| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229917566
Identifier: 229917566
GI number: 229917566
Start: 1812407
End: 1813525
Strand: Direct
Name: 229917566
Synonym: EAT1b_1841
Alternate gene names: NA
Gene position: 1812407-1813525 (Clockwise)
Preceding gene: 229917563
Following gene: 229917567
Centisome position: 60.42
GC content: 48.79
Gene sequence:
>1119_bases ATGGATCGGACAGGGCTCGTCTCAAATATTTTGATTGCTGGAAAGACCGGTGTCGGAAAGAGTGCGTTCATCAACTATAT ATATGGACATGACGTCGCCGAATCGCGTGCCGGAAGTCCGGTCACTCAAGAAGGGCTTCACGAATACGAGTATTACGATT TAGAACGGGGCATCTTGTTTCGTTTTTTCGATACGTGGGGGCTCGAGGCGGACCGCTCTGAAGAGTGGCACCAAGCAATC CTATCCATCGTCCATCAGCGTGAAGGCGCGCTCGATATCGCAGAGTGGTTTCATACGATTTACTACTTATTGTCGGTGCA GTCAGGACGTGTCGAGGCGTATGAGCTCGAGGCGATTTTAAAGCCATTATATGAGCGGGGGAGCAACGTCACTCTCATTC TGACTAACTTCAATGAAGACGACCCGATGAGTGTACAAAAGGCAGAGGCGATGGAACGGGTATTGTTACGCGAACTGCCG ATTGAAGAAGAGGACATCATCCGTGTCAACAGTGTCGAAAAGAAATTACTCACAGGGAAACGCGTCCCGGTAAAAGGGTA TGAAGAGGTATGGAAGCGGAATCGGACGAACCTGTGGAAAGACATCGAACGAAAACTCCCCATCAATCTGACGAATCATC TCCTAGACGAGTTAGAGGATTGGCGAATTCGGAGTATCGCTTCGGCAGAGGCGATTCGGATGCTGACCCCGCAAGCAATG ATCAGTTGGAAAGCTAGAAAAATAGAGAAAGATTTAGAAAAGACGCTTGAAGAGGCCGCTTTGACGACGGAAGAGGCGAT GGCAGAAGGGGTGCGTCATTATATCCAACTCATGCAGCGGTACCCACTCGTCGGAGAACAAGCAGACCTGTTGTTTAGAA CGAGACGAGTTGAGCTCGGATTTGACTATTCGTTCGGAAAAACAGTTCGAAAGATGGTTCTTGGAATGATTCCTGGGGTG CATTTCATCTATTGGGCATTCAAGCGTCGAACGGCAGAACGGGGAATCAAAAAAGCGATTGAACAGCAATACGCATCCGT AAGACAAACAATTGAAGAAGAGATTCGACGCGGCTTTGAACGTGAGATGCGTCAGCTTGGTCGCACGCTCAACTCATAA
Upstream 100 bases:
>100_bases AGTTCGACATGGTGAAGCATGAGAATCATCCTTTCGATGGACGTTTGAAAATGGTCCGTTCGGTATAATTGAACTATACA ACGAATGAGGGAGGAAGCGT
Downstream 100 bases:
>100_bases GGGGGAAACGTAAATGGAATCGACGAAACGATTTGATTTTAAGGATTATGATGTAAAGGCAGAGCTCGAACGGCTACGGG GCAATGTCAAAAAACCAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MDRTGLVSNILIAGKTGVGKSAFINYIYGHDVAESRAGSPVTQEGLHEYEYYDLERGILFRFFDTWGLEADRSEEWHQAI LSIVHQREGALDIAEWFHTIYYLLSVQSGRVEAYELEAILKPLYERGSNVTLILTNFNEDDPMSVQKAEAMERVLLRELP IEEEDIIRVNSVEKKLLTGKRVPVKGYEEVWKRNRTNLWKDIERKLPINLTNHLLDELEDWRIRSIASAEAIRMLTPQAM ISWKARKIEKDLEKTLEEAALTTEEAMAEGVRHYIQLMQRYPLVGEQADLLFRTRRVELGFDYSFGKTVRKMVLGMIPGV HFIYWAFKRRTAERGIKKAIEQQYASVRQTIEEEIRRGFEREMRQLGRTLNS
Sequences:
>Translated_372_residues MDRTGLVSNILIAGKTGVGKSAFINYIYGHDVAESRAGSPVTQEGLHEYEYYDLERGILFRFFDTWGLEADRSEEWHQAI LSIVHQREGALDIAEWFHTIYYLLSVQSGRVEAYELEAILKPLYERGSNVTLILTNFNEDDPMSVQKAEAMERVLLRELP IEEEDIIRVNSVEKKLLTGKRVPVKGYEEVWKRNRTNLWKDIERKLPINLTNHLLDELEDWRIRSIASAEAIRMLTPQAM ISWKARKIEKDLEKTLEEAALTTEEAMAEGVRHYIQLMQRYPLVGEQADLLFRTRRVELGFDYSFGKTVRKMVLGMIPGV HFIYWAFKRRTAERGIKKAIEQQYASVRQTIEEEIRRGFEREMRQLGRTLNS >Mature_372_residues MDRTGLVSNILIAGKTGVGKSAFINYIYGHDVAESRAGSPVTQEGLHEYEYYDLERGILFRFFDTWGLEADRSEEWHQAI LSIVHQREGALDIAEWFHTIYYLLSVQSGRVEAYELEAILKPLYERGSNVTLILTNFNEDDPMSVQKAEAMERVLLRELP IEEEDIIRVNSVEKKLLTGKRVPVKGYEEVWKRNRTNLWKDIERKLPINLTNHLLDELEDWRIRSIASAEAIRMLTPQAM ISWKARKIEKDLEKTLEEAALTTEEAMAEGVRHYIQLMQRYPLVGEQADLLFRTRRVELGFDYSFGKTVRKMVLGMIPGV HFIYWAFKRRTAERGIKKAIEQQYASVRQTIEEEIRRGFEREMRQLGRTLNS
Specific function: Unknown
COG id: COG3596
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43418; Mature: 43418
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRTGLVSNILIAGKTGVGKSAFINYIYGHDVAESRAGSPVTQEGLHEYEYYDLERGILF CCCCCCHHHHHEECCCCCCHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHCCCHHH RFFDTWGLEADRSEEWHQAILSIVHQREGALDIAEWFHTIYYLLSVQSGRVEAYELEAIL HHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH KPLYERGSNVTLILTNFNEDDPMSVQKAEAMERVLLRELPIEEEDIIRVNSVEKKLLTGK HHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCEEHHHHHHHHHCCC RVPVKGYEEVWKRNRTNLWKDIERKLPINLTNHLLDELEDWRIRSIASAEAIRMLTPQAM CCCCCCHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH ISWKARKIEKDLEKTLEEAALTTEEAMAEGVRHYIQLMQRYPLVGEQADLLFRTRRVELG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEEC FDYSFGKTVRKMVLGMIPGVHFIYWAFKRRTAERGIKKAIEQQYASVRQTIEEEIRRGFE CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH REMRQLGRTLNS HHHHHHHHHHCC >Mature Secondary Structure MDRTGLVSNILIAGKTGVGKSAFINYIYGHDVAESRAGSPVTQEGLHEYEYYDLERGILF CCCCCCHHHHHEECCCCCCHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHCCCHHH RFFDTWGLEADRSEEWHQAILSIVHQREGALDIAEWFHTIYYLLSVQSGRVEAYELEAIL HHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH KPLYERGSNVTLILTNFNEDDPMSVQKAEAMERVLLRELPIEEEDIIRVNSVEKKLLTGK HHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCEEHHHHHHHHHCCC RVPVKGYEEVWKRNRTNLWKDIERKLPINLTNHLLDELEDWRIRSIASAEAIRMLTPQAM CCCCCCHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH ISWKARKIEKDLEKTLEEAALTTEEAMAEGVRHYIQLMQRYPLVGEQADLLFRTRRVELG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEEC FDYSFGKTVRKMVLGMIPGVHFIYWAFKRRTAERGIKKAIEQQYASVRQTIEEEIRRGFE CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH REMRQLGRTLNS HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA