| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is yteA [H]
Identifier: 229917275
GI number: 229917275
Start: 1510078
End: 1510629
Strand: Direct
Name: yteA [H]
Synonym: EAT1b_1550
Alternate gene names: 229917275
Gene position: 1510078-1510629 (Clockwise)
Preceding gene: 229917270
Following gene: 229917279
Centisome position: 50.34
GC content: 48.91
Gene sequence:
>552_bases ATGGATATGTTGACTGAAGAGCAAATCGAAACGTTTAAAAAACGATTATTGAAAGAAAAAGCAAAGACCGAAGGATATAT GGATAGTCGAGAAGAGACGTATGACGAAGGAGAGCTCTCTCATTACGACAACCACCCTGCCGACTCGGGCGAAGAGCTCT TTTTACGGGAACGGGACCAAGCCCTTAACGAACTCGATGAAGAGTTCTTGAGTGACGTCGATAAGGCGCTACTCGCTATT CAGAATGGGACGTATGGAAAATGTGAAGTGTGCGGGAAAGACATTGAACTAGACCGTCTTGAAGTCATTCCAGAAGCCAC CCTTTGCATCGAACACGCCCGGGCACAAGAAGAGGAAGAACACGCACATGAGCTCGATCGACCGGTCGAAGAAGACGTGT TGAATCCAAATGAGACCGCCCGACGCAAAGAGTTAGACGGGACGGATCAACCTGGTCAAAAAACGGACGCCTTCTCCCAA GTAGAAGACTACGGAAGCTCAGATACGATTGCCGACAGCGAAGGCAACCACGATCCGACGCGGGAACAATAA
Upstream 100 bases:
>100_bases CTTTCTAAACATTGCTCGACATGAGGGATTCCACTTCAAAAGGTTTGTACACAAATAAAATGGGAAACCTTATATTAATG ACTTGAGAACTGGAGAGTGA
Downstream 100 bases:
>100_bases AAGATGCCCTGACCTCATTCGAGAGGCTCAGGGCATCTGTCTGCTTAAAACGTGGCTTTTACCGGAGAAGCACCACCGAG GCGCTCTGCCAGTTTCATCG
Product: TraR/DksA family transcriptional regulator
Products: NA
Alternate protein names: ORFQ [H]
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MDMLTEEQIETFKKRLLKEKAKTEGYMDSREETYDEGELSHYDNHPADSGEELFLRERDQALNELDEEFLSDVDKALLAI QNGTYGKCEVCGKDIELDRLEVIPEATLCIEHARAQEEEEHAHELDRPVEEDVLNPNETARRKELDGTDQPGQKTDAFSQ VEDYGSSDTIADSEGNHDPTREQ
Sequences:
>Translated_183_residues MDMLTEEQIETFKKRLLKEKAKTEGYMDSREETYDEGELSHYDNHPADSGEELFLRERDQALNELDEEFLSDVDKALLAI QNGTYGKCEVCGKDIELDRLEVIPEATLCIEHARAQEEEEHAHELDRPVEEDVLNPNETARRKELDGTDQPGQKTDAFSQ VEDYGSSDTIADSEGNHDPTREQ >Mature_183_residues MDMLTEEQIETFKKRLLKEKAKTEGYMDSREETYDEGELSHYDNHPADSGEELFLRERDQALNELDEEFLSDVDKALLAI QNGTYGKCEVCGKDIELDRLEVIPEATLCIEHARAQEEEEHAHELDRPVEEDVLNPNETARRKELDGTDQPGQKTDAFSQ VEDYGSSDTIADSEGNHDPTREQ
Specific function: Unknown
COG id: COG1734
COG function: function code T; DnaK suppressor protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 dksA C4-type zinc finger [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014240 - InterPro: IPR000962 [H]
Pfam domain/function: PF01258 zf-dskA_traR [H]
EC number: NA
Molecular weight: Translated: 20948; Mature: 20948
Theoretical pI: Translated: 4.03; Mature: 4.03
Prosite motif: PS51128 ZF_DKSA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDMLTEEQIETFKKRLLKEKAKTEGYMDSREETYDEGELSHYDNHPADSGEELFLRERDQ CCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH ALNELDEEFLSDVDKALLAIQNGTYGKCEVCGKDIELDRLEVIPEATLCIEHARAQEEEE HHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHH HAHELDRPVEEDVLNPNETARRKELDGTDQPGQKTDAFSQVEDYGSSDTIADSEGNHDPT HHHHHCCCHHHHCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC REQ CCC >Mature Secondary Structure MDMLTEEQIETFKKRLLKEKAKTEGYMDSREETYDEGELSHYDNHPADSGEELFLRERDQ CCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH ALNELDEEFLSDVDKALLAIQNGTYGKCEVCGKDIELDRLEVIPEATLCIEHARAQEEEE HHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHH HAHELDRPVEEDVLNPNETARRKELDGTDQPGQKTDAFSQVEDYGSSDTIADSEGNHDPT HHHHHCCCHHHHCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC REQ CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377; 10568751 [H]