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The map label for this gene is ytfL [C]

Identifier: 229917588

GI number: 229917588

Start: 1829847

End: 1831166

Strand: Direct

Name: ytfL [C]

Synonym: EAT1b_1863

Alternate gene names: 229917588

Gene position: 1829847-1831166 (Clockwise)

Preceding gene: 229917587

Following gene: 229917591

Centisome position: 61.0

GC content: 47.35

Gene sequence:

>1320_bases
GTGGATTCTTCCATAGTGATTGATTTGTTGATTGTTTTGTTTTTGATTGTGTTGAACGGGATTTTTGCGATGACAGAAAT
TGCGCTCATCTCATCGAAACCTGCAAAACTTGAGGTTGAAGCAAATCGAGGGAAACGAAGTGCCAAGATTGCGCTTCATT
ATTCGAAAGACCCGACAGATTTGTTGTCGACCGTTCAAGTCGGAATCACATTGATTGGGATTATTAACGGGGCCTACGGG
GGCGCACGCTTCTCGGCACCGCTCGCATCGGCGTTTGAACAAGCCGGGATGAGTACGCAGTATGCCGGAACCGTTGCTTA
TGTAGCCGTCGTTACAATTATCACGTATCTATCCCTGATTATCGGTGAATTGGTCCCGAAACGGATCGCGCTCGTCTCGC
CTGAGAAAGTCACGATGGCGATTATTCCTTCGCTCGATCTATTCAGCAAGGTGATGAAACCGTTCATTTGGATTTTATCG
AAGTCAACACTCTTCTTGTTCAAACTCCTTGGATTGAAGGCGGAACAGACGAGTGGGGAGACCGAACTTGAGATCAAACA
ACTTTTGTTTGAGGGCGCTCAACAAGGACAGTTCGCTCATGAAGAAGTTCGACAAGTCGAACGGGTCTTTGCGTTTCATG
ATCAATTGATTTATGAGCTCATGCAGCCACGGACGACGCTCGAATGGGTCGACTTAGAAGATGACATGGACGATATGAAG
AAATCGATTTATGAAAGTAAACATAACAAGTTACCGGTCGGGCGCGACTCGCTTGACGACTTTGTCGGGTACATCGACGT
ACGTGACATCTTGACGTTGCCGACACTGCGTGAGCCGTCACAAATTTTGAAGCGCATCAAACAGCCGCTCATCGTTCCAA
AACAACGAGAGGCGAGCCAAGTGCTTCAAATGATGCAGAAAAATGGTGTCGAAATCGCCTTTGTTTTAGATGAATACGGC
GGATTCCTTGGCATGGTCACCCTGTTCGATATTTTGGAAGAAATCGTCGGAGAGGTGATGATTGAAGAGGATACACCGGA
AGTGGTACGTCGTGAAGATGGATCATATTTGGCGGATGGGTTACTCGGAATCGAGGATTTGAAGCGAACGTTCGAGATTC
GGGATGACCGATTCGACGAAGGGCGCAACTCCTATCATACGCTCGCAGGACTCGTCATTTATGCACTCGGTGATTTTCCG
AAACGGGGCGATGTGGTCGAAGCGTACGGTCTTCGCTTTGAAGTCGTAGATATGGACGGAAAGCGTGTCGACCAAGTGCT
TGTTTCAGAATTAAAAGAACCAATTACAGAAGAGGACTGA

Upstream 100 bases:

>100_bases
AGGAGTGGCTATTTTTCTGAGCAAAACGGGTACAGGTTGGTAACGATTTTTTGATAAAATGAAGCAGTATGGTTAAAAAT
TAGCTGAGGTGATGAAAAAA

Downstream 100 bases:

>100_bases
TGCGATGCATCAGCCCTCTTTTTCGTGTGTCATCCACGTTCGTTGTAAAGCCCCTAACAAGACTTGGGCTGTGTGCAACA
TCGCTCGTTCATCCACGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 439; Mature: 439

Protein sequence:

>439_residues
MDSSIVIDLLIVLFLIVLNGIFAMTEIALISSKPAKLEVEANRGKRSAKIALHYSKDPTDLLSTVQVGITLIGIINGAYG
GARFSAPLASAFEQAGMSTQYAGTVAYVAVVTIITYLSLIIGELVPKRIALVSPEKVTMAIIPSLDLFSKVMKPFIWILS
KSTLFLFKLLGLKAEQTSGETELEIKQLLFEGAQQGQFAHEEVRQVERVFAFHDQLIYELMQPRTTLEWVDLEDDMDDMK
KSIYESKHNKLPVGRDSLDDFVGYIDVRDILTLPTLREPSQILKRIKQPLIVPKQREASQVLQMMQKNGVEIAFVLDEYG
GFLGMVTLFDILEEIVGEVMIEEDTPEVVRREDGSYLADGLLGIEDLKRTFEIRDDRFDEGRNSYHTLAGLVIYALGDFP
KRGDVVEAYGLRFEVVDMDGKRVDQVLVSELKEPITEED

Sequences:

>Translated_439_residues
MDSSIVIDLLIVLFLIVLNGIFAMTEIALISSKPAKLEVEANRGKRSAKIALHYSKDPTDLLSTVQVGITLIGIINGAYG
GARFSAPLASAFEQAGMSTQYAGTVAYVAVVTIITYLSLIIGELVPKRIALVSPEKVTMAIIPSLDLFSKVMKPFIWILS
KSTLFLFKLLGLKAEQTSGETELEIKQLLFEGAQQGQFAHEEVRQVERVFAFHDQLIYELMQPRTTLEWVDLEDDMDDMK
KSIYESKHNKLPVGRDSLDDFVGYIDVRDILTLPTLREPSQILKRIKQPLIVPKQREASQVLQMMQKNGVEIAFVLDEYG
GFLGMVTLFDILEEIVGEVMIEEDTPEVVRREDGSYLADGLLGIEDLKRTFEIRDDRFDEGRNSYHTLAGLVIYALGDFP
KRGDVVEAYGLRFEVVDMDGKRVDQVLVSELKEPITEED
>Mature_439_residues
MDSSIVIDLLIVLFLIVLNGIFAMTEIALISSKPAKLEVEANRGKRSAKIALHYSKDPTDLLSTVQVGITLIGIINGAYG
GARFSAPLASAFEQAGMSTQYAGTVAYVAVVTIITYLSLIIGELVPKRIALVSPEKVTMAIIPSLDLFSKVMKPFIWILS
KSTLFLFKLLGLKAEQTSGETELEIKQLLFEGAQQGQFAHEEVRQVERVFAFHDQLIYELMQPRTTLEWVDLEDDMDDMK
KSIYESKHNKLPVGRDSLDDFVGYIDVRDILTLPTLREPSQILKRIKQPLIVPKQREASQVLQMMQKNGVEIAFVLDEYG
GFLGMVTLFDILEEIVGEVMIEEDTPEVVRREDGSYLADGLLGIEDLKRTFEIRDDRFDEGRNSYHTLAGLVIYALGDFP
KRGDVVEAYGLRFEVVDMDGKRVDQVLVSELKEPITEED

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=361, Percent_Identity=29.6398891966759, Blast_Score=171, Evalue=9e-43,
Organism=Escherichia coli, GI1790664, Length=431, Percent_Identity=29.4663573085847, Blast_Score=225, Evalue=6e-60,
Organism=Escherichia coli, GI145693175, Length=432, Percent_Identity=26.3888888888889, Blast_Score=136, Evalue=3e-33,
Organism=Escherichia coli, GI87082033, Length=267, Percent_Identity=27.7153558052434, Blast_Score=109, Evalue=4e-25,
Organism=Escherichia coli, GI1788119, Length=247, Percent_Identity=27.9352226720648, Blast_Score=101, Evalue=1e-22,
Organism=Escherichia coli, GI1786879, Length=249, Percent_Identity=28.9156626506024, Blast_Score=89, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 49233; Mature: 49233

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSSIVIDLLIVLFLIVLNGIFAMTEIALISSKPAKLEVEANRGKRSAKIALHYSKDPTD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEECCCHHH
LLSTVQVGITLIGIINGAYGGARFSAPLASAFEQAGMSTQYAGTVAYVAVVTIITYLSLI
HHHHHHHHHHHHHHHHCCCCCCHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
IGELVPKRIALVSPEKVTMAIIPSLDLFSKVMKPFIWILSKSTLFLFKLLGLKAEQTSGE
HHHHHHHHHEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
TELEIKQLLFEGAQQGQFAHEEVRQVERVFAFHDQLIYELMQPRTTLEWVDLEDDMDDMK
HHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHH
KSIYESKHNKLPVGRDSLDDFVGYIDVRDILTLPTLREPSQILKRIKQPLIVPKQREASQ
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHH
VLQMMQKNGVEIAFVLDEYGGFLGMVTLFDILEEIVGEVMIEEDTPEVVRREDGSYLADG
HHHHHHHCCCEEEEEEHHHCCHHHHHHHHHHHHHHHHHHEECCCCHHHHHHCCCCHHHHH
LLGIEDLKRTFEIRDDRFDEGRNSYHTLAGLVIYALGDFPKRGDVVEAYGLRFEVVDMDG
HHCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEECCCC
KRVDQVLVSELKEPITEED
HHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDSSIVIDLLIVLFLIVLNGIFAMTEIALISSKPAKLEVEANRGKRSAKIALHYSKDPTD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEECCCHHH
LLSTVQVGITLIGIINGAYGGARFSAPLASAFEQAGMSTQYAGTVAYVAVVTIITYLSLI
HHHHHHHHHHHHHHHHCCCCCCHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
IGELVPKRIALVSPEKVTMAIIPSLDLFSKVMKPFIWILSKSTLFLFKLLGLKAEQTSGE
HHHHHHHHHEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
TELEIKQLLFEGAQQGQFAHEEVRQVERVFAFHDQLIYELMQPRTTLEWVDLEDDMDDMK
HHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHH
KSIYESKHNKLPVGRDSLDDFVGYIDVRDILTLPTLREPSQILKRIKQPLIVPKQREASQ
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHH
VLQMMQKNGVEIAFVLDEYGGFLGMVTLFDILEEIVGEVMIEEDTPEVVRREDGSYLADG
HHHHHHHCCCEEEEEEHHHCCHHHHHHHHHHHHHHHHHHEECCCCHHHHHHCCCCHHHHH
LLGIEDLKRTFEIRDDRFDEGRNSYHTLAGLVIYALGDFPKRGDVVEAYGLRFEVVDMDG
HHCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEECCCC
KRVDQVLVSELKEPITEED
HHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]