| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229917235
Identifier: 229917235
GI number: 229917235
Start: 1478868
End: 1480007
Strand: Direct
Name: 229917235
Synonym: EAT1b_1510
Alternate gene names: NA
Gene position: 1478868-1480007 (Clockwise)
Preceding gene: 229917234
Following gene: 229917236
Centisome position: 49.3
GC content: 51.14
Gene sequence:
>1140_bases ATGAAACCCACTTTATTGTGTTTATCTTGGCGAGACATCAAACATCCGAAAGCAGGAGGGGCTGAAGTATTCACGCATGA GATGCTCGCTTACGTGGCCCCTCGTTATAACATTATTCATCTGTCCCCTCATATCGACGGACGTGAGGACGAGGAATGGA TTGATGGCGTTCGTTATATTCGCTCGGGTACAGACATGACGAGCATCGTAGAGGCAAGGCGCTACTACAAAGTGCACGAG GATGAAATCGATCTCGTCCTCGATCAGATGAATACACACCATTACTTCACACCTTTCTATGTCCCTGCACACAAACGCAT TCTCTTCATCCATCAATTGACGCGTGAGATTTGGCGCATCAACCTTCCTCCTCCCGTCTCATGGGTCGGGGCATGGACGG AAACGAGCCGTCTGCGTCTCTATCGGCAAAACGACGTCTTGACCGTCAGTCAGTCGACGGCAGATGATCTCGTCGCCGTC GGAATTCCAGAGTCGCATATCACAATTTTGCCAGAAGGACTCAACTTCACACCGTGGCTAGAAGAAGAATGGTTTGAGAA AGAAGAGCATCCTACATTCTTATATGTCGGACGCATGTCCGCCTATAAAGGAATCAACGATGCCGTCAAAGCGTTCGTTT CCATCAAGCGCGACTTCCCGACCGCACAACTGTGGATCATCGGGAAGAAGAATGAGGCGTATATCGCTGAACAACTGAAC CCGATCACACCTGAGGATGTGCGTTCGGACATCCATTATTTTGGCTTTGTGAGTGAAGAAGAGAAACTCGAGCGGATGAG TCGAGCGACAGCCCTTCTCTTTCCATCCCGTCGAGAAGGATGGGGCTTGACTGTCAGTGAGGCCGCCGCTGTCGGTACAC CGACCATCGTCTACGATGCGCCGGGACTTCGGGACGCGGTTCAGTACGGAAAACTCGGTTACATGACGATGGCACAAACC GCAGAGGCGCTCGCGCTCGAGATGAGACGCTGTTTAAACGACCCGACTCACTATGAAACGGTGCGACGCGATGCCCATAC GTTTTCCAAAACGTTGCAGTGGAGTCGTACTGGCGCTGCATTCGAACAATGGTTGACCGATAAACTCGGAATCTTGATTC AGGAAGGGAGAACATCATGA
Upstream 100 bases:
>100_bases TGTGGCTCTTCGCTCAGGCGGTCGTTTTACTCGGAGGCTCGCTACTTCTTCGTTTCCGCTTCCACTCTGAGCGACGTCGA CATTTAAAGGAGGAATCGTG
Downstream 100 bases:
>100_bases TTGGAATCGCGATGTCTACGTATTGTAACGAGGAAATCATTCGGGAAACGATTCAGTCCATCCAACAGCAAACGGCCGAA TTCGTCTGCGTGATTGCGGA
Product: glycosyl transferase group 1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MKPTLLCLSWRDIKHPKAGGAEVFTHEMLAYVAPRYNIIHLSPHIDGREDEEWIDGVRYIRSGTDMTSIVEARRYYKVHE DEIDLVLDQMNTHHYFTPFYVPAHKRILFIHQLTREIWRINLPPPVSWVGAWTETSRLRLYRQNDVLTVSQSTADDLVAV GIPESHITILPEGLNFTPWLEEEWFEKEEHPTFLYVGRMSAYKGINDAVKAFVSIKRDFPTAQLWIIGKKNEAYIAEQLN PITPEDVRSDIHYFGFVSEEEKLERMSRATALLFPSRREGWGLTVSEAAAVGTPTIVYDAPGLRDAVQYGKLGYMTMAQT AEALALEMRRCLNDPTHYETVRRDAHTFSKTLQWSRTGAAFEQWLTDKLGILIQEGRTS
Sequences:
