Click here to switch to the map view.

The map label for this gene is yebA [C]

Identifier: 229917276

GI number: 229917276

Start: 1510674

End: 1511657

Strand: Reverse

Name: yebA [C]

Synonym: EAT1b_1551

Alternate gene names: 229917276

Gene position: 1511657-1510674 (Counterclockwise)

Preceding gene: 229917277

Following gene: 229917274

Centisome position: 50.39

GC content: 47.36

Gene sequence:

>984_bases
ATGTGGAAACAACTCATCATGACAGCGGGTGTTGGTGTTCTCTTATTCCAAGGACAAACCGCATCTGCCGACAACATGTC
CCCGCAAGATCTCGTTCAAACGGAAAAGTCATTGCAACAAACGAAACAGCAAGTAAAAGATACGAAGCAGTCCATTCAAG
CCATTCAAACAAAGTTGAAGCAAGTCGACCATAAAGCGGAGGCATTGCGAGACAAAATTGAAGGGACTTCTAGAGAATTA
GAAGAAGTGGAAGAGTCGCTCGTTCCGGCAGAACAGTCACTCTTCGCAAAAGTCGTTTCTTCGGTGTTGCCGAGTGCGAA
AGCTGAGGCCGCTGAAGCGGAAGAAGCGCATCAAGAGCTTGTTGAAAAGAAAAACCAAGCAAACGAAGTATTGAAGCAAC
TAAAAGAAGAGCAAGAGCAAATTGAAGCGACACGTCAAGACGTGAAAGCGTCGTATGACGAAAAGTCGAAACAATATAAG
AAACAAACGAATCAGTTGAGTGACTTGAAGAAACAGTATGAAGCGATGGCACCCGATCGGTTCTTAATGCCGGCGGAAGG
TCGCCTCTCTCAAGGATTCGGTTCGGCGAGTGGGCAGTTCGGATACACATTCCATAACGGTCTCGATATCGCCGCCAAAA
CAGGCACACCTATATACGCCGCAGAAGCTGGAAAAGTGACAAAAGTCAGCTCTAGTGGACCTTATGGAAACCATATACAA
ATCGAACACAACGTAGACGGTCAAAAATGGACGACCGTGTATGCACACTTGCACAAAGTAGATGTCAAGACAGGTCAGTC
GGTGCGCCAAGGCGAACCAATTGGTCAAATCGGAAACACGGGCAACTCGTCTGGTCCGCACTTACACTTTGAGATTCATA
AAGGGGACTACAATTTCTCTGCTAGTTCAGCTGGGAATGCCGTCGACCCGATGAAACTGGCAGAGCGCCTCGGTGGTGCT
TCTCCGGTAAAAGCCACGTTTTAA

Upstream 100 bases:

>100_bases
AAACTTCATATATTGAAATTTTTAACCCCCAGTGGTATATTCGCACATGTAGCTTTTTTGAAGTTCATGAATGTATCAAT
TTGGAGGGTTTATTATATAT

Downstream 100 bases:

>100_bases
GCAGACAGATGCCCTGAGCCTCTCGAATGAGGTCAGGGCATCTTTTATTGTTCCCGCGTCGGATCGTGGTTGCCTTCGCT
GTCGGCAATCGTATCTGAGC

Product: peptidase M23

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MWKQLIMTAGVGVLLFQGQTASADNMSPQDLVQTEKSLQQTKQQVKDTKQSIQAIQTKLKQVDHKAEALRDKIEGTSREL
EEVEESLVPAEQSLFAKVVSSVLPSAKAEAAEAEEAHQELVEKKNQANEVLKQLKEEQEQIEATRQDVKASYDEKSKQYK
KQTNQLSDLKKQYEAMAPDRFLMPAEGRLSQGFGSASGQFGYTFHNGLDIAAKTGTPIYAAEAGKVTKVSSSGPYGNHIQ
IEHNVDGQKWTTVYAHLHKVDVKTGQSVRQGEPIGQIGNTGNSSGPHLHFEIHKGDYNFSASSAGNAVDPMKLAERLGGA
SPVKATF

Sequences:

>Translated_327_residues
MWKQLIMTAGVGVLLFQGQTASADNMSPQDLVQTEKSLQQTKQQVKDTKQSIQAIQTKLKQVDHKAEALRDKIEGTSREL
EEVEESLVPAEQSLFAKVVSSVLPSAKAEAAEAEEAHQELVEKKNQANEVLKQLKEEQEQIEATRQDVKASYDEKSKQYK
KQTNQLSDLKKQYEAMAPDRFLMPAEGRLSQGFGSASGQFGYTFHNGLDIAAKTGTPIYAAEAGKVTKVSSSGPYGNHIQ
IEHNVDGQKWTTVYAHLHKVDVKTGQSVRQGEPIGQIGNTGNSSGPHLHFEIHKGDYNFSASSAGNAVDPMKLAERLGGA
SPVKATF
>Mature_327_residues
MWKQLIMTAGVGVLLFQGQTASADNMSPQDLVQTEKSLQQTKQQVKDTKQSIQAIQTKLKQVDHKAEALRDKIEGTSREL
EEVEESLVPAEQSLFAKVVSSVLPSAKAEAAEAEEAHQELVEKKNQANEVLKQLKEEQEQIEATRQDVKASYDEKSKQYK
KQTNQLSDLKKQYEAMAPDRFLMPAEGRLSQGFGSASGQFGYTFHNGLDIAAKTGTPIYAAEAGKVTKVSSSGPYGNHIQ
IEHNVDGQKWTTVYAHLHKVDVKTGQSVRQGEPIGQIGNTGNSSGPHLHFEIHKGDYNFSASSAGNAVDPMKLAERLGGA
SPVKATF

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=88, Percent_Identity=44.3181818181818, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI87082174, Length=145, Percent_Identity=35.1724137931034, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 35765; Mature: 35765

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWKQLIMTAGVGVLLFQGQTASADNMSPQDLVQTEKSLQQTKQQVKDTKQSIQAIQTKLK
CHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVDHKAEALRDKIEGTSRELEEVEESLVPAEQSLFAKVVSSVLPSAKAEAAEAEEAHQEL
HHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
VEKKNQANEVLKQLKEEQEQIEATRQDVKASYDEKSKQYKKQTNQLSDLKKQYEAMAPDR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FLMPAEGRLSQGFGSASGQFGYTFHNGLDIAAKTGTPIYAAEAGKVTKVSSSGPYGNHIQ
EECCCCCCHHCCCCCCCCCCCEEEECCCEEEECCCCCEEEECCCCEEEECCCCCCCCEEE
IEHNVDGQKWTTVYAHLHKVDVKTGQSVRQGEPIGQIGNTGNSSGPHLHFEIHKGDYNFS
EEECCCCCHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCC
ASSAGNAVDPMKLAERLGGASPVKATF
CCCCCCCCCHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MWKQLIMTAGVGVLLFQGQTASADNMSPQDLVQTEKSLQQTKQQVKDTKQSIQAIQTKLK
CHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVDHKAEALRDKIEGTSRELEEVEESLVPAEQSLFAKVVSSVLPSAKAEAAEAEEAHQEL
HHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
VEKKNQANEVLKQLKEEQEQIEATRQDVKASYDEKSKQYKKQTNQLSDLKKQYEAMAPDR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FLMPAEGRLSQGFGSASGQFGYTFHNGLDIAAKTGTPIYAAEAGKVTKVSSSGPYGNHIQ
EECCCCCCHHCCCCCCCCCCCEEEECCCEEEECCCCCEEEECCCCEEEECCCCCCCCEEE
IEHNVDGQKWTTVYAHLHKVDVKTGQSVRQGEPIGQIGNTGNSSGPHLHFEIHKGDYNFS
EEECCCCCHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCC
ASSAGNAVDPMKLAERLGGASPVKATF
CCCCCCCCCHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]