| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is ywbE [H]
Identifier: 229917560
GI number: 229917560
Start: 1807741
End: 1807944
Strand: Direct
Name: ywbE [H]
Synonym: EAT1b_1835
Alternate gene names: 229917560
Gene position: 1807741-1807944 (Clockwise)
Preceding gene: 229917559
Following gene: 229917561
Centisome position: 60.26
GC content: 50.0
Gene sequence:
>204_bases ATGGATGGAACGAAACGTGCTGACATTCGCCCAGGGCTCCACGTCCAAATCGTTTTAAAACAAGATCAACGAAGCGGAAA GCTGACGAAAGGCGTCGTTCAAGATATATTGACGAACTCGCCACGTCATCCGCACGGAATCAAAGTGCGTTTGAGCGATG GACAGGTCGGTCGTGTGAAAGTGATCGAAGCTGGAGGTGAGTAA
Upstream 100 bases:
>100_bases GACAGAAACGATGCGACAAATCGGCATCTGGAATAGGCTGTGACAAATGAGGGAAAAGAGCATATGATAGAGATTGACTA AATGGAAAGGGGTGTCGGGT
Downstream 100 bases:
>100_bases GATGAGCGAGAAAAAACTATCTTTTCAAGAGGCGATGAAACAAAAGCTGGCAGAGAAGAAGCAAAATCAAACGAAGGTTC CGACGGGTTTGCATGGCACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 67; Mature: 67
Protein sequence:
>67_residues MDGTKRADIRPGLHVQIVLKQDQRSGKLTKGVVQDILTNSPRHPHGIKVRLSDGQVGRVKVIEAGGE
Sequences:
>Translated_67_residues MDGTKRADIRPGLHVQIVLKQDQRSGKLTKGVVQDILTNSPRHPHGIKVRLSDGQVGRVKVIEAGGE >Mature_67_residues MDGTKRADIRPGLHVQIVLKQDQRSGKLTKGVVQDILTNSPRHPHGIKVRLSDGQVGRVKVIEAGGE
Specific function: Unknown
COG id: COG4895
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019240 [H]
Pfam domain/function: PF09962 DUF2196 [H]
EC number: NA
Molecular weight: Translated: 7292; Mature: 7292
Theoretical pI: Translated: 11.04; Mature: 11.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGTKRADIRPGLHVQIVLKQDQRSGKLTKGVVQDILTNSPRHPHGIKVRLSDGQVGRVK CCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEE VIEAGGE EEECCCC >Mature Secondary Structure MDGTKRADIRPGLHVQIVLKQDQRSGKLTKGVVQDILTNSPRHPHGIKVRLSDGQVGRVK CCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEE VIEAGGE EEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7934828; 9384377 [H]