| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is prs [H]
Identifier: 229917412
GI number: 229917412
Start: 1638837
End: 1639793
Strand: Reverse
Name: prs [H]
Synonym: EAT1b_1687
Alternate gene names: 229917412
Gene position: 1639793-1638837 (Counterclockwise)
Preceding gene: 229917413
Following gene: 229917411
Centisome position: 54.66
GC content: 48.38
Gene sequence:
>957_bases ATGTCTACTGTATACGAACGAGAAATTCGTCTATTTAGCTTAAACTCGAACCGCCCGCTTGCTGAAGAAATCGCGAAAGA AATTGGTGTTCCGCTCAGCGATTGCCAAGTCAAACGTTTCAGCGACGGTGAACTCTATATCAACATCGAGGAAAGTGTTC GTGGAGATGATGTGTATGTCATCCAATCAACAAGCTCACCTGTAAACGAAACGCTCATGGAATTACTTGTCATGATCGAT GCACTCAAACGTGCTTCTGTCCGTACGATCAACATCGTGATGCCGTATTACGGGTATGCACGTCAAGACCGTAAAGCACG CTCGCGTGAACCGATCACGGCGAAACTTGTCGCTGACCTTCTTACAGTAGCGGGTGCGACACGCGTCATCACGATGGATT TGCATGCAGCGCAAATTCAAGGATTCTTCAATATTCCGGTTGACCAATTACTTGGTGTACCGCTCATCTCGACTTACTTT GAAACAGAAGAGTTTCAAGCGAAAGACATCGTGGTCGTTTCTCCAGACCACGGTGGCGTGACACGTGCACGTAAATTGGC AGAACGTTTGAAAGCGCCGATTGCCATCATTGACAAGCGTCGTCCGAAAGCGAACGTCGCCGAAGTCATGAACATCGTCG GTAGCGTCGAAGGGAAAACGGCGATTTTGATTGACGACATCATCGATACAGCTGGAACGATCACACTTGCGGCTGATGCT ATCGTCGAAGCGGGTGCGAAAGAAGTGTATGCGTCTTGTACACACCCAGTTCTTTCTGGTCCAGCGATGGAGCGGATCGA CAATTCATCAATCAAAGAGTTGGTCGTCTTAAATACCATCGATTTGACGGGTCGCCCTTGCTCGAGCAAGATCAAGCAAA TGTCGGTCGCCCATTTGCTTGGGGAAGCGATTATGCGCGTACACGAGCATAAATCGGTCAGTACCCTATTCGATTAA
Upstream 100 bases:
>100_bases GCTAGCGATTGCACGCGAACGCCAAACGAATAAAGAAGGCTACACAAAACGATAACTTGCTGCCAATCATTATGGAAAAC GATGGAGGAGAATCCTAAAC
Downstream 100 bases:
>100_bases AAAACGAGGCCCGGAGGCATTCGCCTTTGGGCTTTTTTGTTCAGGAGGAAATGATATGAAATGCATCGTCGGTCTTGGGA ATCCCGGGAAAAAGTTTGAG
Product: ribose-phosphate pyrophosphokinase
Products: NA
Alternate protein names: RPPK; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase [H]
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MSTVYEREIRLFSLNSNRPLAEEIAKEIGVPLSDCQVKRFSDGELYINIEESVRGDDVYVIQSTSSPVNETLMELLVMID ALKRASVRTINIVMPYYGYARQDRKARSREPITAKLVADLLTVAGATRVITMDLHAAQIQGFFNIPVDQLLGVPLISTYF ETEEFQAKDIVVVSPDHGGVTRARKLAERLKAPIAIIDKRRPKANVAEVMNIVGSVEGKTAILIDDIIDTAGTITLAADA IVEAGAKEVYASCTHPVLSGPAMERIDNSSIKELVVLNTIDLTGRPCSSKIKQMSVAHLLGEAIMRVHEHKSVSTLFD
Sequences:
>Translated_318_residues MSTVYEREIRLFSLNSNRPLAEEIAKEIGVPLSDCQVKRFSDGELYINIEESVRGDDVYVIQSTSSPVNETLMELLVMID ALKRASVRTINIVMPYYGYARQDRKARSREPITAKLVADLLTVAGATRVITMDLHAAQIQGFFNIPVDQLLGVPLISTYF ETEEFQAKDIVVVSPDHGGVTRARKLAERLKAPIAIIDKRRPKANVAEVMNIVGSVEGKTAILIDDIIDTAGTITLAADA IVEAGAKEVYASCTHPVLSGPAMERIDNSSIKELVVLNTIDLTGRPCSSKIKQMSVAHLLGEAIMRVHEHKSVSTLFD >Mature_317_residues STVYEREIRLFSLNSNRPLAEEIAKEIGVPLSDCQVKRFSDGELYINIEESVRGDDVYVIQSTSSPVNETLMELLVMIDA LKRASVRTINIVMPYYGYARQDRKARSREPITAKLVADLLTVAGATRVITMDLHAAQIQGFFNIPVDQLLGVPLISTYFE TEEFQAKDIVVVSPDHGGVTRARKLAERLKAPIAIIDKRRPKANVAEVMNIVGSVEGKTAILIDDIIDTAGTITLAADAI VEAGAKEVYASCTHPVLSGPAMERIDNSSIKELVVLNTIDLTGRPCSSKIKQMSVAHLLGEAIMRVHEHKSVSTLFD
Specific function: Utilized by both the de novo and the salvage pathways by which endogenously formed or exogenously added pyrimidine, purine, or pyridine bases are converted to the corresponding ribonucleoside monophosphates. [C]
COG id: COG0462
COG function: function code FE; Phosphoribosylpyrophosphate synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribose-phosphate pyrophosphokinase family [H]
Homologues:
Organism=Homo sapiens, GI4506129, Length=311, Percent_Identity=47.2668810289389, Blast_Score=285, Evalue=6e-77, Organism=Homo sapiens, GI4506127, Length=312, Percent_Identity=46.7948717948718, Blast_Score=284, Evalue=6e-77, Organism=Homo sapiens, GI28557709, Length=312, Percent_Identity=46.1538461538462, Blast_Score=283, Evalue=1e-76, Organism=Homo sapiens, GI84875539, Length=314, Percent_Identity=46.8152866242038, Blast_Score=279, Evalue=3e-75, Organism=Homo sapiens, GI4506133, Length=343, Percent_Identity=38.1924198250729, Blast_Score=191, Evalue=6e-49, Organism=Homo sapiens, GI194018537, Length=343, Percent_Identity=37.0262390670554, Blast_Score=180, Evalue=1e-45, Organism=Homo sapiens, GI310128524, Length=136, Percent_Identity=38.2352941176471, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI310115209, Length=136, Percent_Identity=38.2352941176471, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI310118259, Length=136, Percent_Identity=38.2352941176471, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI310119946, Length=136, Percent_Identity=38.2352941176471, Blast_Score=88, Evalue=1e-17, Organism=Escherichia coli, GI1787458, Length=314, Percent_Identity=48.7261146496815, Blast_Score=302, Evalue=1e-83, Organism=Caenorhabditis elegans, GI25149168, Length=311, Percent_Identity=49.1961414790997, Blast_Score=294, Evalue=3e-80, Organism=Caenorhabditis elegans, GI17554702, Length=311, Percent_Identity=49.1961414790997, Blast_Score=293, Evalue=6e-80, Organism=Caenorhabditis elegans, GI71989924, Length=311, Percent_Identity=49.1961414790997, Blast_Score=292, Evalue=2e-79, Organism=Caenorhabditis elegans, GI17554704, Length=309, Percent_Identity=49.1909385113269, Blast_Score=292, Evalue=2e-79, Organism=Caenorhabditis elegans, GI17570245, Length=336, Percent_Identity=33.9285714285714, Blast_Score=184, Evalue=5e-47, Organism=Saccharomyces cerevisiae, GI6320946, Length=323, Percent_Identity=46.1300309597523, Blast_Score=263, Evalue=2e-71, Organism=Saccharomyces cerevisiae, GI6319403, Length=313, Percent_Identity=46.0063897763578, Blast_Score=263, Evalue=3e-71, Organism=Saccharomyces cerevisiae, GI6321776, Length=316, Percent_Identity=45.253164556962, Blast_Score=256, Evalue=3e-69, Organism=Saccharomyces cerevisiae, GI6322667, Length=199, Percent_Identity=41.2060301507538, Blast_Score=163, Evalue=4e-41, Organism=Saccharomyces cerevisiae, GI6324511, Length=113, Percent_Identity=41.5929203539823, Blast_Score=82, Evalue=1e-16, Organism=Drosophila melanogaster, GI21355239, Length=312, Percent_Identity=48.3974358974359, Blast_Score=288, Evalue=4e-78, Organism=Drosophila melanogaster, GI45551540, Length=334, Percent_Identity=45.5089820359281, Blast_Score=276, Evalue=1e-74, Organism=Drosophila melanogaster, GI24651458, Length=362, Percent_Identity=33.4254143646409, Blast_Score=191, Evalue=4e-49, Organism=Drosophila melanogaster, GI24651456, Length=362, Percent_Identity=33.4254143646409, Blast_Score=191, Evalue=4e-49, Organism=Drosophila melanogaster, GI281362873, Length=362, Percent_Identity=33.4254143646409, Blast_Score=191, Evalue=5e-49, Organism=Drosophila melanogaster, GI24651454, Length=362, Percent_Identity=33.4254143646409, Blast_Score=191, Evalue=5e-49, Organism=Drosophila melanogaster, GI45552010, Length=383, Percent_Identity=30.2872062663185, Blast_Score=160, Evalue=1e-39, Organism=Drosophila melanogaster, GI24651462, Length=209, Percent_Identity=36.3636363636364, Blast_Score=139, Evalue=3e-33, Organism=Drosophila melanogaster, GI24651464, Length=209, Percent_Identity=36.3636363636364, Blast_Score=139, Evalue=3e-33,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000842 - InterPro: IPR005946 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.7.6.1 [H]
Molecular weight: Translated: 34919; Mature: 34788
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER ; PS00114 PRPP_SYNTHETASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTVYEREIRLFSLNSNRPLAEEIAKEIGVPLSDCQVKRFSDGELYINIEESVRGDDVYV CCCCEECCEEEEEECCCCCHHHHHHHHHCCCCCCCEEEEECCCEEEEEECCCCCCCEEEE IQSTSSPVNETLMELLVMIDALKRASVRTINIVMPYYGYARQDRKARSREPITAKLVADL EECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHH LTVAGATRVITMDLHAAQIQGFFNIPVDQLLGVPLISTYFETEEFQAKDIVVVSPDHGGV HHHCCCCEEEEEECHHHHHCCEECCCHHHHHCCHHHHHHHCCCCCCCCEEEEECCCCCCH TRARKLAERLKAPIAIIDKRRPKANVAEVMNIVGSVEGKTAILIDDIIDTAGTITLAADA HHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEHHHHCCCCCEEEHHHH IVEAGAKEVYASCTHPVLSGPAMERIDNSSIKELVVLNTIDLTGRPCSSKIKQMSVAHLL HHHCCHHHHHHHCCCCHHCCHHHHHCCCCCHHHEEEEEEECCCCCCHHHHHHHHHHHHHH GEAIMRVHEHKSVSTLFD HHHHHHHHHCCCHHHHCC >Mature Secondary Structure STVYEREIRLFSLNSNRPLAEEIAKEIGVPLSDCQVKRFSDGELYINIEESVRGDDVYV CCCEECCEEEEEECCCCCHHHHHHHHHCCCCCCCEEEEECCCEEEEEECCCCCCCEEEE IQSTSSPVNETLMELLVMIDALKRASVRTINIVMPYYGYARQDRKARSREPITAKLVADL EECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHH LTVAGATRVITMDLHAAQIQGFFNIPVDQLLGVPLISTYFETEEFQAKDIVVVSPDHGGV HHHCCCCEEEEEECHHHHHCCEECCCHHHHHCCHHHHHHHCCCCCCCCEEEEECCCCCCH TRARKLAERLKAPIAIIDKRRPKANVAEVMNIVGSVEGKTAILIDDIIDTAGTITLAADA HHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEHHHHCCCCCEEEHHHH IVEAGAKEVYASCTHPVLSGPAMERIDNSSIKELVVLNTIDLTGRPCSSKIKQMSVAHLL HHHCCHHHHHHHCCCCHHCCHHHHHCCCCCHHHEEEEEEECCCCCCHHHHHHHHHHHHHH GEAIMRVHEHKSVSTLFD HHHHHHHHHCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12721629 [H]