| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is guaB [H]
Identifier: 229917448
GI number: 229917448
Start: 1683967
End: 1685430
Strand: Reverse
Name: guaB [H]
Synonym: EAT1b_1723
Alternate gene names: 229917448
Gene position: 1685430-1683967 (Counterclockwise)
Preceding gene: 229917449
Following gene: 229917443
Centisome position: 56.18
GC content: 47.54
Gene sequence:
>1464_bases ATGTGGGAAAATAAGTTTGCAAAAGAAGGTTTAACATTTGATGATGTATTACTCGTACCACGGTTTTCAAATGTTTTACC ACGTGATGTTGATTTAAGCACGAAGCTCTGTGAAGGACTCGAATTAAATATTCCAATCATCAGTGCTGGTATGGATACCG TCACTGAAGCCCCAATGGCAATCGCTATGGCCCGTCAAGGCGGTTTAGGTGTCATTCACAAGAACATGTCGATGGAAATG CAGGCTGAGCACGTCGATCGCGTAAAGCGCTCAGAAAATGGTGTCATCACAAATCCGTTCTATTTAACTCCAGACCGTCA AGTATATGATGCAGAATACTTGATGAGTAAGTACCGTATTTCGGGCGTTCCAATCGTCAACTCAGAAGAAGAGCGTCAAT TGATTGGTATTTTAACGAATCGTGATCTTCGCTTCATCAAAGACTATTCGACGGTGATCAAAGATGTCATGACGACAGAG AACCTTATCACAGCAAAAGTGGGTACATCACTTGAAGAAGCCGAGCGCATCCTTCATCAACATCGCATCGAGAAACTTCC ACTTGTCGATGAGAACGGTGTATTGAAAGGTCTCATTACGACGAAAGACATCGAGAAGGTCGAACAGTTCCCGAACGCAG CAAAAGATAAGCAAGGTCGTCTTCTTGTCGCAGCTGCAGTCGGTGTGACGAAAGACGCGGCCTCACGTGCTCAAGTGTTG GTTGAAGCAGGTGTGGATGCACTAGTCATCGATACGGCACACGGCCACTCAGCTGGCGTACTTGAAAAAGTTCGTGAATT ACGTGATATGTTCCCATCTCTTCCAATCATCGCAGGGAACGTGGCGACAGCAGAAGCGACACGTGCATTGATTGAAGCAG GAGCATCCGTCATTAAAGTTGGGATTGGACCAGGCTCAATCTGTACGACACGTGTTGTCGCAGGTGTCGGTGTTCCACAA ATCACAGCAGTCTATGATTGTGTGATGGAAGCGAAAGAGCACGGTGTCTCAGTCATCGCTGACGGTGGAATCAAGTACTC TGGTGATATCGTCAAAGCGATTGCCGCAGGAGCCAACGCAGTCATGCTCGGAAGCTTGCTTGCAGGTGTGAAAGAGAGTC CAGGTGAGATGGAAATCTACCAAGGTCGTCAATTCAAGACGTACCGTGGTATGGGATCGGAAGCATCGATGAAACGTGGT AGTCAAGACCGTTACTTCCAAGAAGCGGACAAAAAGTTCGTTCCAGAAGGTATCGAAGGTCGCGTCGCGTATCGCGGTGA ACTAGCTGACACGGTCTATCAATTGATCGGTGGTCTTCGTTCAGGTATGGGGTATTGCGGCGCTGCCGACATTCGTGCCC TTCGTGAAGACACACAGTTCATTCGTATGACAGGTGCTGGACTCCAAGAGAGCCACCCACACGATGTCAACATCACAAAA GAAGCACCAAACTATTCACGTTAA
Upstream 100 bases:
>100_bases ATCGGGAATTGAATTGCACTTTTGCGTTATACCTGTTACCATTACAGAAATATTTCGAAACAAAGATGTAGGTAGAACGA GAAAGGGGCCATCAATTTTT
Downstream 100 bases:
>100_bases TGAAAAGCCGCCATCCTGTTCACTCAGGATGGCGGTTCTTTATTTGCGTTTCTCGACTAAAATGACAGTTCCTCCCTGAT CTTGTGCAGGAAGTGAAACG
Product: inosine-5'-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 487; Mature: 487
Protein sequence:
>487_residues MWENKFAKEGLTFDDVLLVPRFSNVLPRDVDLSTKLCEGLELNIPIISAGMDTVTEAPMAIAMARQGGLGVIHKNMSMEM QAEHVDRVKRSENGVITNPFYLTPDRQVYDAEYLMSKYRISGVPIVNSEEERQLIGILTNRDLRFIKDYSTVIKDVMTTE NLITAKVGTSLEEAERILHQHRIEKLPLVDENGVLKGLITTKDIEKVEQFPNAAKDKQGRLLVAAAVGVTKDAASRAQVL VEAGVDALVIDTAHGHSAGVLEKVRELRDMFPSLPIIAGNVATAEATRALIEAGASVIKVGIGPGSICTTRVVAGVGVPQ ITAVYDCVMEAKEHGVSVIADGGIKYSGDIVKAIAAGANAVMLGSLLAGVKESPGEMEIYQGRQFKTYRGMGSEASMKRG SQDRYFQEADKKFVPEGIEGRVAYRGELADTVYQLIGGLRSGMGYCGAADIRALREDTQFIRMTGAGLQESHPHDVNITK EAPNYSR
Sequences:
>Translated_487_residues MWENKFAKEGLTFDDVLLVPRFSNVLPRDVDLSTKLCEGLELNIPIISAGMDTVTEAPMAIAMARQGGLGVIHKNMSMEM QAEHVDRVKRSENGVITNPFYLTPDRQVYDAEYLMSKYRISGVPIVNSEEERQLIGILTNRDLRFIKDYSTVIKDVMTTE NLITAKVGTSLEEAERILHQHRIEKLPLVDENGVLKGLITTKDIEKVEQFPNAAKDKQGRLLVAAAVGVTKDAASRAQVL VEAGVDALVIDTAHGHSAGVLEKVRELRDMFPSLPIIAGNVATAEATRALIEAGASVIKVGIGPGSICTTRVVAGVGVPQ ITAVYDCVMEAKEHGVSVIADGGIKYSGDIVKAIAAGANAVMLGSLLAGVKESPGEMEIYQGRQFKTYRGMGSEASMKRG SQDRYFQEADKKFVPEGIEGRVAYRGELADTVYQLIGGLRSGMGYCGAADIRALREDTQFIRMTGAGLQESHPHDVNITK EAPNYSR >Mature_487_residues MWENKFAKEGLTFDDVLLVPRFSNVLPRDVDLSTKLCEGLELNIPIISAGMDTVTEAPMAIAMARQGGLGVIHKNMSMEM QAEHVDRVKRSENGVITNPFYLTPDRQVYDAEYLMSKYRISGVPIVNSEEERQLIGILTNRDLRFIKDYSTVIKDVMTTE NLITAKVGTSLEEAERILHQHRIEKLPLVDENGVLKGLITTKDIEKVEQFPNAAKDKQGRLLVAAAVGVTKDAASRAQVL VEAGVDALVIDTAHGHSAGVLEKVRELRDMFPSLPIIAGNVATAEATRALIEAGASVIKVGIGPGSICTTRVVAGVGVPQ ITAVYDCVMEAKEHGVSVIADGGIKYSGDIVKAIAAGANAVMLGSLLAGVKESPGEMEIYQGRQFKTYRGMGSEASMKRG SQDRYFQEADKKFVPEGIEGRVAYRGELADTVYQLIGGLRSGMGYCGAADIRALREDTQFIRMTGAGLQESHPHDVNITK EAPNYSR
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI217035146, Length=455, Percent_Identity=41.5384615384615, Blast_Score=342, Evalue=4e-94, Organism=Homo sapiens, GI34328930, Length=455, Percent_Identity=41.5384615384615, Blast_Score=342, Evalue=6e-94, Organism=Homo sapiens, GI156616279, Length=455, Percent_Identity=41.5384615384615, Blast_Score=341, Evalue=7e-94, Organism=Homo sapiens, GI34328928, Length=455, Percent_Identity=41.5384615384615, Blast_Score=341, Evalue=7e-94, Organism=Homo sapiens, GI66933016, Length=453, Percent_Identity=40.6181015452539, Blast_Score=339, Evalue=4e-93, Organism=Homo sapiens, GI217035152, Length=447, Percent_Identity=41.6107382550336, Blast_Score=333, Evalue=1e-91, Organism=Homo sapiens, GI217035148, Length=455, Percent_Identity=40.8791208791209, Blast_Score=332, Evalue=7e-91, Organism=Homo sapiens, GI217035150, Length=455, Percent_Identity=38.9010989010989, Blast_Score=305, Evalue=6e-83, Organism=Homo sapiens, GI50541954, Length=246, Percent_Identity=40.650406504065, Blast_Score=170, Evalue=2e-42, Organism=Homo sapiens, GI50541952, Length=246, Percent_Identity=40.650406504065, Blast_Score=170, Evalue=2e-42, Organism=Homo sapiens, GI50541948, Length=246, Percent_Identity=40.650406504065, Blast_Score=170, Evalue=2e-42, Organism=Homo sapiens, GI50541956, Length=246, Percent_Identity=40.650406504065, Blast_Score=170, Evalue=2e-42, Organism=Homo sapiens, GI156104880, Length=246, Percent_Identity=39.0243902439024, Blast_Score=163, Evalue=3e-40, Organism=Escherichia coli, GI1788855, Length=484, Percent_Identity=56.4049586776859, Blast_Score=495, Evalue=1e-141, Organism=Escherichia coli, GI1786293, Length=264, Percent_Identity=37.5, Blast_Score=162, Evalue=6e-41, Organism=Caenorhabditis elegans, GI71994385, Length=475, Percent_Identity=37.6842105263158, Blast_Score=290, Evalue=1e-78, Organism=Caenorhabditis elegans, GI71994389, Length=424, Percent_Identity=38.6792452830189, Blast_Score=272, Evalue=2e-73, Organism=Caenorhabditis elegans, GI17560440, Length=221, Percent_Identity=41.6289592760181, Blast_Score=169, Evalue=3e-42, Organism=Saccharomyces cerevisiae, GI6323585, Length=458, Percent_Identity=39.5196506550218, Blast_Score=331, Evalue=2e-91, Organism=Saccharomyces cerevisiae, GI6322012, Length=458, Percent_Identity=38.4279475982533, Blast_Score=327, Evalue=3e-90, Organism=Saccharomyces cerevisiae, GI6323464, Length=458, Percent_Identity=39.5196506550218, Blast_Score=324, Evalue=2e-89, Organism=Saccharomyces cerevisiae, GI6319352, Length=338, Percent_Identity=39.0532544378698, Blast_Score=249, Evalue=7e-67, Organism=Saccharomyces cerevisiae, GI6319353, Length=116, Percent_Identity=37.0689655172414, Blast_Score=78, Evalue=3e-15, Organism=Drosophila melanogaster, GI24641071, Length=479, Percent_Identity=39.6659707724426, Blast_Score=331, Evalue=9e-91, Organism=Drosophila melanogaster, GI24641073, Length=479, Percent_Identity=39.6659707724426, Blast_Score=331, Evalue=9e-91, Organism=Drosophila melanogaster, GI28571163, Length=437, Percent_Identity=39.8169336384439, Blast_Score=295, Evalue=4e-80,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 52852; Mature: 52852
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWENKFAKEGLTFDDVLLVPRFSNVLPRDVDLSTKLCEGLELNIPIISAGMDTVTEAPMA CCCCCHHHCCCCHHHEEECCCHHCCCCCCCCCHHHHHCCCCCCCEEEECCCHHHHHCHHH IAMARQGGLGVIHKNMSMEMQAEHVDRVKRSENGVITNPFYLTPDRQVYDAEYLMSKYRI HHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEECCEEECCCCCHHHHHHHHHHHHC SGVPIVNSEEERQLIGILTNRDLRFIKDYSTVIKDVMTTENLITAKVGTSLEEAERILHQ CCCCEECCHHHHHHEEEHCCCCHHHHHHHHHHHHHHHHHCCEEEEHHCCCHHHHHHHHHH HRIEKLPLVDENGVLKGLITTKDIEKVEQFPNAAKDKQGRLLVAAAVGVTKDAASRAQVL HHHHHCCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHH VEAGVDALVIDTAHGHSAGVLEKVRELRDMFPSLPIIAGNVATAEATRALIEAGASVIKV HHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHCCCCEEEE GIGPGSICTTRVVAGVGVPQITAVYDCVMEAKEHGVSVIADGGIKYSGDIVKAIAAGANA ECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEEECCCEEECCHHHHHHHCCCCH VMLGSLLAGVKESPGEMEIYQGRQFKTYRGMGSEASMKRGSQDRYFQEADKKFVPEGIEG HHHHHHHHHHCCCCCCEEEECCCEEEHHCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCC RVAYRGELADTVYQLIGGLRSGMGYCGAADIRALREDTQFIRMTGAGLQESHPHDVNITK CEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEC EAPNYSR CCCCCCC >Mature Secondary Structure MWENKFAKEGLTFDDVLLVPRFSNVLPRDVDLSTKLCEGLELNIPIISAGMDTVTEAPMA CCCCCHHHCCCCHHHEEECCCHHCCCCCCCCCHHHHHCCCCCCCEEEECCCHHHHHCHHH IAMARQGGLGVIHKNMSMEMQAEHVDRVKRSENGVITNPFYLTPDRQVYDAEYLMSKYRI HHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEECCEEECCCCCHHHHHHHHHHHHC SGVPIVNSEEERQLIGILTNRDLRFIKDYSTVIKDVMTTENLITAKVGTSLEEAERILHQ CCCCEECCHHHHHHEEEHCCCCHHHHHHHHHHHHHHHHHCCEEEEHHCCCHHHHHHHHHH HRIEKLPLVDENGVLKGLITTKDIEKVEQFPNAAKDKQGRLLVAAAVGVTKDAASRAQVL HHHHHCCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHH VEAGVDALVIDTAHGHSAGVLEKVRELRDMFPSLPIIAGNVATAEATRALIEAGASVIKV HHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHCCCCEEEE GIGPGSICTTRVVAGVGVPQITAVYDCVMEAKEHGVSVIADGGIKYSGDIVKAIAAGANA ECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEEECCCEEECCHHHHHHHCCCCH VMLGSLLAGVKESPGEMEIYQGRQFKTYRGMGSEASMKRGSQDRYFQEADKKFVPEGIEG HHHHHHHHHHCCCCCCEEEECCCEEEHHCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCC RVAYRGELADTVYQLIGGLRSGMGYCGAADIRALREDTQFIRMTGAGLQESHPHDVNITK CEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEC EAPNYSR CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]