| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is msrAB [H]
Identifier: 229917192
GI number: 229917192
Start: 1432681
End: 1433631
Strand: Reverse
Name: msrAB [H]
Synonym: EAT1b_1466
Alternate gene names: 229917192
Gene position: 1433631-1432681 (Counterclockwise)
Preceding gene: 229917193
Following gene: 229917191
Centisome position: 47.79
GC content: 49.63
Gene sequence:
>951_bases ATGGCAAAAGCTACATTTGCGGGAGGCTGTTTCTGGTGCATGGTCAAACCGTTTCATAAATATGAGGGAGTGGAGCGTGT CATTTCTGGATATACAGGAGGACATGTCGACAACCCGACGTATCAACAAGTCTGTTCGGAGACGACAGGACATTTAGAGG CGGTTGAAATCACATTCGATCCAGAAGTCATTTCGTATGAAGAGTTGCTACGTATCTATTGGCGTCAAATCGATCCGACA GATGGTGGAGGGCAGTTCAATGACCGCGGTGAATCGTACCGTCCAGCCATCTTCTATCATTCAGAAGAGCAACGGGCTGC AGCGGAGCGTTCGAAACAAGAAGTGGAAGATTCGGGTCGCTTCGATCGTTCGATTGAAGTCGATATCCGCCCTGCGAAAA CGTTCTGGGAAGCGGAAGACTATCATCAAGACTACTATAAAAAAAATCCGTTCCGCTATGAGATGTACCGTGTCGGTTCA GGGCGCGCGAAGTTCATTAAAGAGGCATGGAGCGATCGTAAACAACAACAAGCACTTCGTGAGCGCTTGACACCGATGCA GTATAAAGTGACGCAAGAAAACGGGACAGAGCCACCGTTCCAAAATGAATATTGGGATGAAGAGCGGGAGGGGTTGTACG TCGATATCGTCGACGGGACACCACTCTTCACATCGCACGATAAGTTTCAGTCGAATTGCGGATGGCCGAGCTTCTCACGT CCAATCGAGGAGAAGCGCGTCGACTTGAACATGGACACGACGCATCACATGGTACGGACAGAAGTCCGTTCAAAACAAGG GGACAGCCACCTTGGTCACGTGTTTGATGACGGTCCGAAAGAGCTTGGCGGCTTACGCTATTGCATCAACTCGGCCGCTC TCCGATTCATTCCTGTAGAAGAGCTTGAAGAGGCGGGGTACGGGGAATATAAACACTTATTCAACAAGTGA
Upstream 100 bases:
>100_bases CAGGTGGAAGAGGACTAAAGCGAGAACACATTTTGTGGTTCTCGTTTTTTGTTGTCTTGCCACATTTTTGGGTACACTAC AAAGTAAGGAGGGATTTATC
Downstream 100 bases:
>100_bases AGGGGAGAGCCGTATGTTCACAGCCGTCAAACAACAAATTCGGTGCGAGACGATTGGGACCGTCCTTGATTTTTATGACC AGTCGATTCGACAGCTTTCG
Product: peptide methionine sulfoxide reductase
Products: NA
Alternate protein names: Peptide methionine sulfoxide reductase msrA; Protein-methionine-S-oxide reductase; Peptide-methionine (S)-S-oxide reductase; Peptide Met(O) reductase; Peptide methionine sulfoxide reductase msrB; Peptide-methionine (R)-S-oxide reductase [H]
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MAKATFAGGCFWCMVKPFHKYEGVERVISGYTGGHVDNPTYQQVCSETTGHLEAVEITFDPEVISYEELLRIYWRQIDPT DGGGQFNDRGESYRPAIFYHSEEQRAAAERSKQEVEDSGRFDRSIEVDIRPAKTFWEAEDYHQDYYKKNPFRYEMYRVGS GRAKFIKEAWSDRKQQQALRERLTPMQYKVTQENGTEPPFQNEYWDEEREGLYVDIVDGTPLFTSHDKFQSNCGWPSFSR PIEEKRVDLNMDTTHHMVRTEVRSKQGDSHLGHVFDDGPKELGGLRYCINSAALRFIPVEELEEAGYGEYKHLFNK
Sequences:
>Translated_316_residues MAKATFAGGCFWCMVKPFHKYEGVERVISGYTGGHVDNPTYQQVCSETTGHLEAVEITFDPEVISYEELLRIYWRQIDPT DGGGQFNDRGESYRPAIFYHSEEQRAAAERSKQEVEDSGRFDRSIEVDIRPAKTFWEAEDYHQDYYKKNPFRYEMYRVGS GRAKFIKEAWSDRKQQQALRERLTPMQYKVTQENGTEPPFQNEYWDEEREGLYVDIVDGTPLFTSHDKFQSNCGWPSFSR PIEEKRVDLNMDTTHHMVRTEVRSKQGDSHLGHVFDDGPKELGGLRYCINSAALRFIPVEELEEAGYGEYKHLFNK >Mature_315_residues AKATFAGGCFWCMVKPFHKYEGVERVISGYTGGHVDNPTYQQVCSETTGHLEAVEITFDPEVISYEELLRIYWRQIDPTD GGGQFNDRGESYRPAIFYHSEEQRAAAERSKQEVEDSGRFDRSIEVDIRPAKTFWEAEDYHQDYYKKNPFRYEMYRVGSG RAKFIKEAWSDRKQQQALRERLTPMQYKVTQENGTEPPFQNEYWDEEREGLYVDIVDGTPLFTSHDKFQSNCGWPSFSRP IEEKRVDLNMDTTHHMVRTEVRSKQGDSHLGHVFDDGPKELGGLRYCINSAALRFIPVEELEEAGYGEYKHLFNK
Specific function: Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine [H]
COG id: COG0225
COG function: function code O; Peptide methionine sulfoxide reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the msrB Met sulfoxide reductase family [H]
Homologues:
Organism=Homo sapiens, GI6912516, Length=153, Percent_Identity=46.4052287581699, Blast_Score=133, Evalue=2e-31, Organism=Homo sapiens, GI208609995, Length=153, Percent_Identity=46.4052287581699, Blast_Score=132, Evalue=5e-31, Organism=Homo sapiens, GI301336164, Length=136, Percent_Identity=49.2647058823529, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI301336162, Length=136, Percent_Identity=49.2647058823529, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI73089054, Length=136, Percent_Identity=49.2647058823529, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI37620216, Length=136, Percent_Identity=49.2647058823529, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI117606353, Length=126, Percent_Identity=44.4444444444444, Blast_Score=105, Evalue=4e-23, Organism=Homo