| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is mviM [H]
Identifier: 229917222
GI number: 229917222
Start: 1462852
End: 1463757
Strand: Direct
Name: mviM [H]
Synonym: EAT1b_1497
Alternate gene names: 229917222
Gene position: 1462852-1463757 (Clockwise)
Preceding gene: 229917221
Following gene: 229917223
Centisome position: 48.76
GC content: 49.34
Gene sequence:
>906_bases ATGCAAAAACCAAAAATCGGTATTGTCGGACTTGGAAATATCGCTCAAAAAGCGTATTTACCCATCCTTTCGATTCATCC CCGAATCGAGGTAGTCGGTGCCTTTTCCCCGAACACATCTAAGCGAGACATGATTTGCCAAACGTATCGAATGACCTCGT TCGACACGTTGAATGAACTCGCCTCATCCATCGATGCAGCGTTCGTACATAGTTCAACGGAAACTCATTATGACATCGTA TTGTATTTATTAGAACACGGCGTCGATGTTTATGTTGATAAGCCCCTCGCCGCAACAATCGAGGAAGCGGAGCAGCTCGT CATTCAAGCCGAACGTCTTGGGCGTAAATTGATGGTCGGGTTCAATCGACGTTTCGCTCCGATGTATATGCGTCTACAAA ACGAGTCCTCTGCTCACATGATTGATGTGGTAAAACATCGCGAGAATGACGTCGGCCCTAAGGATGCGACCTTCACCTTA CTCGATGATTACTTACATGTCATTGATACGCTACGTTTCCTCGCTGGTAATAAGCTAACACTCGTCTCGGGTCACGTCGA CGTCAATGAAAAGCATGAGCTTCGATTCGCCCGCCACGTGTGGCAAGATGAGCACGGAATGCACACGACATCGATGCATC GCACGTCCGGAGTGAACCATGAGCACGTCTCGATCGTCCGGGATGGCGAACGATTGTCTGTCGAAGAGATGGTCACGCTG CATCGTTTCAAGCAAGGTCGGCATGAGGTCGAAACGTTCGGTTCATGGGACACGACACTCGTGCAACGAGGATTCCAAGG CGCGATTGACCACTTCATTTCCGCACTCATCGAGGATACACCCATTCAAACAGACGGTCGTGCTGCGCTAGAAACGCAGC GGCTTGTTTCGAAGTTATTCGCATAA
Upstream 100 bases:
>100_bases GCCACAAGGTGAAATCGTCTTAAGTGCTAGTCTTTAATTCCTGAACCGGACACATCCGCTGTCCGGTTTTTTGTTATGAT GAACCAAAGGAGTGAATGGG
Downstream 100 bases:
>100_bases AGGAGGAGTATGTGTGGTTTATATCATGGTCATGGTCATTGTTGTCGCCGCAATCGGTTCAGATACAATCATCAAGATGA AGAAAACAAGTGTCGAAGAA
Product: oxidoreductase domain protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MQKPKIGIVGLGNIAQKAYLPILSIHPRIEVVGAFSPNTSKRDMICQTYRMTSFDTLNELASSIDAAFVHSSTETHYDIV LYLLEHGVDVYVDKPLAATIEEAEQLVIQAERLGRKLMVGFNRRFAPMYMRLQNESSAHMIDVVKHRENDVGPKDATFTL LDDYLHVIDTLRFLAGNKLTLVSGHVDVNEKHELRFARHVWQDEHGMHTTSMHRTSGVNHEHVSIVRDGERLSVEEMVTL HRFKQGRHEVETFGSWDTTLVQRGFQGAIDHFISALIEDTPIQTDGRAALETQRLVSKLFA
Sequences:
>Translated_301_residues MQKPKIGIVGLGNIAQKAYLPILSIHPRIEVVGAFSPNTSKRDMICQTYRMTSFDTLNELASSIDAAFVHSSTETHYDIV LYLLEHGVDVYVDKPLAATIEEAEQLVIQAERLGRKLMVGFNRRFAPMYMRLQNESSAHMIDVVKHRENDVGPKDATFTL LDDYLHVIDTLRFLAGNKLTLVSGHVDVNEKHELRFARHVWQDEHGMHTTSMHRTSGVNHEHVSIVRDGERLSVEEMVTL HRFKQGRHEVETFGSWDTTLVQRGFQGAIDHFISALIEDTPIQTDGRAALETQRLVSKLFA >Mature_301_residues MQKPKIGIVGLGNIAQKAYLPILSIHPRIEVVGAFSPNTSKRDMICQTYRMTSFDTLNELASSIDAAFVHSSTETHYDIV LYLLEHGVDVYVDKPLAATIEEAEQLVIQAERLGRKLMVGFNRRFAPMYMRLQNESSAHMIDVVKHRENDVGPKDATFTL LDDYLHVIDTLRFLAGNKLTLVSGHVDVNEKHELRFARHVWQDEHGMHTTSMHRTSGVNHEHVSIVRDGERLSVEEMVTL HRFKQGRHEVETFGSWDTTLVQRGFQGAIDHFISALIEDTPIQTDGRAALETQRLVSKLFA
Specific function: Unknown
COG id: COG0673
COG function: function code R; Predicted dehydrogenases and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To S.typhimurium mviM [H]
Homologues:
Organism=Escherichia coli, GI1787307, Length=302, Percent_Identity=45.0331125827815, Blast_Score=247, Evalue=7e-67,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR000683 - InterPro: IPR004104 [H]
Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]
EC number: NA
Molecular weight: Translated: 34153; Mature: 34153
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKPKIGIVGLGNIAQKAYLPILSIHPRIEVVGAFSPNTSKRDMICQTYRMTSFDTLNEL CCCCCEEEEECCHHHHHHHCCCEEECCCEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHH ASSIDAAFVHSSTETHYDIVLYLLEHGVDVYVDKPLAATIEEAEQLVIQAERLGRKLMVG HHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHC FNRRFAPMYMRLQNESSAHMIDVVKHRENDVGPKDATFTLLDDYLHVIDTLRFLAGNKLT CCCCCCHHHEEECCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEE LVSGHVDVNEKHELRFARHVWQDEHGMHTTSMHRTSGVNHEHVSIVRDGERLSVEEMVTL EEECCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCEEEEEECCCCCCHHHHHHH HRFKQGRHEVETFGSWDTTLVQRGFQGAIDHFISALIEDTPIQTDGRAALETQRLVSKLF HHHHHCHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHC A C >Mature Secondary Structure MQKPKIGIVGLGNIAQKAYLPILSIHPRIEVVGAFSPNTSKRDMICQTYRMTSFDTLNEL CCCCCEEEEECCHHHHHHHCCCEEECCCEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHH ASSIDAAFVHSSTETHYDIVLYLLEHGVDVYVDKPLAATIEEAEQLVIQAERLGRKLMVG HHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHC FNRRFAPMYMRLQNESSAHMIDVVKHRENDVGPKDATFTLLDDYLHVIDTLRFLAGNKLT CCCCCCHHHEEECCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEE LVSGHVDVNEKHELRFARHVWQDEHGMHTTSMHRTSGVNHEHVSIVRDGERLSVEEMVTL EEECCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCEEEEEECCCCCCHHHHHHH HRFKQGRHEVETFGSWDTTLVQRGFQGAIDHFISALIEDTPIQTDGRAALETQRLVSKLF HHHHHCHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHC A C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503 [H]