The gene/protein map for NC_012673 is currently unavailable.
Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is ythP [H]

Identifier: 229917613

GI number: 229917613

Start: 1854743

End: 1855417

Strand: Direct

Name: ythP [H]

Synonym: EAT1b_1888

Alternate gene names: 229917613

Gene position: 1854743-1855417 (Clockwise)

Preceding gene: 229917612

Following gene: 229917614

Centisome position: 61.83

GC content: 48.44

Gene sequence:

>675_bases
GTGGATGTGAGAATTGAACAAGCAGGATATGAGAGTAACGAGCCCGTCATTCAAGACATTTCGTTTGATGTACGGGCAGG
TGAGATTTTAGGGGTGATTGGGTCGAATGGTGCAGGAAAAACGACCACCATCGCCTGTCTCACCGGAACGATTCCTTGGA
TGAAGGGAACGGTCGAGATGGAACGCTATGCGTACATCCCGGAGCAACCGGTCTACTATGATTATTTGACGCTGTCTGAA
CATATCGCACTCGTCCAAGAATTAACGGGAGTCGATTCAACAGAAAAAACGGAGGAGTTGCTACAGCTTTTCCGACTCGA
TCATGTGACCGATCGGTATCTCTCTTCTTTTTCAAAAGGGATGAAACAGAAGGCGATGATTTTATTGGCGCTCATTCAAG
AAACGCATGTATTAATTGTCGATGAACCGTTTATCGGATTGGATGCAACGACGACGATTCAGTTACTTCGACTGTTAGAA
ACGGAGCGTGCGAGGGGGGCAAGTGTCTTATTAGTCACACACGTTCTTGATACGGCCGAGCGGTTGTGTGACCGGTTCGT
ATGGATCGATGACGGGCAACTGCTGGCGAGTGGGACAAAAGCAGAGATTCGTGAGGCACTCGAAACAGAGGGGATGACCT
TGTTCGATATGATGGAAGATGTGGCGCTCCGATGA

Upstream 100 bases:

>100_bases
CGTTTGCCCGTCACCGATACGATAAATTTGTGTTTTCATCGGTCAATATTGTGAAGTGAAAGTCGCCGCGATGGCGACTT
TTTCGTAAGGAGGACCCATC

Downstream 100 bases:

>100_bases
TTGCGAAACGATTGTTTTGGATGCGTGTCTCCCGTTATTTAAAACAACAGTGGAAGACGGTCCGATTGATTGTCGACTGG
ACGATTTTTTTATACGGTGT

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MDVRIEQAGYESNEPVIQDISFDVRAGEILGVIGSNGAGKTTTIACLTGTIPWMKGTVEMERYAYIPEQPVYYDYLTLSE
HIALVQELTGVDSTEKTEELLQLFRLDHVTDRYLSSFSKGMKQKAMILLALIQETHVLIVDEPFIGLDATTTIQLLRLLE
TERARGASVLLVTHVLDTAERLCDRFVWIDDGQLLASGTKAEIREALETEGMTLFDMMEDVALR

Sequences:

>Translated_224_residues
MDVRIEQAGYESNEPVIQDISFDVRAGEILGVIGSNGAGKTTTIACLTGTIPWMKGTVEMERYAYIPEQPVYYDYLTLSE
HIALVQELTGVDSTEKTEELLQLFRLDHVTDRYLSSFSKGMKQKAMILLALIQETHVLIVDEPFIGLDATTTIQLLRLLE
TERARGASVLLVTHVLDTAERLCDRFVWIDDGQLLASGTKAEIREALETEGMTLFDMMEDVALR
>Mature_224_residues
MDVRIEQAGYESNEPVIQDISFDVRAGEILGVIGSNGAGKTTTIACLTGTIPWMKGTVEMERYAYIPEQPVYYDYLTLSE
HIALVQELTGVDSTEKTEELLQLFRLDHVTDRYLSSFSKGMKQKAMILLALIQETHVLIVDEPFIGLDATTTIQLLRLLE
TERARGASVLLVTHVLDTAERLCDRFVWIDDGQLLASGTKAEIREALETEGMTLFDMMEDVALR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI116734710, Length=205, Percent_Identity=29.7560975609756, Blast_Score=102, Evalue=4e-22,
Organism=Homo sapiens, GI27436953, Length=205, Percent_Identity=32.6829268292683, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI153792144, Length=210, Percent_Identity=27.6190476190476, Blast_Score=99, Evalue=3e-21,
Organism=Homo sapiens, GI30795238, Length=205, Percent_Identity=29.7560975609756, Blast_Score=95, Evalue=4e-20,
Organism=Homo sapiens, GI27881501, Length=205, Percent_Identity=29.7560975609756, Blast_Score=95, Evalue=4e-20,
Organism=Homo sapiens, GI105990541, Length=224, Percent_Identity=28.125, Blast_Score=93, Evalue=1e-19,
Organism=Homo sapiens, GI31657092, Length=216, Percent_Identity=30.5555555555556, Blast_Score=93, Evalue=2e-19,
Organism=Homo sapiens, GI150417984, Length=215, Percent_Identity=30.6976744186047, Blast_Score=91, Evalue=9e-19,
Organism=Homo sapiens, GI6005701, Length=208, Percent_Identity=28.3653846153846, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI21536376, Length=210, Percent_Identity=30.4761904761905, Blast_Score=89, Evalue=2e-18,
Organism=Homo sapiens, GI27262624, Length=207, Percent_Identity=29.4685990338164, Blast_Score=88, Evalue=6e-18,
Organism=Homo sapiens, GI27262626, Length=207, Percent_Identity=29.4685990338164, Blast_Score=88, Evalue=6e-18,
Organism=Homo sapiens, GI27477115, Length=225, Percent_Identity=27.1111111111111, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI45446740, Length=200, Percent_Identity=26, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI47078218, Length=200, Percent_Identity=26, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI89111135, Length=204, Percent_Identity=28.4313725490196, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI11967969, Length=223, Percent_Identity=27.3542600896861, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI157502201, Length=201, Percent_Identity=26.865671641791, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI157502203, Length=204, Percent_Identity=26.4705882352941, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI21729873, Length=200, Percent_Identity=24.5, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI15149474, Length=200, Percent_Identity=24.5, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI21729876, Length=200, Percent_Identity=24.5, Blast_Score=66, Evalue=3e-11,
Organism=Escherichia coli, GI1789593, Length=207, Percent_Identity=28.5024154589372, Blast_Score=104, Evalue=5e-24,
Organism=Escherichia coli, GI1790739, Length=209, Percent_Identity=28.7081339712919, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI48994943, Length=206, Percent_Identity=30.0970873786408, Blast_Score=97, Evalue=6e-22,
Organism=Escherichia coli, GI1786345, Length=210, Percent_Identity=29.0476190476191, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI1786398, Length=211, Percent_Identity=33.175355450237, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI87081782, Length=201, Percent_Identity=27.363184079602, Blast_Score=88, Evalue=4e-19,
Organism=Escherichia coli, GI48995001, Length=223, Percent_Identity=27.8026905829596, Blast_Score=84, Evalue=8e-18,
Organism=Escherichia coli, GI1786563, Length=195, Percent_Identity=27.1794871794872, Blast_Score=84, Evalue=9e-18,
Organism=Escherichia coli, GI1787759, Length=230, Percent_Identity=26.9565217391304, Blast_Score=84, Evalue=9e-18,
Organism=Escherichia coli, GI48994883, Length=233, Percent_Identity=24.8927038626609, Blast_Score=82, Evalue=2e-17,
Organism=Escherichia coli, GI1786319, Length=221, Percent_Identity=25.7918552036199, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1787792, Length=207, Percent_Identity=26.5700483091787, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1788761, Length=200, Percent_Identity=27, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1790190, Length=216, Percent_Identity=25.462962962963, Blast_Score=76, Evalue=1e-15,
Organism=Escherichia coli, GI1787105, Length=215, Percent_Identity=25.1162790697674, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1790467, Length=204, Percent_Identity=25.9803921568627, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI87081834, Length=203, Percent_Identity=29.064039408867, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1788450, Length=205, Percent_Identity=24.8780487804878, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1787089, Length=204, Percent_Identity=26.4705882352941, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI87082268, Length=200, Percent_Identity=27, Blast_Score=74, Evalue=6e-15,
Organism=Escherichia coli, GI1789032, Length=209, Percent_Identity=24.4019138755981, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI1787370, Length=206, Percent_Identity=25.7281553398058, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI1786803, Length=215, Percent_Identity=26.046511627907, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1789891, Length=212, Percent_Identity=25.4716981132075, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788165, Length=209, Percent_Identity=26.7942583732057, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI145693107, Length=228, Percent_Identity=24.1228070175439, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1790525, Length=227, Percent_Identity=25.9911894273128, Blast_Score=68, Evalue=4e-13,
Organism=Escherichia coli, GI1787029, Length=204, Percent_Identity=23.0392156862745, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1786253, Length=200, Percent_Identity=24, Blast_Score=67, Evalue=8e-13,
Organism=Escherichia coli, GI1787712, Length=194, Percent_Identity=25.2577319587629, Blast_Score=67, Evalue=8e-13,
Organism=Escherichia coli, GI1787112, Length=215, Percent_Identity=28.8372093023256, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI87082267, Length=212, Percent_Identity=25, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI87081709, Length=216, Percent_Identity=21.7592592592593, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI1789672, Length=222, Percent_Identity=22.5225225225225, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1787772, Length=181, Percent_Identity=30.3867403314917, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1787758, Length=200, Percent_Identity=26.5, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1786975, Length=209, Percent_Identity=25.3588516746411, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1788225, Length=209, Percent_Identity=23.444976076555, Blast_Score=60, Evalue=8e-11,
Organism=Escherichia coli, GI1787500, Length=213, Percent_Identity=26.2910798122066, Blast_Score=60, Evalue=1e-10,
Organism=Caenorhabditis elegans, GI71983510, Length=214, Percent_Identity=31.3084112149533, Blast_Score=101, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI71983523, Length=214, Percent_Identity=31.3084112149533, Blast_Score=101, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI71983516, Length=214, Percent_Identity=31.3084112149533, Blast_Score=101, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17510237, Length=213, Percent_Identity=29.5774647887324, Blast_Score=95, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI115533608, Length=237, Percent_Identity=27.0042194092827, Blast_Score=92, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17565586, Length=211, Percent_Identity=25.1184834123223, Blast_Score=79, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17511077, Length=221, Percent_Identity=25.7918552036199, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI193202878, Length=179, Percent_Identity=27.9329608938547, Blast_Score=64, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24643674, Length=209, Percent_Identity=32.0574162679426, Blast_Score=104, Evalue=6e-23,
Organism=Drosophila melanogaster, GI24666092, Length=200, Percent_Identity=35.5, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI221512771, Length=221, Percent_Identity=28.5067873303167, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24648314, Length=206, Percent_Identity=28.1553398058252, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI28574150, Length=200, Percent_Identity=27, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI116007328, Length=200, Percent_Identity=27, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI116007184, Length=199, Percent_Identity=25.6281407035176, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI221500365, Length=199, Percent_Identity=25.6281407035176, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI85725262, Length=235, Percent_Identity=24.2553191489362, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI28573571, Length=205, Percent_Identity=22.4390243902439, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI28573573, Length=205, Percent_Identity=22.4390243902439, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI28571209, Length=206, Percent_Identity=26.2135922330097, Blast_Score=71, Evalue=5e-13,
Organism=Drosophila melanogaster, GI85816269, Length=230, Percent_Identity=26.9565217391304, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24580553, Length=230, Percent_Identity=26.9565217391304, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI85724864, Length=230, Percent_Identity=26.9565217391304, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24580555, Length=230, Percent_Identity=26.9565217391304, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24650853, Length=188, Percent_Identity=26.5957446808511, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24581191, Length=196, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24581189, Length=196, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24581193, Length=196, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24581195, Length=196, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI281362751, Length=203, Percent_Identity=27.0935960591133, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24650855, Length=188, Percent_Identity=26.5957446808511, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI161077321, Length=206, Percent_Identity=25.7281553398058, Blast_Score=66, Evalue=1e-11,
Organism=Drosophila melanogaster, GI161076682, Length=201, Percent_Identity=27.8606965174129, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI161076684, Length=201, Percent_Identity=27.8606965174129, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24581617, Length=201, Percent_Identity=27.8606965174129, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24581615, Length=201, Percent_Identity=27.8606965174129, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24582014, Length=223, Percent_Identity=25.5605381165919, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24582012, Length=223, Percent_Identity=25.5605381165919, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: 120 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 25091; Mature: 25091

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MDVRIEQAGYESNEPVIQDISFDVRAGEILGVIGSNGAGKTTTIACLTGTIPWMKGTVEM
CCEEECCCCCCCCCCEEECCCCCEECCEEEEEEECCCCCCEEEEEEEECCCCHHCCCEEH
ERYAYIPEQPVYYDYLTLSEHIALVQELTGVDSTEKTEELLQLFRLDHVTDRYLSSFSKG
HHEECCCCCCCEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
MKQKAMILLALIQETHVLIVDEPFIGLDATTTIQLLRLLETERARGASVLLVTHVLDTAE
HHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHH
RLCDRFVWIDDGQLLASGTKAEIREALETEGMTLFDMMEDVALR
HHHHHEEEECCCCEEECCCHHHHHHHHHHCCCHHHHHHHHHHCC
>Mature Secondary Structure
MDVRIEQAGYESNEPVIQDISFDVRAGEILGVIGSNGAGKTTTIACLTGTIPWMKGTVEM
CCEEECCCCCCCCCCEEECCCCCEECCEEEEEEECCCCCCEEEEEEEECCCCHHCCCEEH
ERYAYIPEQPVYYDYLTLSEHIALVQELTGVDSTEKTEELLQLFRLDHVTDRYLSSFSKG
HHEECCCCCCCEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
MKQKAMILLALIQETHVLIVDEPFIGLDATTTIQLLRLLETERARGASVLLVTHVLDTAE
HHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHH
RLCDRFVWIDDGQLLASGTKAEIREALETEGMTLFDMMEDVALR
HHHHHEEEECCCCEEECCCHHHHHHHHHHCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]