| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is catE [H]
Identifier: 229917675
GI number: 229917675
Start: 1911756
End: 1912559
Strand: Direct
Name: catE [H]
Synonym: EAT1b_1952
Alternate gene names: 229917675
Gene position: 1911756-1912559 (Clockwise)
Preceding gene: 229917672
Following gene: 229917678
Centisome position: 63.73
GC content: 51.99
Gene sequence:
>804_bases ATGAAAATCGAGAAAATTGAACTCGGACCGGTGACGCTACGCGTCCGTGACATCGAACAGGTGACACGATTTTACGTAGA CGTGATTGGGATGAGCGTCTTAGAAGAGAGCGAAGAGCACATTACACTCGGTACGAAGGAACGTCCACTTGTCATCCTGC ACAGTGTCCCGCAAGCGAAGACGAATCCACGAGCGGCAGGATTGTTCCATTTAGCGATTTTATTTCCGAACCGAATAGAG TTAGGAAGCATGTTGGCGCATCTTATTGAGCGACGCGTCGAAGTGGGGCAAGGCGACCATCTTGTGAGTGAAGCCTTCTA CTTGAGTGACCCAGAAGGGAACGGGATTGAATTGTATGCCGACCGCCCGAAGGACCAATGGACGTACGAGGCAAACGGCC ATGTGAAAATGGCGACCGAGCCTGTCGACTATGAATCGATGCTTCAAGCGGCAGCCAATCGGCCGTTTACTGGTTTACCG ATTGGCACGACGATGGGGCACGTGCATTTTAAAGTACGCTCAATCGAGGCGGCGAAACGTTTTTACCATGATCGGCTGGG CTTCTCCATTACGACGGATTCTTATCCAGGGGCACTGTTCCTAGCGGCAGATGGCTATCACCATCATATCGGGACGAACG TGTGGGCCCGTCCGAGTGATCCGATGGGAATGGAGACCGGACTTGAGTCATGGACACTTCTCGTCAATGAAGACACGAAC CGAGCGTTAGGCGGAACGTCGTCTGAATGGACGTTGACTGATGAAGACGGGATTACCGTGCATATTAAAAGAACGGACGC TTGA
Upstream 100 bases:
>100_bases CTTCCTTTCCAATAGTATCGTTGAAGTAACTATACCACCTTTTTGTGCCTACTTCTGTAACATAAGCTGAGCGGGTATAG TGAAGGAGAGGTGATGATGT
Downstream 100 bases:
>100_bases TGGCGTCCGTTCTTTAACGTGCGGATGTTTTCTTCTGACTTGCGTTAAACGAGAGACGAAGTCCGCGTTTTTGATACGCT TGCTCGACTCGTTTTGGGTT
Product: Glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: Catechol-induced ring cleavage extradiol dioxygenase [H]
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MKIEKIELGPVTLRVRDIEQVTRFYVDVIGMSVLEESEEHITLGTKERPLVILHSVPQAKTNPRAAGLFHLAILFPNRIE LGSMLAHLIERRVEVGQGDHLVSEAFYLSDPEGNGIELYADRPKDQWTYEANGHVKMATEPVDYESMLQAAANRPFTGLP IGTTMGHVHFKVRSIEAAKRFYHDRLGFSITTDSYPGALFLAADGYHHHIGTNVWARPSDPMGMETGLESWTLLVNEDTN RALGGTSSEWTLTDEDGITVHIKRTDA
Sequences:
>Translated_267_residues MKIEKIELGPVTLRVRDIEQVTRFYVDVIGMSVLEESEEHITLGTKERPLVILHSVPQAKTNPRAAGLFHLAILFPNRIE LGSMLAHLIERRVEVGQGDHLVSEAFYLSDPEGNGIELYADRPKDQWTYEANGHVKMATEPVDYESMLQAAANRPFTGLP IGTTMGHVHFKVRSIEAAKRFYHDRLGFSITTDSYPGALFLAADGYHHHIGTNVWARPSDPMGMETGLESWTLLVNEDTN RALGGTSSEWTLTDEDGITVHIKRTDA >Mature_267_residues MKIEKIELGPVTLRVRDIEQVTRFYVDVIGMSVLEESEEHITLGTKERPLVILHSVPQAKTNPRAAGLFHLAILFPNRIE LGSMLAHLIERRVEVGQGDHLVSEAFYLSDPEGNGIELYADRPKDQWTYEANGHVKMATEPVDYESMLQAAANRPFTGLP IGTTMGHVHFKVRSIEAAKRFYHDRLGFSITTDSYPGALFLAADGYHHHIGTNVWARPSDPMGMETGLESWTLLVNEDTN RALGGTSSEWTLTDEDGITVHIKRTDA
Specific function: Involved in the meta cleavage of catechol to 2- hydroxymuconic semialdehyde. Essential for growth and viability in the presence of catechol and probably involved in the detoxification of catechol [H]
COG id: COG2514
COG function: function code R; Predicted ring-cleavage extradiol dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the extradiol ring-cleavage dioxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004360 - InterPro: IPR000486 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: =1.13.11.2 [H]
Molecular weight: Translated: 29833; Mature: 29833
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: PS00082 EXTRADIOL_DIOXYGENAS ; PS00934 GLYOXALASE_I_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIEKIELGPVTLRVRDIEQVTRFYVDVIGMSVLEESEEHITLGTKERPLVILHSVPQAK CCCEEEECCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEECCCCCC TNPRAAGLFHLAILFPNRIELGSMLAHLIERRVEVGQGDHLVSEAFYLSDPEGNGIELYA CCCCHHHEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEHHEEEEECCCCCCEEEEE DRPKDQWTYEANGHVKMATEPVDYESMLQAAANRPFTGLPIGTTMGHVHFKVRSIEAAKR CCCCCCEEEECCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEHHHHHHH FYHDRLGFSITTDSYPGALFLAADGYHHHIGTNVWARPSDPMGMETGLESWTLLVNEDTN HHHHHCCEEEECCCCCCEEEEEECCEEEECCCCEECCCCCCCCHHCCCCEEEEEEECCCC RALGGTSSEWTLTDEDGITVHIKRTDA CCCCCCCCCEEEECCCCEEEEEEECCC >Mature Secondary Structure MKIEKIELGPVTLRVRDIEQVTRFYVDVIGMSVLEESEEHITLGTKERPLVILHSVPQAK CCCEEEECCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEECCCCCC TNPRAAGLFHLAILFPNRIELGSMLAHLIERRVEVGQGDHLVSEAFYLSDPEGNGIELYA CCCCHHHEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEHHEEEEECCCCCCEEEEE DRPKDQWTYEANGHVKMATEPVDYESMLQAAANRPFTGLPIGTTMGHVHFKVRSIEAAKR CCCCCCEEEECCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEHHHHHHH FYHDRLGFSITTDSYPGALFLAADGYHHHIGTNVWARPSDPMGMETGLESWTLLVNEDTN HHHHHCCEEEECCCCCCEEEEEECCEEEECCCCEECCCCCCCCHHCCCCEEEEEEECCCC RALGGTSSEWTLTDEDGITVHIKRTDA CCCCCCCCCEEEECCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8704981; 9384377 [H]