>Translated_379_residues MKPTLLCLSWRDIKHPKAGGAEVFTHEMLAYVAPRYNIIHLSPHIDGREDEEWIDGVRYIRSGTDMTSIVEARRYYKVHE DEIDLVLDQMNTHHYFTPFYVPAHKRILFIHQLTREIWRINLPPPVSWVGAWTETSRLRLYRQNDVLTVSQSTADDLVAV GIPESHITILPEGLNFTPWLEEEWFEKEEHPTFLYVGRMSAYKGINDAVKAFVSIKRDFPTAQLWIIGKKNEAYIAEQLN PITPEDVRSDIHYFGFVSEEEKLERMSRATALLFPSRREGWGLTVSEAAAVGTPTIVYDAPGLRDAVQYGKLGYMTMAQT AEALALEMRRCLNDPTHYETVRRDAHTFSKTLQWSRTGAAFEQWLTDKLGILIQEGRTS >Mature_379_residues MKPTLLCLSWRDIKHPKAGGAEVFTHEMLAYVAPRYNIIHLSPHIDGREDEEWIDGVRYIRSGTDMTSIVEARRYYKVHE DEIDLVLDQMNTHHYFTPFYVPAHKRILFIHQLTREIWRINLPPPVSWVGAWTETSRLRLYRQNDVLTVSQSTADDLVAV GIPESHITILPEGLNFTPWLEEEWFEKEEHPTFLYVGRMSAYKGINDAVKAFVSIKRDFPTAQLWIIGKKNEAYIAEQLN PITPEDVRSDIHYFGFVSEEEKLERMSRATALLFPSRREGWGLTVSEAAAVGTPTIVYDAPGLRDAVQYGKLGYMTMAQT AEALALEMRRCLNDPTHYETVRRDAHTFSKTLQWSRTGAAFEQWLTDKLGILIQEGRTS
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 - InterPro: IPR013534 [H]
Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 43686; Mature: 43686
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPTLLCLSWRDIKHPKAGGAEVFTHEMLAYVAPRYNIIHLSPHIDGREDEEWIDGVRYI CCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHH RSGTDMTSIVEARRYYKVHEDEIDLVLDQMNTHHYFTPFYVPAHKRILFIHQLTREIWRI HCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEECCEEECCCHHHHHHHHHHHHHEEE NLPPPVSWVGAWTETSRLRLYRQNDVLTVSQSTADDLVAVGIPESHITILPEGLNFTPWL CCCCCCCEEECCCCCCEEEEEECCCEEEEECCCCCCEEEECCCCCCEEEEECCCCCCCCC EEEWFEKEEHPTFLYVGRMSAYKGINDAVKAFVSIKRDFPTAQLWIIGKKNEAYIAEQLN CHHHHCCCCCCCEEEEECHHHHCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHCC PITPEDVRSDIHYFGFVSEEEKLERMSRATALLFPSRREGWGLTVSEAAAVGTPTIVYDA CCCHHHHHCCHHHEEECCHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHCCCCEEEECC PGLRDAVQYGKLGYMTMAQTAEALALEMRRCLNDPTHYETVRRDAHTFSKTLQWSRTGAA CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHH FEQWLTDKLGILIQEGRTS HHHHHHHHHCEEEECCCCC >Mature Secondary Structure MKPTLLCLSWRDIKHPKAGGAEVFTHEMLAYVAPRYNIIHLSPHIDGREDEEWIDGVRYI CCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHH RSGTDMTSIVEARRYYKVHEDEIDLVLDQMNTHHYFTPFYVPAHKRILFIHQLTREIWRI HCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEECCEEECCCHHHHHHHHHHHHHEEE NLPPPVSWVGAWTETSRLRLYRQNDVLTVSQSTADDLVAVGIPESHITILPEGLNFTPWL CCCCCCCEEECCCCCCEEEEEECCCEEEEECCCCCCEEEECCCCCCEEEEECCCCCCCCC EEEWFEKEEHPTFLYVGRMSAYKGINDAVKAFVSIKRDFPTAQLWIIGKKNEAYIAEQLN CHHHHCCCCCCCEEEEECHHHHCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHCC PITPEDVRSDIHYFGFVSEEEKLERMSRATALLFPSRREGWGLTVSEAAAVGTPTIVYDA CCCHHHHHCCHHHEEECCHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHCCCCEEEECC PGLRDAVQYGKLGYMTMAQTAEALALEMRRCLNDPTHYETVRRDAHTFSKTLQWSRTGAA CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHH FEQWLTDKLGILIQEGRTS HHHHHHHHHCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]