| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229917644
Identifier: 229917644
GI number: 229917644
Start: 1881087
End: 1881524
Strand: Direct
Name: 229917644
Synonym: EAT1b_1921
Alternate gene names: NA
Gene position: 1881087-1881524 (Clockwise)
Preceding gene: 229917643
Following gene: 229917647
Centisome position: 62.71
GC content: 48.63
Gene sequence:
>438_bases ATGAAACGATTTAAAGCAGTCATTCCTGTCATCCTAGCGACGATTTGGTTAGGCGCGTGTCAACTTCAACCAGTAGAACG GACCATTGATCCGATTGGCATTCAACTGATCGTACCTGAACGTGTAGAAGTTGGCTCGACGACGCTTGCGATGAAAGTAT CGAATGATGAACGTGTGACGGAAAGCCATATTCAAGTCACACCTTACGATTCGGAAGAGACCCGGACGTATGAAGTGACA GAAAAGGATGGCTATCTCGTGACGAGCGTGAAGCTCGATCAGGGAATCTACCAAGTGAACGGCATGGTGCATGAAGGGCA AAAAGTGTATACGCCGGCCACGTGGATGATTGTCGGCGACGTACCACAAGATCAAATCGATCAATTGCAGCAACCGATCG TTCACTCACACGACCATGGTGGAGGACACCACCATTAA
Upstream 100 bases:
>100_bases TTCTCGGTGTGACATTACCGCTCGCAGGAATCAGTACTCTTGTCGTTCTCCTATTTGATTGGTTGATTGGTCGCCGGAAG TTGAAAGCGGAGGTGGCAGC
Downstream 100 bases:
>100_bases AAAAGTAACCGTTGCGTATGCAGCGGTTACTTTCGTTTAAGACGTATCCCGAGCTCTCCAATGAGAACGGCAATGCCCAT GAATCCGGCACCGAGAATGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MKRFKAVIPVILATIWLGACQLQPVERTIDPIGIQLIVPERVEVGSTTLAMKVSNDERVTESHIQVTPYDSEETRTYEVT EKDGYLVTSVKLDQGIYQVNGMVHEGQKVYTPATWMIVGDVPQDQIDQLQQPIVHSHDHGGGHHH
Sequences:
>Translated_145_residues MKRFKAVIPVILATIWLGACQLQPVERTIDPIGIQLIVPERVEVGSTTLAMKVSNDERVTESHIQVTPYDSEETRTYEVT EKDGYLVTSVKLDQGIYQVNGMVHEGQKVYTPATWMIVGDVPQDQIDQLQQPIVHSHDHGGGHHH >Mature_145_residues MKRFKAVIPVILATIWLGACQLQPVERTIDPIGIQLIVPERVEVGSTTLAMKVSNDERVTESHIQVTPYDSEETRTYEVT EKDGYLVTSVKLDQGIYQVNGMVHEGQKVYTPATWMIVGDVPQDQIDQLQQPIVHSHDHGGGHHH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16265; Mature: 16265
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRFKAVIPVILATIWLGACQLQPVERTIDPIGIQLIVPERVEVGSTTLAMKVSNDERVT CCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCC ESHIQVTPYDSEETRTYEVTEKDGYLVTSVKLDQGIYQVNGMVHEGQKVYTPATWMIVGD CCEEEECCCCCCCCEEEEEECCCCEEEEEEEECCCEEEECCEEECCCEEECCEEEEEEEC VPQDQIDQLQQPIVHSHDHGGGHHH CCHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MKRFKAVIPVILATIWLGACQLQPVERTIDPIGIQLIVPERVEVGSTTLAMKVSNDERVT CCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCC ESHIQVTPYDSEETRTYEVTEKDGYLVTSVKLDQGIYQVNGMVHEGQKVYTPATWMIVGD CCEEEECCCCCCCCEEEEEECCCCEEEEEEEECCCEEEECCEEECCCEEECCEEEEEEEC VPQDQIDQLQQPIVHSHDHGGGHHH CCHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA