| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
Click here to switch to the map view.
The map label for this gene is htpX [H]
Identifier: 229917592
GI number: 229917592
Start: 1833509
End: 1834393
Strand: Direct
Name: htpX [H]
Synonym: EAT1b_1867
Alternate gene names: 229917592
Gene position: 1833509-1834393 (Clockwise)
Preceding gene: 229917591
Following gene: 229917593
Centisome position: 61.12
GC content: 51.98
Gene sequence:
>885_bases ATGCTCCTCTATGAACAGATTCGAAAGAATAAAGTGAAGACGGTCTTCATCGTCACAGGGTTTGTCCTATTCGTCCTTCT CGTTGGGGCGGCGATTTCCTACGTCACCTACGGGGACGCAGTTCCAGGGTTAATTTTCACACCTATTTTCTCGTTGTTTT ATGTCGGTATCGTCATCATGTCGAGCACGAACATCGTCATGAAGATGAATCGGGCGCAAGAAGTGACATCGGTGGAAGAA CACCGCTTTTTATGGCATACGGTCGAAAACATGGCGATGGTCGCGCGAGTGCCGATGCCGCGCATCTTTATCATCAACGA CCCATCGCCGAACGCATTTGCGACGGGGTTGAAGCCAGAAAAGGCGGCTGTCGCCGTCACGACGGGACTGTTGGATCGAT TATCGCGAGAAGAAATAGAAGGGGTGATTGCGCACGAGGTCGCGCATATTAAAAATTATGATGTCCGACTCTCGACGGTC ACGCTCGCACTCGTTTCAGTCATCGCTATCATGAGCGATATCGGGTCGCGCATGCTGTTCTTCAGAAGTATCGGTGGAAG ACGCGATCAAAACCAGAATCCAATTTTCATGATCATCGGACTCGTCCTGTTGGTATTGGCACCGCTCATCGCCATGCTCA TCAATATGGCGATTTCCCGGAATCGCGAGTTTCTGGCAGATGCGAGTGGGGCGGAACTGACCCGAAACCCAGATGCGCTC GCCTCGGCGCTTGAGAAGATTGCCAACGTCGAGACACCCGTCGAGCAAGCGTCGAGTGCCTCGGCACCGCTTTACTTCTC CGATCCACTTAAGAAGAAGGTGAGTGGTCTATTCTCGACACATCCCGATCCAGTCGAACGCATTTCCCGACTTCGTCAAA TGTAG
Upstream 100 bases:
>100_bases CGCTTCCGTCCATCATTTCGAAAAGCGCGATATGCTCGAGGCACGTGCCGAAGAGCGCGAGAACGTTCGCGTTTCGTTTT GATGAATCGAGGTGGCGCGT
Downstream 100 bases:
>100_bases TCAGAGCCTGTCCGGTTGCGGCAGGCTCTTTATGTTACACTGAACTGGGAAAATAAGGGGGTGGATGAGTTGAATAAAAA GATATACATAGGTTTAGGCG
Product: heat shock protein HtpX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MLLYEQIRKNKVKTVFIVTGFVLFVLLVGAAISYVTYGDAVPGLIFTPIFSLFYVGIVIMSSTNIVMKMNRAQEVTSVEE HRFLWHTVENMAMVARVPMPRIFIINDPSPNAFATGLKPEKAAVAVTTGLLDRLSREEIEGVIAHEVAHIKNYDVRLSTV TLALVSVIAIMSDIGSRMLFFRSIGGRRDQNQNPIFMIIGLVLLVLAPLIAMLINMAISRNREFLADASGAELTRNPDAL ASALEKIANVETPVEQASSASAPLYFSDPLKKKVSGLFSTHPDPVERISRLRQM
Sequences:
>Translated_294_residues MLLYEQIRKNKVKTVFIVTGFVLFVLLVGAAISYVTYGDAVPGLIFTPIFSLFYVGIVIMSSTNIVMKMNRAQEVTSVEE HRFLWHTVENMAMVARVPMPRIFIINDPSPNAFATGLKPEKAAVAVTTGLLDRLSREEIEGVIAHEVAHIKNYDVRLSTV TLALVSVIAIMSDIGSRMLFFRSIGGRRDQNQNPIFMIIGLVLLVLAPLIAMLINMAISRNREFLADASGAELTRNPDAL ASALEKIANVETPVEQASSASAPLYFSDPLKKKVSGLFSTHPDPVERISRLRQM >Mature_294_residues MLLYEQIRKNKVKTVFIVTGFVLFVLLVGAAISYVTYGDAVPGLIFTPIFSLFYVGIVIMSSTNIVMKMNRAQEVTSVEE HRFLWHTVENMAMVARVPMPRIFIINDPSPNAFATGLKPEKAAVAVTTGLLDRLSREEIEGVIAHEVAHIKNYDVRLSTV TLALVSVIAIMSDIGSRMLFFRSIGGRRDQNQNPIFMIIGLVLLVLAPLIAMLINMAISRNREFLADASGAELTRNPDAL ASALEKIANVETPVEQASSASAPLYFSDPLKKKVSGLFSTHPDPVERISRLRQM
Specific function: Unknown Function. Overexpression Of A Truncated Form Of The Htpx Protein Leads To An Increase In The Degradation Of Abnormal Proteins. [C]
COG id: COG0501
COG function: function code O; Zn-dependent protease with chaperone function
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M48B family [H]
Homologues:
Organism=Escherichia coli, GI1788133, Length=219, Percent_Identity=36.5296803652968, Blast_Score=114, Evalue=7e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022919 - InterPro: IPR001915 [H]
Pfam domain/function: PF01435 Peptidase_M48 [H]
EC number: 3.4.24.- [C]
Molecular weight: Translated: 32462; Mature: 32462
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLYEQIRKNKVKTVFIVTGFVLFVLLVGAAISYVTYGDAVPGLIFTPIFSLFYVGIVIM CCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH SSTNIVMKMNRAQEVTSVEEHRFLWHTVENMAMVARVPMPRIFIINDPSPNAFATGLKPE CCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEECCCCCC KAAVAVTTGLLDRLSREEIEGVIAHEVAHIKNYDVRLSTVTLALVSVIAIMSDIGSRMLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FRSIGGRRDQNQNPIFMIIGLVLLVLAPLIAMLINMAISRNREFLADASGAELTRNPDAL HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHH ASALEKIANVETPVEQASSASAPLYFSDPLKKKVSGLFSTHPDPVERISRLRQM HHHHHHHHCCCCCHHHHCCCCCCEEECCHHHHHHHHHHCCCCCHHHHHHHHHCC >Mature Secondary Structure MLLYEQIRKNKVKTVFIVTGFVLFVLLVGAAISYVTYGDAVPGLIFTPIFSLFYVGIVIM CCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH SSTNIVMKMNRAQEVTSVEEHRFLWHTVENMAMVARVPMPRIFIINDPSPNAFATGLKPE CCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEECCCCCC KAAVAVTTGLLDRLSREEIEGVIAHEVAHIKNYDVRLSTVTLALVSVIAIMSDIGSRMLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FRSIGGRRDQNQNPIFMIIGLVLLVLAPLIAMLINMAISRNREFLADASGAELTRNPDAL HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHH ASALEKIANVETPVEQASSASAPLYFSDPLKKKVSGLFSTHPDPVERISRLRQM HHHHHHHHCCCCCHHHHCCCCCCEEECCHHHHHHHHHHCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Zn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA