| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is yejH [H]
Identifier: 229917516
GI number: 229917516
Start: 1757995
End: 1760874
Strand: Direct
Name: yejH [H]
Synonym: EAT1b_1791
Alternate gene names: 229917516
Gene position: 1757995-1760874 (Clockwise)
Preceding gene: 229917514
Following gene: 229917518
Centisome position: 58.6
GC content: 33.61
Gene sequence:
>2880_bases ATGGATCATTTGAAAAGACAATTAGAAAACTCTCTTTATACTGGGTTTATAGATAAAGATCATTATCATTCTAGTCCGTT TAAACCAGAACTTTTAGTAAACGAACGAGTTAAAAGACAGGATGTATTGACCGCGTTACTCGATGAATTGAAAATTTGTA AGAAGTTTCGATTTGCTGTTGCGTTCATTACAGAATCAGGACTGGCAACACTTAAATCAACATTATATGACTTAAATCAA AAAGGTATTCGAGGCGAGATTATCACTTCTACATATCAACTGTTTAATCAGCCAAAAATGTTCAAAGAACTTTTGAAAAT TTCGAATGTTGACGTAAAAATTGCAGATGTGAATGCATTTCATTCAAAAGGATATATTTTTCAACATGAAGGCTACTTTT CGTTAATTGTTGGTAGTTCAAACTTAACTGCAGGAGCATTAAAAACAAACTACGAATGGAATATTAAACTAACATCTCAT GAAAACGGTGAAATTGTTCAACACTTTTTCAATCGATTCAAAACAATGTGGAATGAATCGATTCCTCTAACCTTAGAATG GATTAAAGCCTATGAAAATGTATATCGTCCAATGGTTAGAGATCGAGTTGCTGAGTTTCCAAGTATGCACGATTTTAATC AAGTCAAGCGGGAGCTTGAAATTAAGCCGAATGACATGCAACGTTCTGCTTTAGACGGTATTGATGCAGTCCGACAGCAA GGTCATCAACGCGCACTTGTTGTATCAGCTACGGGGACTGGGAAAACATACTTAGCTGCATTTGACGTTCGTCGATATGA ACCGAAGCGAATGTTATTTGTAGTCCATCGTGAACAAATTTTGAAAAAAGCCATAAATGATTTTCATAAAGTGATTGGTG GGAACATTGAAGATTACGGTATATTGTCAGGAACAAGTCGAGTAATTGACTCTAAATATGTGTTTGCAACGATTCAAACC ATCTCAAAGGATGAAACTTTATATCAATTTGCACAAGAAACTTTTGATTACATATTGATTGATGAAAGTCATCGGGCCGG AGCCAATACATATCAAAAACTGTTGGAGTATTTCACTCCGAAGTTCTTACTTGGAATGACCGCTACTCCTGAACGATCAG ATGGATATGATTTGTTCAGACTATTCGATTACAACATTGCATATGAAATTCGTTTACAAGAAGCACTTGAAGAAAATATG CTATGTCCATTCCATTATTTCGGGGTAACTGATCTTGAAATTGATGGGGAGCAAAAAGAAATTGAAGTGTTCCAAAAACT TGTATCAACTGAAAGAGTTGAGCGGATTATTGAAAAGATTAAATACTACGGCTATTCAGGTGAGAAGTTGCGAGGACTAA TGTTCTGCAGTTCTAAAAAAGAAGCAATATATTTGTCTGAGCAATTAAATGCTCGAGGCTTTAAAACATGTGCTTTAACC GGGGATGATACTCAAGCAAAACGAAAGCAAGAGGTAAATAATCTAGAACAGGGATTACTCGACTATATTCTCACTGTGGA CATATTTAACGAAGGGATCGATATACCAAGCATTAATCAAGTTGTAATGCTTCGACAAACTGAATCGAGTATTATCTTTA TTCAACAATTAGGAAGGGGCTTACGAAAGCATAAATCTAAACGATATGTAACCGTTATTGATTTTATAGCAAACTATAAA AATAATTATTTAATTCCAATTGCTCTCTCAGGTGATCGTTCTCAAAATAAAGATTCTATTCGTCGTAAAGTAATCGATCG GAGCTATATCTCTGGTACATCAACTATTAATTTTGAAGCGGTTGCTAAAGAACGAATTTATGAATCAATCAACCAAGCAA GATTAACCGATTTAAAAACTTTAAAAGAAGCATATCAGAACTTGAAAAATCGATTAGGTAGACAACCTATGTTGACTGAC TTTATAGATAATCACTCAATGGATCCAGTTGTTATAGCAACTAAAAATGGACATTATGGTGCTTTTTTAAGAGTTGTTGA AAGTGAAGTGCCCCCTCTTTCGAAAGAAGAAGAGCAAATTTTACTTATGGCAACCCAAGAACTTTTATCAGGTAAAAGAA TACATGAGATTTATTTGTTAAAACTTTTGGCATCTGATCTCTCTATAAGTAAATTCAATTTTATTAACTACTTACATGAT CATCATGTTCGAGTAGATGATGCAACGCTCAAATCAGTAGAGAATGTGTTATCTTTAAATTTCTTTAACGATGCAGACCG AAAGAAATATAGTAATAAGCCGTATATTGAATTTGATCGTGGCACGTATCGATTATCTTCACATATACAAACTATGTTAC AAAATGAGTGGTTTGCTAAGTTATTAAACGACTTACTAGAAGCATCAATCTTAAGAAGTAAACGATATAATCAAACAAAA CCGTTAACGAGATTGGAAAAGTATACGAGAAAAGATGTATGTCGATTATTAAATTGGGAAAAAGAAGAGCAATCTACAAT GTATGGTTATAAAGTTAAGCATCATACATGTCCTATATTTGTAACGTATCATAAAAGTGAAGACGTTGAAGCTAGTGTTA ATTATGGTGATTCCTTTATTAGTCCAGAGGTATTTCATTGGTATACTCGAAGTCGAAGAACCACAAAATCTGAAGAAGTA CGTAAAATTATTGATTCAGAGAAAGAAAACATTGATATCCATCTATTTGTGAAAAAAGATGACGATGAAGGCGGAGATTT TTATTATTTAGGTGAAGTGAAACCCGATCAACAATCTATACAAAACACAACAATGCTAAATAAAAATGGTCAAGAACTTC CTGTAGTCACTATGAATTTAATGCTAAAAGAGAGTGTCGATCAACAGATATATGATTACTTGCATGAGAAAACACATTAA
Upstream 100 bases:
>100_bases TTGATCATTTTTAGTGAAAAGCCAATAATGAAATATATGTAAAACTATTTCATATCATAGAATATATTTCAATTTACTTA ATGATAAGTAGGAGGAACAA
Downstream 100 bases:
>100_bases AAAAAGCCGAGGCGTAACTTATACGTTCTCGGCTTTAGTTATTTGATTAATCACATCATTTACTGCAGGTATGTCGGCTG GTGCCCATACAAGAGAATGT
Product: type III restriction protein res subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 959; Mature: 959
Protein sequence:
>959_residues MDHLKRQLENSLYTGFIDKDHYHSSPFKPELLVNERVKRQDVLTALLDELKICKKFRFAVAFITESGLATLKSTLYDLNQ KGIRGEIITSTYQLFNQPKMFKELLKISNVDVKIADVNAFHSKGYIFQHEGYFSLIVGSSNLTAGALKTNYEWNIKLTSH ENGEIVQHFFNRFKTMWNESIPLTLEWIKAYENVYRPMVRDRVAEFPSMHDFNQVKRELEIKPNDMQRSALDGIDAVRQQ GHQRALVVSATGTGKTYLAAFDVRRYEPKRMLFVVHREQILKKAINDFHKVIGGNIEDYGILSGTSRVIDSKYVFATIQT ISKDETLYQFAQETFDYILIDESHRAGANTYQKLLEYFTPKFLLGMTATPERSDGYDLFRLFDYNIAYEIRLQEALEENM LCPFHYFGVTDLEIDGEQKEIEVFQKLVSTERVERIIEKIKYYGYSGEKLRGLMFCSSKKEAIYLSEQLNARGFKTCALT GDDTQAKRKQEVNNLEQGLLDYILTVDIFNEGIDIPSINQVVMLRQTESSIIFIQQLGRGLRKHKSKRYVTVIDFIANYK NNYLIPIALSGDRSQNKDSIRRKVIDRSYISGTSTINFEAVAKERIYESINQARLTDLKTLKEAYQNLKNRLGRQPMLTD FIDNHSMDPVVIATKNGHYGAFLRVVESEVPPLSKEEEQILLMATQELLSGKRIHEIYLLKLLASDLSISKFNFINYLHD HHVRVDDATLKSVENVLSLNFFNDADRKKYSNKPYIEFDRGTYRLSSHIQTMLQNEWFAKLLNDLLEASILRSKRYNQTK PLTRLEKYTRKDVCRLLNWEKEEQSTMYGYKVKHHTCPIFVTYHKSEDVEASVNYGDSFISPEVFHWYTRSRRTTKSEEV RKIIDSEKENIDIHLFVKKDDDEGGDFYYLGEVKPDQQSIQNTTMLNKNGQELPVVTMNLMLKESVDQQIYDYLHEKTH
Sequences:
>Translated_959_residues MDHLKRQLENSLYTGFIDKDHYHSSPFKPELLVNERVKRQDVLTALLDELKICKKFRFAVAFITESGLATLKSTLYDLNQ KGIRGEIITSTYQLFNQPKMFKELLKISNVDVKIADVNAFHSKGYIFQHEGYFSLIVGSSNLTAGALKTNYEWNIKLTSH ENGEIVQHFFNRFKTMWNESIPLTLEWIKAYENVYRPMVRDRVAEFPSMHDFNQVKRELEIKPNDMQRSALDGIDAVRQQ GHQRALVVSATGTGKTYLAAFDVRRYEPKRMLFVVHREQILKKAINDFHKVIGGNIEDYGILSGTSRVIDSKYVFATIQT ISKDETLYQFAQETFDYILIDESHRAGANTYQKLLEYFTPKFLLGMTATPERSDGYDLFRLFDYNIAYEIRLQEALEENM LCPFHYFGVTDLEIDGEQKEIEVFQKLVSTERVERIIEKIKYYGYSGEKLRGLMFCSSKKEAIYLSEQLNARGFKTCALT GDDTQAKRKQEVNNLEQGLLDYILTVDIFNEGIDIPSINQVVMLRQTESSIIFIQQLGRGLRKHKSKRYVTVIDFIANYK NNYLIPIALSGDRSQNKDSIRRKVIDRSYISGTSTINFEAVAKERIYESINQARLTDLKTLKEAYQNLKNRLGRQPMLTD FIDNHSMDPVVIATKNGHYGAFLRVVESEVPPLSKEEEQILLMATQELLSGKRIHEIYLLKLLASDLSISKFNFINYLHD HHVRVDDATLKSVENVLSLNFFNDADRKKYSNKPYIEFDRGTYRLSSHIQTMLQNEWFAKLLNDLLEASILRSKRYNQTK PLTRLEKYTRKDVCRLLNWEKEEQSTMYGYKVKHHTCPIFVTYHKSEDVEASVNYGDSFISPEVFHWYTRSRRTTKSEEV RKIIDSEKENIDIHLFVKKDDDEGGDFYYLGEVKPDQQSIQNTTMLNKNGQELPVVTMNLMLKESVDQQIYDYLHEKTH >Mature_959_residues MDHLKRQLENSLYTGFIDKDHYHSSPFKPELLVNERVKRQDVLTALLDELKICKKFRFAVAFITESGLATLKSTLYDLNQ KGIRGEIITSTYQLFNQPKMFKELLKISNVDVKIADVNAFHSKGYIFQHEGYFSLIVGSSNLTAGALKTNYEWNIKLTSH ENGEIVQHFFNRFKTMWNESIPLTLEWIKAYENVYRPMVRDRVAEFPSMHDFNQVKRELEIKPNDMQRSALDGIDAVRQQ GHQRALVVSATGTGKTYLAAFDVRRYEPKRMLFVVHREQILKKAINDFHKVIGGNIEDYGILSGTSRVIDSKYVFATIQT ISKDETLYQFAQETFDYILIDESHRAGANTYQKLLEYFTPKFLLGMTATPERSDGYDLFRLFDYNIAYEIRLQEALEENM LCPFHYFGVTDLEIDGEQKEIEVFQKLVSTERVERIIEKIKYYGYSGEKLRGLMFCSSKKEAIYLSEQLNARGFKTCALT GDDTQAKRKQEVNNLEQGLLDYILTVDIFNEGIDIPSINQVVMLRQTESSIIFIQQLGRGLRKHKSKRYVTVIDFIANYK NNYLIPIALSGDRSQNKDSIRRKVIDRSYISGTSTINFEAVAKERIYESINQARLTDLKTLKEAYQNLKNRLGRQPMLTD FIDNHSMDPVVIATKNGHYGAFLRVVESEVPPLSKEEEQILLMATQELLSGKRIHEIYLLKLLASDLSISKFNFINYLHD HHVRVDDATLKSVENVLSLNFFNDADRKKYSNKPYIEFDRGTYRLSSHIQTMLQNEWFAKLLNDLLEASILRSKRYNQTK PLTRLEKYTRKDVCRLLNWEKEEQSTMYGYKVKHHTCPIFVTYHKSEDVEASVNYGDSFISPEVFHWYTRSRRTTKSEEV RKIIDSEKENIDIHLFVKKDDDEGGDFYYLGEVKPDQQSIQNTTMLNKNGQELPVVTMNLMLKESVDQQIYDYLHEKTH
Specific function: Unknown
COG id: COG1061
COG function: function code KL; DNA or RNA helicases of superfamily II
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1788511, Length=366, Percent_Identity=23.7704918032787, Blast_Score=90, Evalue=8e-19, Organism=Saccharomyces cerevisiae, GI6320539, Length=403, Percent_Identity=25.0620347394541, Blast_Score=125, Evalue=3e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR006935 [H]
Pfam domain/function: PF00271 Helicase_C; PF04851 ResIII [H]
EC number: NA
Molecular weight: Translated: 111747; Mature: 111747
Theoretical pI: Translated: 7.47; Mature: 7.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDHLKRQLENSLYTGFIDKDHYHSSPFKPELLVNERVKRQDVLTALLDELKICKKFRFAV CCHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFITESGLATLKSTLYDLNQKGIRGEIITSTYQLFNQPKMFKELLKISNVDVKIADVNAF EEEHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECEEE HSKGYIFQHEGYFSLIVGSSNLTAGALKTNYEWNIKLTSHENGEIVQHFFNRFKTMWNES CCCCEEEEECCEEEEEEECCCCCCCEEECCEEEEEEEECCCCCHHHHHHHHHHHHHHCCC IPLTLEWIKAYENVYRPMVRDRVAEFPSMHDFNQVKRELEIKPNDMQRSALDGIDAVRQQ CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHC GHQRALVVSATGTGKTYLAAFDVRRYEPKRMLFVVHREQILKKAINDFHKVIGGNIEDYG CCCEEEEEEECCCCCEEEEEEHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCE ILSGTSRVIDSKYVFATIQTISKDETLYQFAQETFDYILIDESHRAGANTYQKLLEYFTP EECCCHHHHCCCEEEEEEHHHCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCC KFLLGMTATPERSDGYDLFRLFDYNIAYEIRLQEALEENMLCPFHYFGVTDLEIDGEQKE HHEECCCCCCCCCCCCCEEEEEECCEEEEEEEHHHHHHCCCCCEEECCCEEEEECCCHHH IEVFQKLVSTERVERIIEKIKYYGYSGEKLRGLMFCSSKKEAIYLSEQLNARGFKTCALT HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEEECCCCCEEEEEHHCCCCCCEEEEEC GDDTQAKRKQEVNNLEQGLLDYILTVDIFNEGIDIPSINQVVMLRQTESSIIFIQQLGRG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEHHHHHHH LRKHKSKRYVTVIDFIANYKNNYLIPIALSGDRSQNKDSIRRKVIDRSYISGTSTINFEA HHHHCCCCEEHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEHHH VAKERIYESINQARLTDLKTLKEAYQNLKNRLGRQPMLTDFIDNHSMDPVVIATKNGHYG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCEEEEECCCCCH AFLRVVESEVPPLSKEEEQILLMATQELLSGKRIHEIYLLKLLASDLSISKFNFINYLHD HHHHHHHHCCCCCCCCCHHHHHEEHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH HHVRVDDATLKSVENVLSLNFFNDADRKKYSNKPYIEFDRGTYRLSSHIQTMLQNEWFAK CCEEECHHHHHHHHHHHHEECCCCCHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHH LLNDLLEASILRSKRYNQTKPLTRLEKYTRKDVCRLLNWEKEEQSTMYGYKVKHHTCPIF HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHCCCCCCEEEECCCCEEE VTYHKSEDVEASVNYGDSFISPEVFHWYTRSRRTTKSEEVRKIIDSEKENIDIHLFVKKD EEEECCCCCEEECCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEEEEEEC DDEGGDFYYLGEVKPDQQSIQNTTMLNKNGQELPVVTMNLMLKESVDQQIYDYLHEKTH CCCCCCEEEECCCCCCHHHHHHHHEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDHLKRQLENSLYTGFIDKDHYHSSPFKPELLVNERVKRQDVLTALLDELKICKKFRFAV CCHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFITESGLATLKSTLYDLNQKGIRGEIITSTYQLFNQPKMFKELLKISNVDVKIADVNAF EEEHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECEEE HSKGYIFQHEGYFSLIVGSSNLTAGALKTNYEWNIKLTSHENGEIVQHFFNRFKTMWNES CCCCEEEEECCEEEEEEECCCCCCCEEECCEEEEEEEECCCCCHHHHHHHHHHHHHHCCC IPLTLEWIKAYENVYRPMVRDRVAEFPSMHDFNQVKRELEIKPNDMQRSALDGIDAVRQQ CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHC GHQRALVVSATGTGKTYLAAFDVRRYEPKRMLFVVHREQILKKAINDFHKVIGGNIEDYG CCCEEEEEEECCCCCEEEEEEHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCE ILSGTSRVIDSKYVFATIQTISKDETLYQFAQETFDYILIDESHRAGANTYQKLLEYFTP EECCCHHHHCCCEEEEEEHHHCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCC KFLLGMTATPERSDGYDLFRLFDYNIAYEIRLQEALEENMLCPFHYFGVTDLEIDGEQKE HHEECCCCCCCCCCCCCEEEEEECCEEEEEEEHHHHHHCCCCCEEECCCEEEEECCCHHH IEVFQKLVSTERVERIIEKIKYYGYSGEKLRGLMFCSSKKEAIYLSEQLNARGFKTCALT HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEEECCCCCEEEEEHHCCCCCCEEEEEC GDDTQAKRKQEVNNLEQGLLDYILTVDIFNEGIDIPSINQVVMLRQTESSIIFIQQLGRG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEHHHHHHH LRKHKSKRYVTVIDFIANYKNNYLIPIALSGDRSQNKDSIRRKVIDRSYISGTSTINFEA HHHHCCCCEEHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEHHH VAKERIYESINQARLTDLKTLKEAYQNLKNRLGRQPMLTDFIDNHSMDPVVIATKNGHYG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCEEEEECCCCCH AFLRVVESEVPPLSKEEEQILLMATQELLSGKRIHEIYLLKLLASDLSISKFNFINYLHD HHHHHHHHCCCCCCCCCHHHHHEEHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH HHVRVDDATLKSVENVLSLNFFNDADRKKYSNKPYIEFDRGTYRLSSHIQTMLQNEWFAK CCEEECHHHHHHHHHHHHEECCCCCHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHH LLNDLLEASILRSKRYNQTKPLTRLEKYTRKDVCRLLNWEKEEQSTMYGYKVKHHTCPIF HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHCCCCCCEEEECCCCEEE VTYHKSEDVEASVNYGDSFISPEVFHWYTRSRRTTKSEEVRKIIDSEKENIDIHLFVKKD EEEECCCCCEEECCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEEEEEEC DDEGGDFYYLGEVKPDQQSIQNTTMLNKNGQELPVVTMNLMLKESVDQQIYDYLHEKTH CCCCCCEEEECCCCCCHHHHHHHHEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]