sapiens, GI208609993, Length=115, Percent_Identity=46.0869565217391, Blast_Score=94, Evalue=1e-19, Organism=Escherichia coli, GI1790665, Length=153, Percent_Identity=47.7124183006536, Blast_Score=136, Evalue=1e-33, Organism=Escherichia coli, GI1788077, Length=134, Percent_Identity=44.0298507462687, Blast_Score=123, Evalue=1e-29, Organism=Caenorhabditis elegans, GI17553450, Length=146, Percent_Identity=41.7808219178082, Blast_Score=108, Evalue=3e-24, Organism=Caenorhabditis elegans, GI115532676, Length=123, Percent_Identity=43.9024390243902, Blast_Score=107, Evalue=8e-24, Organism=Caenorhabditis elegans, GI17533973, Length=146, Percent_Identity=34.9315068493151, Blast_Score=86, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6320881, Length=158, Percent_Identity=33.5443037974684, Blast_Score=87, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6319816, Length=131, Percent_Identity=32.0610687022901, Blast_Score=74, Evalue=3e-14, Organism=Drosophila melanogaster, GI24645799, Length=124, Percent_Identity=45.9677419354839, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI45553335, Length=124, Percent_Identity=45.9677419354839, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI21356369, Length=124, Percent_Identity=45.9677419354839, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI221378664, Length=124, Percent_Identity=46.7741935483871, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI221378662, Length=131, Percent_Identity=45.0381679389313, Blast_Score=112, Evalue=3e-25, Organism=Drosophila melanogaster, GI24645801, Length=135, Percent_Identity=42.2222222222222, Blast_Score=109, Evalue=2e-24, Organism=Drosophila melanogaster, GI24645804, Length=135, Percent_Identity=42.2222222222222, Blast_Score=109, Evalue=3e-24, Organism=Drosophila melanogaster, GI24664627, Length=144, Percent_Identity=38.1944444444444, Blast_Score=90, Evalue=2e-18, Organism=Drosophila melanogaster, GI24664631, Length=144, Percent_Identity=37.5, Blast_Score=85, Evalue=7e-17, Organism=Drosophila melanogaster, GI45553131, Length=137, Percent_Identity=37.2262773722628, Blast_Score=83, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002579 - InterPro: IPR011057 - InterPro: IPR002569 [H]
Pfam domain/function: PF01625 PMSR; PF01641 SelR [H]
EC number: =1.8.4.11; =1.8.4.12 [H]
Molecular weight: Translated: 36885; Mature: 36754
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKATFAGGCFWCMVKPFHKYEGVERVISGYTGGHVDNPTYQQVCSETTGHLEAVEITFD CCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEEC PEVISYEELLRIYWRQIDPTDGGGQFNDRGESYRPAIFYHSEEQRAAAERSKQEVEDSGR CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCC FDRSIEVDIRPAKTFWEAEDYHQDYYKKNPFRYEMYRVGSGRAKFIKEAWSDRKQQQALR CCCEEEEEEECCHHHHCHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHH ERLTPMQYKVTQENGTEPPFQNEYWDEEREGLYVDIVDGTPLFTSHDKFQSNCGWPSFSR HHCCCCEEEEECCCCCCCCCCCCCCCHHHCCEEEEEECCCCCCCCCHHHHHCCCCCCCCC PIEEKRVDLNMDTTHHMVRTEVRSKQGDSHLGHVFDDGPKELGGLRYCINSAALRFIPVE CHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEECHH ELEEAGYGEYKHLFNK HHHHCCCCHHHHHHCC >Mature Secondary Structure AKATFAGGCFWCMVKPFHKYEGVERVISGYTGGHVDNPTYQQVCSETTGHLEAVEITFD CCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEEC PEVISYEELLRIYWRQIDPTDGGGQFNDRGESYRPAIFYHSEEQRAAAERSKQEVEDSGR CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCC FDRSIEVDIRPAKTFWEAEDYHQDYYKKNPFRYEMYRVGSGRAKFIKEAWSDRKQQQALR CCCEEEEEEECCHHHHCHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHH ERLTPMQYKVTQENGTEPPFQNEYWDEEREGLYVDIVDGTPLFTSHDKFQSNCGWPSFSR HHCCCCEEEEECCCCCCCCCCCCCCCHHHCCEEEEEECCCCCCCCCHHHHHCCCCCCCCC PIEEKRVDLNMDTTHHMVRTEVRSKQGDSHLGHVFDDGPKELGGLRYCINSAALRFIPVE CHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEECHH ELEEAGYGEYKHLFNK HHHHCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]