| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is ppaC
Identifier: 229917691
GI number: 229917691
Start: 1926696
End: 1927625
Strand: Direct
Name: ppaC
Synonym: EAT1b_1968
Alternate gene names: 229917691
Gene position: 1926696-1927625 (Clockwise)
Preceding gene: 229917690
Following gene: 229917699
Centisome position: 64.23
GC content: 49.89
Gene sequence:
>930_bases ATGAGTACAGTACTAGTCTTCGGACATAAAAATCCAGATACCGACACAATCACATCAGCGCTCGCCTATGCCGAGTTGAA AAAGAAATTAGGGATGGACGCAGAAGCGGTCCGTCTCGGTGAAGTGAACGGCGAAACACAATATGCGCTCGATCACTTCC GTGTGAAAGCACCACGATTGATCGAGAGTGTGAAAGGTGAGGCGGAAGAAGTTATCTTGGTCGACCATAACGAGTTCCAG CAAAGTGCGGACGGGATTGAAGACGTGCGAATCCTTGAGGTCATCGACCACCACCGTATCGCAAACTTCCAAACGGCAGA CCCGCTCTACTATCGTGCGGAGCCAGTCGGATGTACGGCGACAATCTTGTTGAAGTTGTATAAAGAGCATGGTGTCGAAA TCGCAGCGGATATGGCCGGCTTAATGCTTTCGGCCATCATCTCAGACTCGCTTCTCTTCAAATCGCCGACATGCACAGAT GAAGATATCAAAGCAGCGAAAGAACTTGCGGAGATTGCTGGCGTCGATGCGGAAACATACGGTCTTGAGATGCTCAAAGC CGGTGCGGACCTTAGCCAAAAAACGATTGAAGAACTCATCTCACTCGATGCGAAAGAATTCGCGATGGGCGACTATCGTG TCGAAATCGCACAAGTGAACACGGTCGATGCGAATGATGTCTTGAACCGGAAAGCGGAAGTCGAGGCGGCCATTGCCAAC ACGGTTGCGGCGAAAAACTTAGACTTGTTCGTATTCGCCATCACGAACATTTTGACGAACGATTCGGAAGCCATCGTTGT CGGACCAAAACCAGAACTCTTCGAACAAGCGTTCAACGTGACCCTTCAAAACGGATTGGCGACACTTCCTGGCGTCGTCT CACGTAAGAAGCAAATCGTGCCATTCTTAACGGAAGCGGCGACAAAATAA
Upstream 100 bases:
>100_bases AGCATAAGAGCCGACACGGCTCTTTTTGTTTGGGAATTGAAAGAAATGCCGTGGACGTTATAATGGATAAGGGAAAACTA TTTAGTGAGGAGAATGAGAC
Downstream 100 bases:
>100_bases AAACTCGAAGCCGTGGCCTCGAGCGAAACTGCAGACGTATGCTCGTCTGCAGTTTTAATTTTGATTGAGAAGAGTCTTTT TCAAATAGTATTGCTGATGA
Product: Inorganic diphosphatase
Products: NA
Alternate protein names: Pyrophosphate phospho-hydrolase; PPase
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MSTVLVFGHKNPDTDTITSALAYAELKKKLGMDAEAVRLGEVNGETQYALDHFRVKAPRLIESVKGEAEEVILVDHNEFQ QSADGIEDVRILEVIDHHRIANFQTADPLYYRAEPVGCTATILLKLYKEHGVEIAADMAGLMLSAIISDSLLFKSPTCTD EDIKAAKELAEIAGVDAETYGLEMLKAGADLSQKTIEELISLDAKEFAMGDYRVEIAQVNTVDANDVLNRKAEVEAAIAN TVAAKNLDLFVFAITNILTNDSEAIVVGPKPELFEQAFNVTLQNGLATLPGVVSRKKQIVPFLTEAATK
Sequences:
>Translated_309_residues MSTVLVFGHKNPDTDTITSALAYAELKKKLGMDAEAVRLGEVNGETQYALDHFRVKAPRLIESVKGEAEEVILVDHNEFQ QSADGIEDVRILEVIDHHRIANFQTADPLYYRAEPVGCTATILLKLYKEHGVEIAADMAGLMLSAIISDSLLFKSPTCTD EDIKAAKELAEIAGVDAETYGLEMLKAGADLSQKTIEELISLDAKEFAMGDYRVEIAQVNTVDANDVLNRKAEVEAAIAN TVAAKNLDLFVFAITNILTNDSEAIVVGPKPELFEQAFNVTLQNGLATLPGVVSRKKQIVPFLTEAATK >Mature_308_residues STVLVFGHKNPDTDTITSALAYAELKKKLGMDAEAVRLGEVNGETQYALDHFRVKAPRLIESVKGEAEEVILVDHNEFQQ SADGIEDVRILEVIDHHRIANFQTADPLYYRAEPVGCTATILLKLYKEHGVEIAADMAGLMLSAIISDSLLFKSPTCTDE DIKAAKELAEIAGVDAETYGLEMLKAGADLSQKTIEELISLDAKEFAMGDYRVEIAQVNTVDANDVLNRKAEVEAAIANT VAAKNLDLFVFAITNILTNDSEAIVVGPKPELFEQAFNVTLQNGLATLPGVVSRKKQIVPFLTEAATK
