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The map label for this gene is ydiB [H]

Identifier: 229917806

GI number: 229917806

Start: 2040198

End: 2040647

Strand: Direct

Name: ydiB [H]

Synonym: EAT1b_2084

Alternate gene names: 229917806

Gene position: 2040198-2040647 (Clockwise)

Preceding gene: 229917804

Following gene: 229917807

Centisome position: 68.01

GC content: 53.11

Gene sequence:

>450_bases
ATGTATACATTGATTACGCATTCTGCAGCGGAGACGCAGGCGGTGGCAGAACGTTTGGCCACACTCGTCGAAGCAGGGAC
GGTCATCACGTTAAACGGTGACCTCGGTGCCGGCAAAACGACGTTCACACAAGGGTTCGCAAAAGGACTCGGTGTCACGC
GGAACGTCAACAGTCCGACCTTCACCATTATGAAACAATATAAAGGGCGATTGCCGCTCTATCATATGGATGTCTATCGT
CTCGAAGATACGGGGGATGACATCGGTCTTGAGGAATATATCAACGGTGATGGTGTCGCCATCGTCGAGTGGTCGAACTT
GATCGAGTCCTCCCTCCCGGAAGAACGCTTGGCCATCACGATTGAACGGGTCGGCGACGAAGAACGTAAACTGACACTTG
CTCCGACGGGTGAGCGTTACGTTCAAATCGCCAAGGAGGTGCTCGCATGA

Upstream 100 bases:

>100_bases
TTTTAAATGAGATAGCGAAACGATAGCGTTTCGTGTTTTTTTTTGCTTAAAATGAAGTGTACAATGAGTACGTATGAGAA
GTGAAAAAGGAGAACCATTC

Downstream 100 bases:

>100_bases
AGCAATTGATGATTGATACGGCGACGACACGTTTGTCAGTCGCGTTAAGTGAGGCTGGAGAGATTCAAGCCGAAGCGACG
GTCATGGTCTCAAAAAACCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MYTLITHSAAETQAVAERLATLVEAGTVITLNGDLGAGKTTFTQGFAKGLGVTRNVNSPTFTIMKQYKGRLPLYHMDVYR
LEDTGDDIGLEEYINGDGVAIVEWSNLIESSLPEERLAITIERVGDEERKLTLAPTGERYVQIAKEVLA

Sequences:

>Translated_149_residues
MYTLITHSAAETQAVAERLATLVEAGTVITLNGDLGAGKTTFTQGFAKGLGVTRNVNSPTFTIMKQYKGRLPLYHMDVYR
LEDTGDDIGLEEYINGDGVAIVEWSNLIESSLPEERLAITIERVGDEERKLTLAPTGERYVQIAKEVLA
>Mature_149_residues
MYTLITHSAAETQAVAERLATLVEAGTVITLNGDLGAGKTTFTQGFAKGLGVTRNVNSPTFTIMKQYKGRLPLYHMDVYR
LEDTGDDIGLEEYINGDGVAIVEWSNLIESSLPEERLAITIERVGDEERKLTLAPTGERYVQIAKEVLA

Specific function: Displays ATPase activity, which is modulated by the oligomeric status of the protein. The physiological partner is unknown [H]

COG id: COG0802

COG function: function code R; Predicted ATPase or kinase

Gene ontology:

Cell location: Cytoplasm. Note=Localized predominantly at the cell poles and at the periphery of the bacterium [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0079 family [H]

Homologues:

Organism=Escherichia coli, GI1790610, Length=132, Percent_Identity=39.3939393939394, Blast_Score=89, Evalue=8e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003442 [H]

Pfam domain/function: PF02367 UPF0079 [H]

EC number: NA

Molecular weight: Translated: 16334; Mature: 16334

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTLITHSAAETQAVAERLATLVEAGTVITLNGDLGAGKTTFTQGFAKGLGVTRNVNSPT
CEEEEECCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCH
FTIMKQYKGRLPLYHMDVYRLEDTGDDIGLEEYINGDGVAIVEWSNLIESSLPEERLAIT
HHHHHHHCCCCCEEEEEEEEECCCCCCCCHHHHCCCCCEEEEEHHHHHHHCCCHHHHEEE
IERVGDEERKLTLAPTGERYVQIAKEVLA
EECCCCCCCEEEECCCCHHHHHHHHHHHC
>Mature Secondary Structure
MYTLITHSAAETQAVAERLATLVEAGTVITLNGDLGAGKTTFTQGFAKGLGVTRNVNSPT
CEEEEECCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCH
FTIMKQYKGRLPLYHMDVYRLEDTGDDIGLEEYINGDGVAIVEWSNLIESSLPEERLAIT
HHHHHHHCCCCCEEEEEEEEECCCCCCCCHHHHCCCCCEEEEEHHHHHHHCCCHHHHEEE
IERVGDEERKLTLAPTGERYVQIAKEVLA
EECCCCCCCEEEECCCCHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]