| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is merA [H]
Identifier: 229917738
GI number: 229917738
Start: 1967490
End: 1968914
Strand: Direct
Name: merA [H]
Synonym: EAT1b_2015
Alternate gene names: 229917738
Gene position: 1967490-1968914 (Clockwise)
Preceding gene: 229917737
Following gene: 229917742
Centisome position: 65.59
GC content: 51.37
Gene sequence:
>1425_bases ATGAAGGACTATCAGTTGATTGTCATCGGTGGTGGTGCTGCCGGGATGACAGTGGCCGCAGGGGCTGCGAATTTAGGCGC GAAAGTCGCGCTTGTTGAAAAGAACAAGCATTTAGGTGGTGACTGTCTGCATGTCGGATGTGTGCCATCGAAAGCGTTGA TTGCTGCTTCAAAAGAAGCGAATGCGATGATGCGCGCGGCCCGAGTTCTCGGAACCGAGTTCAATGGACAAGAGCATTAT CAAATGTCAAAAGCGCGTGTCGACAAAGCACGTGCCATTATTCAAGACCATGACGGAACAGAACGTTTTGAAAAGATTGG CGTCGACGTCTATATCGGAGAAGCCTCGTTCCAAAGTCCGCACGAATTAAAAGTAGGGAACGAGTTATTGATCGGGAAAA AATTTGTCATCTCGACGGGGTCGAAACCGACAGTTCCTCCAATTGATGGACTCGATCAAGTCCCATACTTAACGAACGAA ACGGTCTTTGAAGAAGAGACGCTCCCGGAGAGCCTGATTGTCATCGGCGCCGGAACGGTCGGGCTTGAATTGGCCCAGTC CTTTGTCCGACTCGGCTCACAAGTGACCGTGCTCGAGGCGCAGGATGATTTCCTACCTAAAGAAGACGAGGACGTCGCCA CCTATTTGAAATCTCAACTCGAGATGGCGATGCGCCTAAAAATCGGCGTAAAGGTCAATCGAGTCGATGAGGTCGATGGC CGCATTCGTGTCACGACAGAGGTGAACGGCGAAACGGTCGAATATGAAGCGGACAAACTGCTGATGGCGACAGGTCGCGT TCCCCGAATCGATGCGCTCCGTCTCGACCGGGCGAACGTTCAGGTGACGAAAGGGTATATCGATGTCTCGTCGTCATATC GGACGTCACAATCTCATATCTTTGCCATTGGCGATACGATCAAAACGCTCCCATTCACACATGCCGCTGGAGAAGAAGGG AAGGCGGTTGTCGCGAACGCGCTCTTTGGATTATGGAACAAGGTCGACTACAGCAAGCTCCCGTGGATCACATTCACAGA TCCTGAGGTGTTCCATGTCGGGATGACAGAGAAAGAAGCGCGCGAGCGTTACGGCGACGACATTGAGACGTATGAAGCGA AACTGTCCGAAGTGGACCGCTTCATTGCTGAACGCCAAGAAGCAGGATTTGTCAAAGTGATCACGAAGAAAAACGGAAAA ATCATCGGAGCACATGCAGTCGGTGAATCGGCGGGGGATTGGATGCAAATTGTCGTCTATGCGATGCAACGTGGCGACAA AATCGGGAAGCTGTCCCGTATGATTTACCCGTATCCGTCGCGAAGTGAGGCCGTGAAGAAAGTGACAGACCTTTACTGGC GGAAACGTTTGTTCGAAAGTCCGCTCACCGAACTTGCGAGACGCTACTTTAAATTGGTGCAATAA
Upstream 100 bases:
>100_bases AAGTCGAGTTTCGATCTGCGTCGCGTGTCGGCTATTCAGACTTTGGCGTGAATCGAAAACGAATGGAAGATGTGAGCGAA CGATACCGGAGGTTGATTCG
Downstream 100 bases:
>100_bases CACAAATCACCCACTCCAACGAGTGGGTGATTATTAGTTTGGTAAGGTGATGGTTTCAATCATCTTCGGTTCGCCTTCAG AAAGGTCGACGAGTGGTTTG
Product: pyridine nucleotide-disulphide oxidoreductase dimerisation region
Products: NA
Alternate protein names: Hg(II) reductase [H]
Number of amino acids: Translated: 474; Mature: 474
Protein sequence:
>474_residues MKDYQLIVIGGGAAGMTVAAGAANLGAKVALVEKNKHLGGDCLHVGCVPSKALIAASKEANAMMRAARVLGTEFNGQEHY QMSKARVDKARAIIQDHDGTERFEKIGVDVYIGEASFQSPHELKVGNELLIGKKFVISTGSKPTVPPIDGLDQVPYLTNE TVFEEETLPESLIVIGAGTVGLELAQSFVRLGSQVTVLEAQDDFLPKEDEDVATYLKSQLEMAMRLKIGVKVNRVDEVDG RIRVTTEVNGETVEYEADKLLMATGRVPRIDALRLDRANVQVTKGYIDVSSSYRTSQSHIFAIGDTIKTLPFTHAAGEEG KAVVANALFGLWNKVDYSKLPWITFTDPEVFHVGMTEKEARERYGDDIETYEAKLSEVDRFIAERQEAGFVKVITKKNGK IIGAHAVGESAGDWMQIVVYAMQRGDKIGKLSRMIYPYPSRSEAVKKVTDLYWRKRLFESPLTELARRYFKLVQ
Sequences:
>Translated_474_residues MKDYQLIVIGGGAAGMTVAAGAANLGAKVALVEKNKHLGGDCLHVGCVPSKALIAASKEANAMMRAARVLGTEFNGQEHY QMSKARVDKARAIIQDHDGTERFEKIGVDVYIGEASFQSPHELKVGNELLIGKKFVISTGSKPTVPPIDGLDQVPYLTNE TVFEEETLPESLIVIGAGTVGLELAQSFVRLGSQVTVLEAQDDFLPKEDEDVATYLKSQLEMAMRLKIGVKVNRVDEVDG RIRVTTEVNGETVEYEADKLLMATGRVPRIDALRLDRANVQVTKGYIDVSSSYRTSQSHIFAIGDTIKTLPFTHAAGEEG KAVVANALFGLWNKVDYSKLPWITFTDPEVFHVGMTEKEARERYGDDIETYEAKLSEVDRFIAERQEAGFVKVITKKNGK IIGAHAVGESAGDWMQIVVYAMQRGDKIGKLSRMIYPYPSRSEAVKKVTDLYWRKRLFESPLTELARRYFKLVQ >Mature_474_residues MKDYQLIVIGGGAAGMTVAAGAANLGAKVALVEKNKHLGGDCLHVGCVPSKALIAASKEANAMMRAARVLGTEFNGQEHY QMSKARVDKARAIIQDHDGTERFEKIGVDVYIGEASFQSPHELKVGNELLIGKKFVISTGSKPTVPPIDGLDQVPYLTNE TVFEEETLPESLIVIGAGTVGLELAQSFVRLGSQVTVLEAQDDFLPKEDEDVATYLKSQLEMAMRLKIGVKVNRVDEVDG RIRVTTEVNGETVEYEADKLLMATGRVPRIDALRLDRANVQVTKGYIDVSSSYRTSQSHIFAIGDTIKTLPFTHAAGEEG KAVVANALFGLWNKVDYSKLPWITFTDPEVFHVGMTEKEARERYGDDIETYEAKLSEVDRFIAERQEAGFVKVITKKNGK IIGAHAVGESAGDWMQIVVYAMQRGDKIGKLSRMIYPYPSRSEAVKKVTDLYWRKRLFESPLTELARRYFKLVQ
Specific function: Resistance to Hg(2+) in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg(0) [H]
COG id: COG1249
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 HMA domains [H]
Homologues:
Organism=Homo sapiens, GI91199540, Length=465, Percent_Identity=28.1720430107527, Blast_Score=159, Evalue=5e-39, Organism=Homo sapiens, GI50301238, Length=469, Percent_Identity=28.1449893390192, Blast_Score=153, Evalue=3e-37, Organism=Homo sapiens, GI22035672, Length=474, Percent_Identity=27.8481012658228, Blast_Score=123, Evalue=3e-28, Organism=Homo sapiens, GI33519430, Length=482, Percent_Identity=26.9709543568465, Blast_Score=122, Evalue=9e-28, Organism=Homo sapiens, GI33519428, Length=482, Percent_Identity=26.9709543568465, Blast_Score=122, Evalue=9e-28, Organism=Homo sapiens, GI33519426, Length=482, Percent_Identity=26.9709543568465, Blast_Score=122, Evalue=9e-28, Organism=Homo sapiens, GI148277065, Length=482, Percent_Identity=26.9709543568465, Blast_Score=122, Evalue=1e-27, Organism=Homo sapiens, GI148277071, Length=482, Percent_Identity=26.9709543568465, Blast_Score=122, Evalue=1e-27, Organism=Homo sapiens, GI291045266, Length=473, Percent_Identity=28.7526427061311, Blast_Score=117, Evalue=2e-26, Organism=Homo sapiens, GI291045268, Length=470, Percent_Identity=26.3829787234043, Blast_Score=88, Evalue=2e-17, Organism=Escherichia coli, GI1786307, Length=480, Percent_Identity=31.25, Blast_Score=187, Evalue=1e-48, Organism=Escherichia coli, GI87081717, Length=462, Percent_Identity=29.004329004329, Blast_Score=181, Evalue=1e-46, Organism=Escherichia coli, GI87082354, Length=477, Percent_Identity=25.9958071278826, Blast_Score=138, Evalue=8e-34, Organism=Escherichia coli, GI1789915, Length=439, Percent_Identity=28.7015945330296, Blast_Score=137, Evalue=1e-33, Organism=Escherichia coli, GI1789065, Length=210, Percent_Identity=28.0952380952381, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI32565766, Length=460, Percent_Identity=28.9130434782609, Blast_Score=172, Evalue=5e-43, Organism=Caenorhabditis elegans, GI17557007, Length=501, Percent_Identity=27.9441117764471, Blast_Score=147, Evalue=8e-36, Organism=Caenorhabditis elegans, GI71982272, Length=494, Percent_Identity=27.5303643724696, Blast_Score=122, Evalue=5e-28, Organism=Caenorhabditis elegans, GI71983429, Length=432, Percent_Identity=26.1574074074074, Blast_Score=114, Evalue=2e-25, Organism=Caenorhabditis elegans, GI71983419, Length=432, Percent_Identity=26.1574074074074, Blast_Score=113, Evalue=2e-25, Organism=Saccharomyces cerevisiae, GI6321091, Length=478, Percent_Identity=30.5439330543933, Blast_Score=174, Evalue=4e-44, Organism=Saccharomyces cerevisiae, GI6325166, Length=475, Percent_Identity=29.0526315789474, Blast_Score=138, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6325240, Length=480, Percent_Identity=25.8333333333333, Blast_Score=132, Evalue=1e-31, Organism=Drosophila melanogaster, GI21358499, Length=454, Percent_Identity=29.7356828193833, Blast_Score=176, Evalue=4e-44, Organism=Drosophila melanogaster, GI24640549, Length=470, Percent_Identity=28.5106382978723, Blast_Score=147, Evalue=2e-35, Organism=Drosophila melanogaster, GI24640553, Length=470, Percent_Identity=28.5106382978723, Blast_Score=146, Evalue=2e-35, Organism=Drosophila melanogaster, GI24640551, Length=475, Percent_Identity=28.2105263157895, Blast_Score=146, Evalue=4e-35, Organism=Drosophila melanogaster, GI17737741, Length=475, Percent_Identity=27.7894736842105, Blast_Score=136, Evalue=4e-32,
Paralogues:
None
Copy number: 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1880 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 6,000 Molecules/Cell In: Glucose minimal
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR017969 - InterPro: IPR006121 - InterPro: IPR000815 - InterPro: IPR021179 - InterPro: IPR004099 - InterPro: IPR012999 - InterPro: IPR001327 [H]
Pfam domain/function: PF00403 HMA; PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.16.1.1 [H]
Molecular weight: Translated: 52368; Mature: 52368
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: PS00076 PYRIDINE_REDOX_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDYQLIVIGGGAAGMTVAAGAANLGAKVALVEKNKHLGGDCLHVGCVPSKALIAASKEA CCCEEEEEEECCCCCCEEECCCCCCCCEEEEEECCCCCCCCEEEECCCCCHHHEEECHHH NAMMRAARVLGTEFNGQEHYQMSKARVDKARAIIQDHDGTERFEKIGVDVYIGEASFQSP HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEECCCCCCCC HELKVGNELLIGKKFVISTGSKPTVPPIDGLDQVPYLTNETVFEEETLPESLIVIGAGTV CCCCCCCEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCEEEEEECCHH GLELAQSFVRLGSQVTVLEAQDDFLPKEDEDVATYLKSQLEMAMRLKIGVKVNRVDEVDG HHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHEEECEEEECEECCCC RIRVTTEVNGETVEYEADKLLMATGRVPRIDALRLDRANVQVTKGYIDVSSSYRTSQSHI EEEEEEECCCCEEEECCCEEEEECCCCCCCCEEEECCCCEEEEEEEEEECCCCCCCCCEE FAIGDTIKTLPFTHAAGEEGKAVVANALFGLWNKVDYSKLPWITFTDPEVFHVGMTEKEA EEECCCHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEEECCCHHHH RERYGDDIETYEAKLSEVDRFIAERQEAGFVKVITKKNGKIIGAHAVGESAGDWMQIVVY HHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEEECCCCCCHHHHHHHH AMQRGDKIGKLSRMIYPYPSRSEAVKKVTDLYWRKRLFESPLTELARRYFKLVQ HHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCC >Mature Secondary Structure MKDYQLIVIGGGAAGMTVAAGAANLGAKVALVEKNKHLGGDCLHVGCVPSKALIAASKEA CCCEEEEEEECCCCCCEEECCCCCCCCEEEEEECCCCCCCCEEEECCCCCHHHEEECHHH NAMMRAARVLGTEFNGQEHYQMSKARVDKARAIIQDHDGTERFEKIGVDVYIGEASFQSP HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEECCCCCCCC HELKVGNELLIGKKFVISTGSKPTVPPIDGLDQVPYLTNETVFEEETLPESLIVIGAGTV CCCCCCCEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCEEEEEECCHH GLELAQSFVRLGSQVTVLEAQDDFLPKEDEDVATYLKSQLEMAMRLKIGVKVNRVDEVDG HHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHEEECEEEECEECCCC RIRVTTEVNGETVEYEADKLLMATGRVPRIDALRLDRANVQVTKGYIDVSSSYRTSQSHI EEEEEEECCCCEEEECCCEEEEECCCCCCCCEEEECCCCEEEEEEEEEECCCCCCCCCEE FAIGDTIKTLPFTHAAGEEGKAVVANALFGLWNKVDYSKLPWITFTDPEVFHVGMTEKEA EEECCCHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEEECCCHHHH RERYGDDIETYEAKLSEVDRFIAERQEAGFVKVITKKNGKIIGAHAVGESAGDWMQIVVY HHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEEECCCCCCHHHHHHHH AMQRGDKIGKLSRMIYPYPSRSEAVKKVTDLYWRKRLFESPLTELARRYFKLVQ HHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2536669; 10559175; 2067577 [H]