAATATCT CGATAAGTCGTTCACAGATCCACTAGAAGCGGACATGACCAGTCGCGGAATCGACCTCGAACTCGGTCAGACGGTCGAGG CATTCCGTGGAACGAGCGGAAATGTCACACATGTCGTAACAGACAAAGGTGAATTCGAAGCGGATCTCGTCATTCTCTGT GTCGGATTCCGTCCGAACACGGGACTGTTAGAAGGGCAAGTCGATATGCTCGGGAACGGTGCCATCATCGTCGATGAATA TATGCGTACGAGCAACCCAGATATCTTTGCAGCAGGGGACAGCTGTGCCGTCTACTATAACCCGGCGCGTACACACGCCT ATATCCCACTTGCGACGAACGCTGTCCGCATGGGAACACTCGTCGCGGAGAACATGATGCAACCACGCGTCCGTTACCAA GGGACACAAGGAACGTCAGGACTTCGACTCTATGACTGGAATATCGCGTCGTCTGGTTTGACGGAAGAAGCGGCAGCACT CTTCGGACTCGAAGTGGAGAGTGTCGTCATCGAGGACGCGTATCGTCCGGAGTTCATGCCGACCGCAGAGAAAGTCGAAT TCAAACTCGTCTATGAAAAAGAGACGCATCGCATTGTCGGTGGACAAGTGTTATCGAAAGCAGATTTGACGCAAGCGGTC AACACGCTCTCGCTAGCCATCCAAAACGAGATGACGATCGAAGAGCTCGCCTATGTCGACTTCTTCTTCCAACCACACTA CAACAAGCCATGGCACTTCCTGAACAGCGGGGCGCTTGAAGCGATGAAAGACAAAGTGAATGCCTAA
Upstream 100 bases:
>100_bases TATATTGTGAAATAGTACACTAAGGTCAAGAAGTAAATGTGATATTTATCACAATATAAAACGAAACGTACTGTCTAACA TAAAAGGAGAGACGACTCAT
Downstream 100 bases:
>100_bases CAAAAAACGCGGAAGCTCATGGCTTCTGCGTTTTTTATAGATAAAGTGGCGCATCTTTCATGGAATTCGTCAAAATCATA TAAAGCAAGAAACTCCCTGG
Product: FAD-dependent pyridine nucleotide-disulphide oxidoreductase
Products: NA
Alternate protein names: NOXase [H]
Number of amino acids: Translated: 448; Mature: 448
Protein sequence:
>448_residues MKIAVIGCTHAGTAAVKGLLAKHDNLDITVYERNDNVSFLSCGIALHVGGVVQRAEELFYSSPRELEELGATMRMKHDVL SIDSEAKTVHAKNLETGEDVHDTYDRLIVTTGSWPIVPTLPGIEMNGIELCKNYAHAQRIIERATDATKIAVIGAGYIGV ELVEAFEAYGKHVTFIDSADRILNKYLDKSFTDPLEADMTSRGIDLELGQTVEAFRGTSGNVTHVVTDKGEFEADLVILC VGFRPNTGLLEGQVDMLGNGAIIVDEYMRTSNPDIFAAGDSCAVYYNPARTHAYIPLATNAVRMGTLVAENMMQPRVRYQ GTQGTSGLRLYDWNIASSGLTEEAAALFGLEVESVVIEDAYRPEFMPTAEKVEFKLVYEKETHRIVGGQVLSKADLTQAV NTLSLAIQNEMTIEELAYVDFFFQPHYNKPWHFLNSGALEAMKDKVNA
Sequences:
>Translated_448_residues MKIAVIGCTHAGTAAVKGLLAKHDNLDITVYERNDNVSFLSCGIALHVGGVVQRAEELFYSSPRELEELGATMRMKHDVL SIDSEAKTVHAKNLETGEDVHDTYDRLIVTTGSWPIVPTLPGIEMNGIELCKNYAHAQRIIERATDATKIAVIGAGYIGV ELVEAFEAYGKHVTFIDSADRILNKYLDKSFTDPLEADMTSRGIDLELGQTVEAFRGTSGNVTHVVTDKGEFEADLVILC VGFRPNTGLLEGQVDMLGNGAIIVDEYMRTSNPDIFAAGDSCAVYYNPARTHAYIPLATNAVRMGTLVAENMMQPRVRYQ GTQGTSGLRLYDWNIASSGLTEEAAALFGLEVESVVIEDAYRPEFMPTAEKVEFKLVYEKETHRIVGGQVLSKADLTQAV NTLSLAIQNEMTIEELAYVDFFFQPHYNKPWHFLNSGALEAMKDKVNA >Mature_448_residues MKIAVIGCTHAGTAAVKGLLAKHDNLDITVYERNDNVSFLSCGIALHVGGVVQRAEELFYSSPRELEELGATMRMKHDVL SIDSEAKTVHAKNLETGEDVHDTYDRLIVTTGSWPIVPTLPGIEMNGIELCKNYAHAQRIIERATDATKIAVIGAGYIGV ELVEAFEAYGKHVTFIDSADRILNKYLDKSFTDPLEADMTSRGIDLELGQTVEAFRGTSGNVTHVVTDKGEFEADLVILC VGFRPNTGLLEGQVDMLGNGAIIVDEYMRTSNPDIFAAGDSCAVYYNPARTHAYIPLATNAVRMGTLVAENMMQPRVRYQ GTQGTSGLRLYDWNIASSGLTEEAAALFGLEVESVVIEDAYRPEFMPTAEKVEFKLVYEKETHRIVGGQVLSKADLTQAV NTLSLAIQNEMTIEELAYVDFFFQPHYNKPWHFLNSGALEAMKDKVNA
Specific function: Catalyzes the four-electron reduction of molecular oxygen to water [H]
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-III pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Homo sapiens, GI21389617, Length=215, Percent_Identity=23.7209302325581, Blast_Score=70, Evalue=4e-12, Organism=Homo sapiens, GI226437568, Length=215, Percent_Identity=23.7209302325581, Blast_Score=70, Evalue=5e-12, Organism=Homo sapiens, GI65787454, Length=215, Percent_Identity=23.7209302325581, Blast_Score=70, Evalue=6e-12, Organism=Escherichia coli, GI1789065, Length=283, Percent_Identity=29.3286219081272, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI1789765, Length=348, Percent_Identity=24.1379310344828, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1786307, Length=466, Percent_Identity=23.3905579399142, Blast_Score=63, Evalue=4e-11, Organism=Escherichia coli, GI1789915, Length=211, Percent_Identity=29.8578199052133, Blast_Score=62, Evalue=6e-11, Organism=Caenorhabditis elegans, GI17559934, Length=230, Percent_Identity=28.695652173913, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI24585130, Length=233, Percent_Identity=21.4592274678112, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI21358499, Length=290, Percent_Identity=27.5862068965517, Blast_Score=66, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR004099 - InterPro: IPR001327 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.6.99.3 [H]
Molecular weight: Translated: 49270; Mature: 49270
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIAVIGCTHAGTAAVKGLLAKHDNLDITVYERNDNVSFLSCGIALHVGGVVQRAEELFY CEEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCEEEEEECHHHHHHHHHHHHHHHHC SSPRELEELGATMRMKHDVLSIDSEAKTVHAKNLETGEDVHDTYDRLIVTTGSWPIVPTL CCCHHHHHHCHHHHHHHHHEECCCCCCEEEECCCCCCCHHHHHCCEEEEECCCCCCEECC PGIEMNGIELCKNYAHAQRIIERATDATKIAVIGAGYIGVELVEAFEAYGKHVTFIDSAD CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHCCEEEEECCHH RILNKYLDKSFTDPLEADMTSRGIDLELGQTVEAFRGTSGNVTHVVTDKGEFEADLVILC HHHHHHHHHCCCCCHHHHHHCCCCEEECCCHHHHHCCCCCCEEEEEECCCCCCCEEEEEE VGFRPNTGLLEGQVDMLGNGAIIVDEYMRTSNPDIFAAGDSCAVYYNPARTHAYIPLATN EECCCCCCCCCCCCEEECCCEEEEEHHHHCCCCCEEECCCCEEEEECCCCCEEEEEEECC AVRMGTLVAENMMQPRVRYQGTQGTSGLRLYDWNIASSGLTEEAAALFGLEVESVVIEDA HHHHHHHHHHHHHCCCCEECCCCCCCCEEEEEECCCCCCCCHHHHHHHCCCHHEEEEECC YRPEFMPTAEKVEFKLVYEKETHRIVGGQVLSKADLTQAVNTLSLAIQNEMTIEELAYVD CCCCCCCCHHHEEEEEEEECCCCEEECCHHHHHHHHHHHHHHHHEEECCCCCHHHHHEEE FFFQPHYNKPWHFLNSGALEAMKDKVNA EEECCCCCCCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure MKIAVIGCTHAGTAAVKGLLAKHDNLDITVYERNDNVSFLSCGIALHVGGVVQRAEELFY CEEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCEEEEEECHHHHHHHHHHHHHHHHC SSPRELEELGATMRMKHDVLSIDSEAKTVHAKNLETGEDVHDTYDRLIVTTGSWPIVPTL CCCHHHHHHCHHHHHHHHHEECCCCCCEEEECCCCCCCHHHHHCCEEEEECCCCCCEECC PGIEMNGIELCKNYAHAQRIIERATDATKIAVIGAGYIGVELVEAFEAYGKHVTFIDSAD CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHCCEEEEECCHH RILNKYLDKSFTDPLEADMTSRGIDLELGQTVEAFRGTSGNVTHVVTDKGEFEADLVILC HHHHHHHHHCCCCCHHHHHHCCCCEEECCCHHHHHCCCCCCEEEEEECCCCCCCEEEEEE VGFRPNTGLLEGQVDMLGNGAIIVDEYMRTSNPDIFAAGDSCAVYYNPARTHAYIPLATN EECCCCCCCCCCCCEEECCCEEEEEHHHHCCCCCEEECCCCEEEEECCCCCEEEEEEECC AVRMGTLVAENMMQPRVRYQGTQGTSGLRLYDWNIASSGLTEEAAALFGLEVESVVIEDA HHHHHHHHHHHHHCCCCEECCCCCCCCEEEEEECCCCCCCCHHHHHHHCCCHHEEEEECC YRPEFMPTAEKVEFKLVYEKETHRIVGGQVLSKADLTQAVNTLSLAIQNEMTIEELAYVD CCCCCCCCHHHEEEEEEEECCCCEEECCHHHHHHHHHHHHHHHHEEECCCCCHHHHHEEE FFFQPHYNKPWHFLNSGALEAMKDKVNA EEECCCCCCCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1404382; 12663927; 2511195; 8262333 [H]