Specific function: Unknown
COG id: COG1227
COG function: function code C; Inorganic pyrophosphatase/exopolyphosphatase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PPase class C family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PPAC_EXISA (C4L0S9)
Other databases:
- EMBL: CP001615 - RefSeq: YP_002886337.1 - ProteinModelPortal: C4L0S9 - GeneID: 7869178 - GenomeReviews: CP001615_GR - KEGG: eat:EAT1b_1968 - OMA: CTTADIK - GO: GO:0005737 - HAMAP: MF_00207 - InterPro: IPR004097 - InterPro: IPR022934 - InterPro: IPR001667
Pfam domain/function: PF01368 DHH; PF02833 DHHA2
EC number: =3.6.1.1
Molecular weight: Translated: 33635; Mature: 33503
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTVLVFGHKNPDTDTITSALAYAELKKKLGMDAEAVRLGEVNGETQYALDHFRVKAPRL CCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHEEECCCCCCHHHHHHHHHCCHHHH IESVKGEAEEVILVDHNEFQQSADGIEDVRILEVIDHHRIANFQTADPLYYRAEPVGCTA HHHHCCCCCEEEEEECHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHH TILLKLYKEHGVEIAADMAGLMLSAIISDSLLFKSPTCTDEDIKAAKELAEIAGVDAETY HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHH GLEMLKAGADLSQKTIEELISLDAKEFAMGDYRVEIAQVNTVDANDVLNRKAEVEAAIAN HHHHHHCCCCCHHHHHHHHHCCCHHHHHCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHH TVAAKNLDLFVFAITNILTNDSEAIVVGPKPELFEQAFNVTLQNGLATLPGVVSRKKQIV HHHHCCCCCHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCCCHHCCHHHHHHHHHH PFLTEAATK HHHHHHCCC >Mature Secondary Structure STVLVFGHKNPDTDTITSALAYAELKKKLGMDAEAVRLGEVNGETQYALDHFRVKAPRL CEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHEEECCCCCCHHHHHHHHHCCHHHH IESVKGEAEEVILVDHNEFQQSADGIEDVRILEVIDHHRIANFQTADPLYYRAEPVGCTA HHHHCCCCCEEEEEECHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHH TILLKLYKEHGVEIAADMAGLMLSAIISDSLLFKSPTCTDEDIKAAKELAEIAGVDAETY HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHH GLEMLKAGADLSQKTIEELISLDAKEFAMGDYRVEIAQVNTVDANDVLNRKAEVEAAIAN HHHHHHCCCCCHHHHHHHHHCCCHHHHHCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHH TVAAKNLDLFVFAITNILTNDSEAIVVGPKPELFEQAFNVTLQNGLATLPGVVSRKKQIV HHHHCCCCCHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCCCHHCCHHHHHHHHHH PFLTEAATK HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA