| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229917269
Identifier: 229917269
GI number: 229917269
Start: 1506000
End: 1507265
Strand: Direct
Name: 229917269
Synonym: EAT1b_1544
Alternate gene names: NA
Gene position: 1506000-1507265 (Clockwise)
Preceding gene: 229917268
Following gene: 229917270
Centisome position: 50.2
GC content: 44.63
Gene sequence:
>1266_bases GTGAAAAAGTACCTGATTTTCAGTACCCTCGTCATCCTGTTTTTCTTATTCGGATGCGAGGAAGAACGCGCACTCCGACT CCAACCCGCTCCTGAATATTATCAAGGACGTGCCCTGTTACCAAACGGACAACAAATTGAAATACCCGAATCGGATCGTG CAGCGATTATCGAGTTATGTCAGCCTGACAACGCGATTCAAAAGATTCCAAGTGGTGAAAGACGTTGGCTCGGGACGGTC ACATTGAACCAACCGTTGACTGATGCCGCCACCGAATCCACTTTTCCAACCGCAACTTTTTTCACTGTCGAAAATAAATC ATATGTCCAATGTCAACTTGATTCCATCACATATGCCACCGAGATTAACACGCTTCCCGAGAGCTTAAACGATGTTCAAT ATACGGCAGAACCTTATCCGGATGTTCCGAAATTCAGATTTGCTGAGCCTCATGAATATGAGCACTTCGCACAAGAGATG AAAAAGCCGATAGGTAATGAGCCCTATCCAGAACGAAAAGGGATCGAGCATACGCTTTTCCATATCACGATGCCTTTCAG CGGTGAATTTGAACTGACCTTTACATCATCTGAAAATAAAGACCGCCTCGTGATTCCTGTCGAATCAACACGGCATCCTT ATTTGTCACTCGGGCTCGGGACAGAAAAGTCTGATGAGGTGTTACAATATGCGATTTATACGAGTCGAGATCAAAATGAC TATCAAGAAGTATTGCGACCGAAAGCAGCGCATATTTCGCAGATGTTTGGCGCAAAAACGGCTCCGCAACTCCCTTCGGT TCTTGTGCCGGGTCACGAGTATCCACTCTACAGTTTTACGTTCATGAAAAATGGAACGGCCCATCGTCAGAACGTCTCCT TGACGTATCATGAACCCAAGTTGTTGTATGGAAAAGAATTGAGTGAACAAATTCACGATAAATTAAGTAGTCAGCGTCAT GTCATTTTTCATGACTTGGCACTCCTTGGGACGGAATCAAAAGATGCTTCCTTCCTACAACATGTCGGTCAAAATGAAAT GGACTTTATTTTCGATGCCATTAAACGAGCCAATGCGACTGCCTATGCGGGAGAGCCCGCTCCTACACCTTATGTGACTC TATTTCAAGGGATATGCGCGCAAACGTTTGACGTTAGCTATGATGGCGTAGATGTGTACGTGACCAACTCAAAAACAGGT GCCCATTTTAAGCTATTACGTGAGGATGCCATCAAGTGGTATAACCTGTTTGAACAAAACACATAA
Upstream 100 bases:
>100_bases TGATTTTTTTTCGAAATAACAAATTAATTTTCCTAAGACTAAAGTCACAAAAAAATGGTGCTAGAATGGTGAAAGCGATT CATTGAAGGAGAGTACCGAT
Downstream 100 bases:
>100_bases TCTGACAGATGCGAACGCATCTGTCTTTTTGCATCTTCATGAGGCAAATATAGTTCGATCGGACATCTTTTTTGGGAAGA TAAGAAGGGAAAGGAGTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 421; Mature: 421
Protein sequence:
>421_residues MKKYLIFSTLVILFFLFGCEEERALRLQPAPEYYQGRALLPNGQQIEIPESDRAAIIELCQPDNAIQKIPSGERRWLGTV TLNQPLTDAATESTFPTATFFTVENKSYVQCQLDSITYATEINTLPESLNDVQYTAEPYPDVPKFRFAEPHEYEHFAQEM KKPIGNEPYPERKGIEHTLFHITMPFSGEFELTFTSSENKDRLVIPVESTRHPYLSLGLGTEKSDEVLQYAIYTSRDQND YQEVLRPKAAHISQMFGAKTAPQLPSVLVPGHEYPLYSFTFMKNGTAHRQNVSLTYHEPKLLYGKELSEQIHDKLSSQRH VIFHDLALLGTESKDASFLQHVGQNEMDFIFDAIKRANATAYAGEPAPTPYVTLFQGICAQTFDVSYDGVDVYVTNSKTG AHFKLLREDAIKWYNLFEQNT
Sequences:
>Translated_421_residues MKKYLIFSTLVILFFLFGCEEERALRLQPAPEYYQGRALLPNGQQIEIPESDRAAIIELCQPDNAIQKIPSGERRWLGTV TLNQPLTDAATESTFPTATFFTVENKSYVQCQLDSITYATEINTLPESLNDVQYTAEPYPDVPKFRFAEPHEYEHFAQEM KKPIGNEPYPERKGIEHTLFHITMPFSGEFELTFTSSENKDRLVIPVESTRHPYLSLGLGTEKSDEVLQYAIYTSRDQND YQEVLRPKAAHISQMFGAKTAPQLPSVLVPGHEYPLYSFTFMKNGTAHRQNVSLTYHEPKLLYGKELSEQIHDKLSSQRH VIFHDLALLGTESKDASFLQHVGQNEMDFIFDAIKRANATAYAGEPAPTPYVTLFQGICAQTFDVSYDGVDVYVTNSKTG AHFKLLREDAIKWYNLFEQNT >Mature_421_residues MKKYLIFSTLVILFFLFGCEEERALRLQPAPEYYQGRALLPNGQQIEIPESDRAAIIELCQPDNAIQKIPSGERRWLGTV TLNQPLTDAATESTFPTATFFTVENKSYVQCQLDSITYATEINTLPESLNDVQYTAEPYPDVPKFRFAEPHEYEHFAQEM KKPIGNEPYPERKGIEHTLFHITMPFSGEFELTFTSSENKDRLVIPVESTRHPYLSLGLGTEKSDEVLQYAIYTSRDQND YQEVLRPKAAHISQMFGAKTAPQLPSVLVPGHEYPLYSFTFMKNGTAHRQNVSLTYHEPKLLYGKELSEQIHDKLSSQRH VIFHDLALLGTESKDASFLQHVGQNEMDFIFDAIKRANATAYAGEPAPTPYVTLFQGICAQTFDVSYDGVDVYVTNSKTG AHFKLLREDAIKWYNLFEQNT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47996; Mature: 47996
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKYLIFSTLVILFFLFGCEEERALRLQPAPEYYQGRALLPNGQQIEIPESDRAAIIELC CCCCHHHHHHHHHHHHHCCCCCCEEEECCCCHHHCCCEECCCCCEEECCCCCCCEEEEEC QPDNAIQKIPSGERRWLGTVTLNQPLTDAATESTFPTATFFTVENKSYVQCQLDSITYAT CCCHHHHHCCCCCCEEEEEEEECCCCCHHHCCCCCCCEEEEEECCCCEEEEEECCEEEEE EINTLPESLNDVQYTAEPYPDVPKFRFAEPHEYEHFAQEMKKPIGNEPYPERKGIEHTLF ECCHHHHHHCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEE HITMPFSGEFELTFTSSENKDRLVIPVESTRHPYLSLGLGTEKSDEVLQYAIYTSRDQND EEECCCCCEEEEEEECCCCCCEEEEEECCCCCCEEEEECCCCCHHHHEEEEEECCCCCHH YQEVLRPKAAHISQMFGAKTAPQLPSVLVPGHEYPLYSFTFMKNGTAHRQNVSLTYHEPK HHHHHCCHHHHHHHHHCCCCCCCCCCEEECCCCCCCEEEEEEECCCCCCCEEEEEECCCC LLYGKELSEQIHDKLSSQRHVIFHDLALLGTESKDASFLQHVGQNEMDFIFDAIKRANAT EEHHHHHHHHHHHHHCCCCEEEEEEHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCC AYAGEPAPTPYVTLFQGICAQTFDVSYDGVDVYVTNSKTGAHFKLLREDAIKWYNLFEQN EECCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCC T C >Mature Secondary Structure MKKYLIFSTLVILFFLFGCEEERALRLQPAPEYYQGRALLPNGQQIEIPESDRAAIIELC CCCCHHHHHHHHHHHHHCCCCCCEEEECCCCHHHCCCEECCCCCEEECCCCCCCEEEEEC QPDNAIQKIPSGERRWLGTVTLNQPLTDAATESTFPTATFFTVENKSYVQCQLDSITYAT CCCHHHHHCCCCCCEEEEEEEECCCCCHHHCCCCCCCEEEEEECCCCEEEEEECCEEEEE EINTLPESLNDVQYTAEPYPDVPKFRFAEPHEYEHFAQEMKKPIGNEPYPERKGIEHTLF ECCHHHHHHCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEE HITMPFSGEFELTFTSSENKDRLVIPVESTRHPYLSLGLGTEKSDEVLQYAIYTSRDQND EEECCCCCEEEEEEECCCCCCEEEEEECCCCCCEEEEECCCCCHHHHEEEEEECCCCCHH YQEVLRPKAAHISQMFGAKTAPQLPSVLVPGHEYPLYSFTFMKNGTAHRQNVSLTYHEPK HHHHHCCHHHHHHHHHCCCCCCCCCCEEECCCCCCCEEEEEEECCCCCCCEEEEEECCCC LLYGKELSEQIHDKLSSQRHVIFHDLALLGTESKDASFLQHVGQNEMDFIFDAIKRANAT EEHHHHHHHHHHHHHCCCCEEEEEEHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCC AYAGEPAPTPYVTLFQGICAQTFDVSYDGVDVYVTNSKTGAHFKLLREDAIKWYNLFEQN EECCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCC T C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA