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The map label for this gene is rsiW [H]

Identifier: 229917319

GI number: 229917319

Start: 1546576

End: 1547211

Strand: Reverse

Name: rsiW [H]

Synonym: EAT1b_1594

Alternate gene names: 229917319

Gene position: 1547211-1546576 (Counterclockwise)

Preceding gene: 229917320

Following gene: 229917318

Centisome position: 51.58

GC content: 45.91

Gene sequence:

>636_bases
TTGACTCCTGAAGAAAAAGTACAACAATATTTGGAAGATGGCGTTTTGCCCGAAGAATCTGACGAATTGCGTCAATTGCT
AGAGGACGATGAATTATATGAATCGTATCTACAATATGAACGAATCGACGCAGAACTGAAAGCATTGCCTCGTCCAAAGT
TATCAGCAGATTTTACGGCTCGAGTGATGGCCGCTTTACCTGAAACTCCTGTACAGACAGCACCTGATCCCGTCGTACCG
TTTTCAAAACCAGTTCGAAAAGAACGCAAACCGCACTCGAAACAAATGCAATGGTTGCAACGGCATCCAGGTTTGATTGC
GGCCGTACTGTTCTTTAGTTTGATGTCTAGTGCGACACTCGGACTATGGAGCAGTGCTTCAGAGACGATGACCTATACAA
AAGTACCAGGTGTGATCGTATCCGAGAATGAAGTCATTGTCCCGGCCGGTGTCACGGTTGAAAAAGACATCACGGTCCAA
GGTGGCGATTTACGGATTGAAGGTACCGTCAATGGAGACGCGACAGCCGTCAATGGTCGTGCCTATTTGGCAAGTGCCGG
TCAAGTGACAGGTGAACTCGAACAGATCGATCAGATGTTCGAATGGATTTGGTATTCGATAAAACAACTTTTCTAA

Upstream 100 bases:

>100_bases
TCAGCGTGATGATCGACATGCCGGTCGCAACGGTTAAGACAAGGATCTTCCGGGGAAGAGAAATGTTAAAAACAATCTTT
CAAAATAGGGAGGGGTTCAA

Downstream 100 bases:

>100_bases
AGACGCTTCTGGCGTCTTTTTTTCGTTTCAATCTGGTTTCGTTTTGACGTGACGCAATGCGTATCTATAGAAATGATGAT
ATAATGGAATTTGCACGATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MTPEEKVQQYLEDGVLPEESDELRQLLEDDELYESYLQYERIDAELKALPRPKLSADFTARVMAALPETPVQTAPDPVVP
FSKPVRKERKPHSKQMQWLQRHPGLIAAVLFFSLMSSATLGLWSSASETMTYTKVPGVIVSENEVIVPAGVTVEKDITVQ
GGDLRIEGTVNGDATAVNGRAYLASAGQVTGELEQIDQMFEWIWYSIKQLF

Sequences:

>Translated_211_residues
MTPEEKVQQYLEDGVLPEESDELRQLLEDDELYESYLQYERIDAELKALPRPKLSADFTARVMAALPETPVQTAPDPVVP
FSKPVRKERKPHSKQMQWLQRHPGLIAAVLFFSLMSSATLGLWSSASETMTYTKVPGVIVSENEVIVPAGVTVEKDITVQ
GGDLRIEGTVNGDATAVNGRAYLASAGQVTGELEQIDQMFEWIWYSIKQLF
>Mature_210_residues
TPEEKVQQYLEDGVLPEESDELRQLLEDDELYESYLQYERIDAELKALPRPKLSADFTARVMAALPETPVQTAPDPVVPF
SKPVRKERKPHSKQMQWLQRHPGLIAAVLFFSLMSSATLGLWSSASETMTYTKVPGVIVSENEVIVPAGVTVEKDITVQG
GDLRIEGTVNGDATAVNGRAYLASAGQVTGELEQIDQMFEWIWYSIKQLF

Specific function: Is the anti-sigma factor for sigW. The presence of rsiW leads to the inactivation of sigW, and its proteolytic destruction to sigma-W activation [H]

COG id: COG5662

COG function: function code K; Predicted transmembrane transcriptional regulator (anti-sigma factor)

Gene ontology:

Cell location: Membrane; Single-pass membrane protein. Note=Site-2 clipped rsiW is released from the membrane to the cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the anti-sigma-W factor family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23587; Mature: 23456

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPEEKVQQYLEDGVLPEESDELRQLLEDDELYESYLQYERIDAELKALPRPKLSADFTA
CCCHHHHHHHHHCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
RVMAALPETPVQTAPDPVVPFSKPVRKERKPHSKQMQWLQRHPGLIAAVLFFSLMSSATL
HHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
GLWSSASETMTYTKVPGVIVSENEVIVPAGVTVEKDITVQGGDLRIEGTVNGDATAVNGR
HHCCCCCCCEEEEECCCEEECCCCEEEECCCEEECCEEEECCCEEEEEECCCCCEEECCC
AYLASAGQVTGELEQIDQMFEWIWYSIKQLF
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
TPEEKVQQYLEDGVLPEESDELRQLLEDDELYESYLQYERIDAELKALPRPKLSADFTA
CCHHHHHHHHHCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
RVMAALPETPVQTAPDPVVPFSKPVRKERKPHSKQMQWLQRHPGLIAAVLFFSLMSSATL
HHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
GLWSSASETMTYTKVPGVIVSENEVIVPAGVTVEKDITVQGGDLRIEGTVNGDATAVNGR
HHCCCCCCCEEEEECCCEEECCCCEEEECCCEEECCEEEECCCEEEEEECCCCCEEECCC
AYLASAGQVTGELEQIDQMFEWIWYSIKQLF
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA