| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229917547
Identifier: 229917547
GI number: 229917547
Start: 1789968
End: 1790723
Strand: Direct
Name: 229917547
Synonym: EAT1b_1822
Alternate gene names: NA
Gene position: 1789968-1790723 (Clockwise)
Preceding gene: 229917546
Following gene: 229917548
Centisome position: 59.67
GC content: 47.09
Gene sequence:
>756_bases ATGGGGAAATTATGGTTGATTGAAGGATTACCGGGAAGCGGGAAATCTACGTTTGCCGAGAGGCTACAAGATAAACGAAA TGGGAAGTTCTATTCGGAAGTAGATGCGTCACACCCGGTAGATGTGCATGATGTCTATTGGGTCGAGGAGAAACCATCAA CTGGTCGTATTCTTGATGAAATCGAGGGGGGATGGCTCGTCCGTTATGATGATGGTGATGAACGTGCCGGAACGGACGTC TACGAGTTGCCTTTCGCTCTTCACACACGAATCATGTGCGAACGCTGGCGGCGGTATGTTCAAAAGGTGGAGAGGGAAGA ACAGGACGTCATCTTTGAATGTGCGTTGCTCCAAAATCCTTTCACGATTGGAATGGTTTCTCAAGACGTTCCGTTAGCGG ATATGGAAACATACGTTCAAGAAGTCGCGGACATCCTAAAACCGATTGATCCGATAGTCGTTTATTTGGCGTTGAATGAC GTCGCACGCATTTTTCCAATCGTATATGATGAACGACCAATAGAATGGCAAGGCGGCTTTGTCGAGTATTATACGAGCGG TGCCTATGGCGTGAACCATAGTCGTGAGGGGGTAGTCGGGACGATTGAGATTTTAGTGGAACGTCAGCGTCGTGAACTCG AACTACTTGAACGACTCCCGCTTCGCCACGTTCAGATTCAAAACGATGAGAGACGTTCATTCGAAGAATTAACGAATATA TTGGAAGAGGAGTCTGTTCGTTCATGCAAACTTTGA
Upstream 100 bases:
>100_bases CGATTCTTCAACAAGCAGATGCAGCCATGTATATTGCAAAGAACAATGGAGGAGATCAGTGGTTTCAGTATGATGGATAT TCGGATAAGGAGATTTGAGG
Downstream 100 bases:
>100_bases TCAAACATTCGGATCGTTTTTGGTATATGACACCGGTCGACCGCACAGACCGACCGATTCTCGGTGCCGTTGTCGGCGAT ACGCATACGCTACTTATCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MGKLWLIEGLPGSGKSTFAERLQDKRNGKFYSEVDASHPVDVHDVYWVEEKPSTGRILDEIEGGWLVRYDDGDERAGTDV YELPFALHTRIMCERWRRYVQKVEREEQDVIFECALLQNPFTIGMVSQDVPLADMETYVQEVADILKPIDPIVVYLALND VARIFPIVYDERPIEWQGGFVEYYTSGAYGVNHSREGVVGTIEILVERQRRELELLERLPLRHVQIQNDERRSFEELTNI LEEESVRSCKL
Sequences:
>Translated_251_residues MGKLWLIEGLPGSGKSTFAERLQDKRNGKFYSEVDASHPVDVHDVYWVEEKPSTGRILDEIEGGWLVRYDDGDERAGTDV YELPFALHTRIMCERWRRYVQKVEREEQDVIFECALLQNPFTIGMVSQDVPLADMETYVQEVADILKPIDPIVVYLALND VARIFPIVYDERPIEWQGGFVEYYTSGAYGVNHSREGVVGTIEILVERQRRELELLERLPLRHVQIQNDERRSFEELTNI LEEESVRSCKL >Mature_250_residues GKLWLIEGLPGSGKSTFAERLQDKRNGKFYSEVDASHPVDVHDVYWVEEKPSTGRILDEIEGGWLVRYDDGDERAGTDVY ELPFALHTRIMCERWRRYVQKVEREEQDVIFECALLQNPFTIGMVSQDVPLADMETYVQEVADILKPIDPIVVYLALNDV ARIFPIVYDERPIEWQGGFVEYYTSGAYGVNHSREGVVGTIEILVERQRRELELLERLPLRHVQIQNDERRSFEELTNIL EEESVRSCKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29180; Mature: 29049
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKLWLIEGLPGSGKSTFAERLQDKRNGKFYSEVDASHPVDVHDVYWVEEKPSTGRILDE CCCEEEEECCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEEECCCCCCCHHHH IEGGWLVRYDDGDERAGTDVYELPFALHTRIMCERWRRYVQKVEREEQDVIFECALLQNP CCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC FTIGMVSQDVPLADMETYVQEVADILKPIDPIVVYLALNDVARIFPIVYDERPIEWQGGF CEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHEEHHHHHHHHHHHHHHCCCCCCCCCCCE VEYYTSGAYGVNHSREGVVGTIEILVERQRRELELLERLPLRHVQIQNDERRSFEELTNI EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHH LEEESVRSCKL HHHHHHHHCCC >Mature Secondary Structure GKLWLIEGLPGSGKSTFAERLQDKRNGKFYSEVDASHPVDVHDVYWVEEKPSTGRILDE CCEEEEECCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEEECCCCCCCHHHH IEGGWLVRYDDGDERAGTDVYELPFALHTRIMCERWRRYVQKVEREEQDVIFECALLQNP CCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC FTIGMVSQDVPLADMETYVQEVADILKPIDPIVVYLALNDVARIFPIVYDERPIEWQGGF CEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHEEHHHHHHHHHHHHHHCCCCCCCCCCCE VEYYTSGAYGVNHSREGVVGTIEILVERQRRELELLERLPLRHVQIQNDERRSFEELTNI EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHH LEEESVRSCKL HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA