| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is yoxB [H]
Identifier: 229917525
GI number: 229917525
Start: 1767825
End: 1768565
Strand: Direct
Name: yoxB [H]
Synonym: EAT1b_1800
Alternate gene names: 229917525
Gene position: 1767825-1768565 (Clockwise)
Preceding gene: 229917520
Following gene: 229917526
Centisome position: 58.93
GC content: 46.69
Gene sequence:
>741_bases ATGACGCGGACAGAGTTATTTCACACATACAAATCGAAAATTTTGCAGTTATCAAATTTAGAAGAAGAGACGTTAAAAAG TGAAGACTTTTTGTTAGACCGTGATGAAAAGAAACAACTCGACATCTATTACGCACCGTTCGAATACATCAATCCAAACG CGAAAGTCGTCATCGCGGGAATCACGCCAGGCTTGTATCAAATGCGTCAGTCGTTCGAGGCAATCCGTGACTTGAAGGAT GCAACAGACGAAGAGGCGCTTCGAGCCGTCAAACAACGTGGCAGTTTTTCCGGTCCGATTCGAAAGAACTTGGTGACGAT GCTAGACGATTTGGAGTTACATCATCATCTTGGAATCGAATCTTCCCTCGATTTGTTTGGATCAGCGAACCATCTTGTTC AAAACACGGCGGTCCTCCCTTATCCCGTCTTCTATAAAGGCAAGAACTATAACGGATCGAGCCCGGATATGATTCGAACA GAGCTGTTTCGACCATACGTAGAAGGAATCTTCGCAGAAGAGATGGCCCATCTTCAAGATGCACTCATCCTACCGATGGG CGTGAACGTGAGGCGAGCCGTGGAGTTATTGGTTGAGCGAGGTCTTTTGGATCAGGAACGTGTGGTGAGCGGGTTTCCAC ATCCGTCTGGTGGGAACGGTCATCGTCATCGCATCTTTGCTGAAAATCGAGCCGCCATGAAACGACATATTGCTGAACAC TTCAAACGACATCCACTTTGA
Upstream 100 bases:
>100_bases CTTTATTTTTGGATGGCATTTGTCTGAAAGATGAACTTTTCTCACACAAAGATTTAGGGAAATAGAGATAGAGAAAGTAG ACGAAAGGAGTGTCAGTTAC
Downstream 100 bases:
>100_bases ACCGCAGTGCGGTTCTTTTCATGTGAGCACATGAACTGACATCGACTCTTTACTTCGCTAAAATGATAAACGGTTGACTC ACTCACGAGATGTAGAAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: ORF119+ [H]
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MTRTELFHTYKSKILQLSNLEEETLKSEDFLLDRDEKKQLDIYYAPFEYINPNAKVVIAGITPGLYQMRQSFEAIRDLKD ATDEEALRAVKQRGSFSGPIRKNLVTMLDDLELHHHLGIESSLDLFGSANHLVQNTAVLPYPVFYKGKNYNGSSPDMIRT ELFRPYVEGIFAEEMAHLQDALILPMGVNVRRAVELLVERGLLDQERVVSGFPHPSGGNGHRHRIFAENRAAMKRHIAEH FKRHPL
Sequences:
>Translated_246_residues MTRTELFHTYKSKILQLSNLEEETLKSEDFLLDRDEKKQLDIYYAPFEYINPNAKVVIAGITPGLYQMRQSFEAIRDLKD ATDEEALRAVKQRGSFSGPIRKNLVTMLDDLELHHHLGIESSLDLFGSANHLVQNTAVLPYPVFYKGKNYNGSSPDMIRT ELFRPYVEGIFAEEMAHLQDALILPMGVNVRRAVELLVERGLLDQERVVSGFPHPSGGNGHRHRIFAENRAAMKRHIAEH FKRHPL >Mature_245_residues TRTELFHTYKSKILQLSNLEEETLKSEDFLLDRDEKKQLDIYYAPFEYINPNAKVVIAGITPGLYQMRQSFEAIRDLKDA TDEEALRAVKQRGSFSGPIRKNLVTMLDDLELHHHLGIESSLDLFGSANHLVQNTAVLPYPVFYKGKNYNGSSPDMIRTE LFRPYVEGIFAEEMAHLQDALILPMGVNVRRAVELLVERGLLDQERVVSGFPHPSGGNGHRHRIFAENRAAMKRHIAEHF KRHPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020530 - ProDom: PD315856 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28195; Mature: 28063
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTELFHTYKSKILQLSNLEEETLKSEDFLLDRDEKKQLDIYYAPFEYINPNAKVVIAG CCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCEEEEECCHHHCCCCCEEEEEE ITPGLYQMRQSFEAIRDLKDATDEEALRAVKQRGSFSGPIRKNLVTMLDDLELHHHLGIE CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC SSLDLFGSANHLVQNTAVLPYPVFYKGKNYNGSSPDMIRTELFRPYVEGIFAEEMAHLQD CCHHHHCCHHHHHHCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ALILPMGVNVRRAVELLVERGLLDQERVVSGFPHPSGGNGHRHRIFAENRAAMKRHIAEH HHHCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHH FKRHPL HHCCCC >Mature Secondary Structure TRTELFHTYKSKILQLSNLEEETLKSEDFLLDRDEKKQLDIYYAPFEYINPNAKVVIAG CHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCEEEEECCHHHCCCCCEEEEEE ITPGLYQMRQSFEAIRDLKDATDEEALRAVKQRGSFSGPIRKNLVTMLDDLELHHHLGIE CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC SSLDLFGSANHLVQNTAVLPYPVFYKGKNYNGSSPDMIRTELFRPYVEGIFAEEMAHLQD CCHHHHCCHHHHHHCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ALILPMGVNVRRAVELLVERGLLDQERVVSGFPHPSGGNGHRHRIFAENRAAMKRHIAEH HHHCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHH FKRHPL HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]