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The map label for this gene is ydiC [H]

Identifier: 229917807

GI number: 229917807

Start: 2040644

End: 2041300

Strand: Direct

Name: ydiC [H]

Synonym: EAT1b_2085

Alternate gene names: 229917807

Gene position: 2040644-2041300 (Clockwise)

Preceding gene: 229917806

Following gene: 229917808

Centisome position: 68.02

GC content: 52.05

Gene sequence:

>657_bases
ATGAAGCAATTGATGATTGATACGGCGACGACACGTTTGTCAGTCGCGTTAAGTGAGGCTGGAGAGATTCAAGCCGAAGC
GACGGTCATGGTCTCAAAAAACCATGCGGTCACACTCATGCCGATGATTGAACAGCTCATGGCAGCGGTCAAGTGGACAC
CGAACATGCTCGAACGCATCATAGTCACGACCGGACCTGGGTCGTACACGGGAATTCGGATTGGAGTGACGACAGCGAAG
ACACTCGCTTATACGCTCAATCTTCCACTCATCGGTGTATCTGCCCTTCAGATCATGGCAGCGGCCCCGAATACCGATTT
GCCGGTCGTTTCATTGATTGACGCGCGCCGTGGCAACGCGTATATCGGATATTATCAACACAACAAAGCACTAACACATG
ATCAGCACGCCTCCGTCTCAGATTGGTTGCGACTGAATAGTCAAGGGCGCTTCCTTGTCGTCGGAGACGTGGAACCGTTC
CGTGACGTGTTAAGTGAATATGACTATATCGAAGCACCGGCTGCCCATCGATATGGGCGTGCGAGTGATTTGGTCGTCTT
CAGCGATGAGACGAGCGATGTTCACTCGTTTGAACCGGAGTATTTGCGACTCGCCGAGGCGGAAGCGAAATGGTTAGAGG
GACAAAACAATGGCTGA

Upstream 100 bases:

>100_bases
GCTTGGCCATCACGATTGAACGGGTCGGCGACGAAGAACGTAAACTGACACTTGCTCCGACGGGTGAGCGTTACGTTCAA
ATCGCCAAGGAGGTGCTCGC

Downstream 100 bases:

>100_bases
CGTGAAAATTCGTCGGATGACGTGGCTTGATGTCGAGGAAGTGACGAAAGTCGAAGAAGCGTCGTTCGCCATCCCGTGGA
CAAAAGAGGCGTTCATGAAT

Product: peptidase M22 glycoprotease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MKQLMIDTATTRLSVALSEAGEIQAEATVMVSKNHAVTLMPMIEQLMAAVKWTPNMLERIIVTTGPGSYTGIRIGVTTAK
TLAYTLNLPLIGVSALQIMAAAPNTDLPVVSLIDARRGNAYIGYYQHNKALTHDQHASVSDWLRLNSQGRFLVVGDVEPF
RDVLSEYDYIEAPAAHRYGRASDLVVFSDETSDVHSFEPEYLRLAEAEAKWLEGQNNG

Sequences:

>Translated_218_residues
MKQLMIDTATTRLSVALSEAGEIQAEATVMVSKNHAVTLMPMIEQLMAAVKWTPNMLERIIVTTGPGSYTGIRIGVTTAK
TLAYTLNLPLIGVSALQIMAAAPNTDLPVVSLIDARRGNAYIGYYQHNKALTHDQHASVSDWLRLNSQGRFLVVGDVEPF
RDVLSEYDYIEAPAAHRYGRASDLVVFSDETSDVHSFEPEYLRLAEAEAKWLEGQNNG
>Mature_218_residues
MKQLMIDTATTRLSVALSEAGEIQAEATVMVSKNHAVTLMPMIEQLMAAVKWTPNMLERIIVTTGPGSYTGIRIGVTTAK
TLAYTLNLPLIGVSALQIMAAAPNTDLPVVSLIDARRGNAYIGYYQHNKALTHDQHASVSDWLRLNSQGRFLVVGDVEPF
RDVLSEYDYIEAPAAHRYGRASDLVVFSDETSDVHSFEPEYLRLAEAEAKWLEGQNNG

Specific function: Unknown

COG id: COG1214

COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M22 family [H]

Homologues:

Organism=Escherichia coli, GI1788109, Length=132, Percent_Identity=35.6060606060606, Blast_Score=78, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022496
- InterPro:   IPR000905 [H]

Pfam domain/function: PF00814 Peptidase_M22 [H]

EC number: NA

Molecular weight: Translated: 23981; Mature: 23981

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQLMIDTATTRLSVALSEAGEIQAEATVMVSKNHAVTLMPMIEQLMAAVKWTPNMLERI
CCCEEEECCHHEEEEEECCCCCCEEEEEEEEECCCCEEHHHHHHHHHHHHCCCHHHHEEE
IVTTGPGSYTGIRIGVTTAKTLAYTLNLPLIGVSALQIMAAAPNTDLPVVSLIDARRGNA
EEECCCCCEEEEEEEEEEHEEEEEEECCCEECHHHHEEEEECCCCCCCEEEEEECCCCCE
YIGYYQHNKALTHDQHASVSDWLRLNSQGRFLVVGDVEPFRDVLSEYDYIEAPAAHRYGR
EEEEEECCCCCCCCCCCCHHHHHEECCCCCEEEEECCHHHHHHHHHCCCCCCCCHHCCCC
ASDLVVFSDETSDVHSFEPEYLRLAEAEAKWLEGQNNG
CCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKQLMIDTATTRLSVALSEAGEIQAEATVMVSKNHAVTLMPMIEQLMAAVKWTPNMLERI
CCCEEEECCHHEEEEEECCCCCCEEEEEEEEECCCCEEHHHHHHHHHHHHCCCHHHHEEE
IVTTGPGSYTGIRIGVTTAKTLAYTLNLPLIGVSALQIMAAAPNTDLPVVSLIDARRGNA
EEECCCCCEEEEEEEEEEHEEEEEEECCCEECHHHHEEEEECCCCCCCEEEEEECCCCCE
YIGYYQHNKALTHDQHASVSDWLRLNSQGRFLVVGDVEPFRDVLSEYDYIEAPAAHRYGR
EEEEEECCCCCCCCCCCCHHHHHEECCCCCEEEEECCHHHHHHHHHCCCCCCCCHHCCCC
ASDLVVFSDETSDVHSFEPEYLRLAEAEAKWLEGQNNG
CCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]