| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229917485
Identifier: 229917485
GI number: 229917485
Start: 1727924
End: 1728874
Strand: Direct
Name: 229917485
Synonym: EAT1b_1760
Alternate gene names: NA
Gene position: 1727924-1728874 (Clockwise)
Preceding gene: 229917484
Following gene: 229917486
Centisome position: 57.6
GC content: 35.96
Gene sequence:
>951_bases ATGGAATCGAAAAAAGATTCATTGACGAGAAAGCGGACTTCTACATTTCAACGGTATTTATTACCGATTACGCTTGTCTC ATCGCTTATCGTATCAGGTTCAGTAAGTTACGTAGTGAGCAAGTTAAATCAGTCTGAATCAGAAAAAGTCTTTGCAGATC AATCCTCTCAAATGAAAATTGAGCAGATGCAACAAGATTCACTCGCCGTCATTGAAGAAGAAACCCCAAAAATTTTAGAC GATTTGAAGGAGTACGAGAAAGATTTATCTGAGGTTGTCACTCAAATCGAGCTAGTAAATGAAAATCTATTTTCCGTTCG AAAGGTACTGGATCAAGTTGATTCAGCTACTCTTTTTTTGTCGAGTATAAACAGCGTGGTTAATCATCCGTTGTTAAGTA GGATTAGTGGCTATGTAAGTAATGCAAATAGTACTTTGACTGAACTAGACGCCGTTTTATTTCGATTAGAGCATCTTTCA AAAGTAAAAGCAGAGATGAATGACACCCGTGAGCGCATTGAGAAAATAAATAGTGAGTATCAAACGTCGCAAGATTCAGC TGTTTTAATTAAGATGGAAAAAGAACTGGATTCTGAATTAATTTATCAAATTGAAGATATTCGGAACTCAACTGTGGAGG CACATGATGCATTAGAAATCTCTTCAAAAGTTCTTTTACAAGTAAACAAAGCTGTCGCTACCTATCATTCTTTTCAATCA TCGAGTGAAAAAGTAATCCAATCTCTGCAATTTTGGAAAGAGAAGAAACAAGTGACTAAGATTGATCAAAGCCAACATGA ACAATTTATGAAAGAGCTTGATGAATCGTCTGAACGATTGAAAAATTTACCGGAGGATTTGGCTAAACGTTCTAATGAAA CGATCTCTTCTATCAATTCGGTGAAGTCAGAACTTCAAATGATTCGTCTGACAGAAGCTATACAGGATTGA
Upstream 100 bases:
>100_bases ATAGAAATACAATTGTTGTTGTAAGAATCAGCCATTACAATATAGATAATTACCATCAAAAAATAATTTTTTCATTATAT TTAAAGGAGATTCGTTACAT
Downstream 100 bases:
>100_bases AAATTTTATCACAAGGAGACTACGATGAACGCTACGATTCAACTCCTAACAAACCGACTAGACCCAAACTTTCTAAACAC CTTCGAACGTTTCCAGGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MESKKDSLTRKRTSTFQRYLLPITLVSSLIVSGSVSYVVSKLNQSESEKVFADQSSQMKIEQMQQDSLAVIEEETPKILD DLKEYEKDLSEVVTQIELVNENLFSVRKVLDQVDSATLFLSSINSVVNHPLLSRISGYVSNANSTLTELDAVLFRLEHLS KVKAEMNDTRERIEKINSEYQTSQDSAVLIKMEKELDSELIYQIEDIRNSTVEAHDALEISSKVLLQVNKAVATYHSFQS SSEKVIQSLQFWKEKKQVTKIDQSQHEQFMKELDESSERLKNLPEDLAKRSNETISSINSVKSELQMIRLTEAIQD
Sequences:
>Translated_316_residues MESKKDSLTRKRTSTFQRYLLPITLVSSLIVSGSVSYVVSKLNQSESEKVFADQSSQMKIEQMQQDSLAVIEEETPKILD DLKEYEKDLSEVVTQIELVNENLFSVRKVLDQVDSATLFLSSINSVVNHPLLSRISGYVSNANSTLTELDAVLFRLEHLS KVKAEMNDTRERIEKINSEYQTSQDSAVLIKMEKELDSELIYQIEDIRNSTVEAHDALEISSKVLLQVNKAVATYHSFQS SSEKVIQSLQFWKEKKQVTKIDQSQHEQFMKELDESSERLKNLPEDLAKRSNETISSINSVKSELQMIRLTEAIQD >Mature_316_residues MESKKDSLTRKRTSTFQRYLLPITLVSSLIVSGSVSYVVSKLNQSESEKVFADQSSQMKIEQMQQDSLAVIEEETPKILD DLKEYEKDLSEVVTQIELVNENLFSVRKVLDQVDSATLFLSSINSVVNHPLLSRISGYVSNANSTLTELDAVLFRLEHLS KVKAEMNDTRERIEKINSEYQTSQDSAVLIKMEKELDSELIYQIEDIRNSTVEAHDALEISSKVLLQVNKAVATYHSFQS SSEKVIQSLQFWKEKKQVTKIDQSQHEQFMKELDESSERLKNLPEDLAKRSNETISSINSVKSELQMIRLTEAIQD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36090; Mature: 36090
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESKKDSLTRKRTSTFQRYLLPITLVSSLIVSGSVSYVVSKLNQSESEKVFADQSSQMKI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHCCCHHHHH EQMQQDSLAVIEEETPKILDDLKEYEKDLSEVVTQIELVNENLFSVRKVLDQVDSATLFL HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSINSVVNHPLLSRISGYVSNANSTLTELDAVLFRLEHLSKVKAEMNDTRERIEKINSEY HHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QTSQDSAVLIKMEKELDSELIYQIEDIRNSTVEAHDALEISSKVLLQVNKAVATYHSFQS HCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SSEKVIQSLQFWKEKKQVTKIDQSQHEQFMKELDESSERLKNLPEDLAKRSNETISSINS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHH VKSELQMIRLTEAIQD HHHHHHHHHHHHHHCC >Mature Secondary Structure MESKKDSLTRKRTSTFQRYLLPITLVSSLIVSGSVSYVVSKLNQSESEKVFADQSSQMKI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHCCCHHHHH EQMQQDSLAVIEEETPKILDDLKEYEKDLSEVVTQIELVNENLFSVRKVLDQVDSATLFL HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSINSVVNHPLLSRISGYVSNANSTLTELDAVLFRLEHLSKVKAEMNDTRERIEKINSEY HHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QTSQDSAVLIKMEKELDSELIYQIEDIRNSTVEAHDALEISSKVLLQVNKAVATYHSFQS HCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SSEKVIQSLQFWKEKKQVTKIDQSQHEQFMKELDESSERLKNLPEDLAKRSNETISSINS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHH VKSELQMIRLTEAIQD HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA