| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229917191
Identifier: 229917191
GI number: 229917191
Start: 1431381
End: 1432667
Strand: Reverse
Name: 229917191
Synonym: EAT1b_1465
Alternate gene names: NA
Gene position: 1432667-1431381 (Counterclockwise)
Preceding gene: 229917192
Following gene: 229917190
Centisome position: 47.76
GC content: 47.79
Gene sequence:
>1287_bases ATGTTCACAGCCGTCAAACAACAAATTCGGTGCGAGACGATTGGGACCGTCCTTGATTTTTATGACCAGTCGATTCGACA GCTTTCGGAAGAGGCGAGACAAGAGAAGTACGCGAAGATGAGTTCAAGCCCGTTCTCGTTCTTTCGAGGGAGCTCACACT TGTTCTACTACGACTTTGCGAAAGTACCGATCGCCTTTGACACAGGTCCTGACCATCCGACGTTCATTCAAGGAGACTTA CACTTTGAAAATTTCGGTGTGTTCGAAGACGGGGCCGGCACCATCATCTATGACGTAAACGACTTTGATGAGGCGTATAT CGGGTCCTATCTGTTCGATTTGTTGCGGATGGCGGTCTCTGTCGATTTGTTCGCCGCCGAGTCAGGATTCGACGGCAAGG CAGCCATTCAAGCGTTTGCTGAGTCCTATGCCAAAGCCATTGAAAAACATGCGCTTGGACGGAGTGAGCATATTCAATTC ACGAAAGAGAATACGTGTAAAGCGGTCAAAAAAGTCATTAAAAAAGCGGAGAAGAAGAAAGGCGAATTCATGTCCGAACG GACGGAGGTACGGGACGAGGAACGTTATTTTTCGACGAGTGACGACCTGCTTCCCGTCTCTTCAGAAGTACGGGAGAAAA TTGAAGCGGCATGGGGCGATTATCTGTCTTCATTGTCAGACCAACACCGACATCATGCCGATCACTACGAAATTAAAGAT ATCGCCATCAAACTTCAGAGCGGCACGGCTTCAATCGGTTTAGAACGCTACTATATTTTGATTGAAGGTGCCGACGAAGA ACATGATGAAGATGTTATTTTAGAGATGAAGCAAGCACAGTCCGCCGTCCCGTCTCTCTTTCTTCCGACACATCCGCTGT TTGAGAACGGATTGTCGCATCAAGGCGCTCGTGTCGTCGCCGCACAACGAGCAATGGTCCACAGTCGTGACCCGTATCTC GGCTATTTAACAATCGACGATAAAGAATATTATGTGAGGCAACGTTCTCCGTATAAGCGGAAAGTGAAAGCGAAACACAT GAAAGATGAGACGTCGCTCATTGAGACGTTGAAAGTGCAAGTGCAAATCACGGCGAAGATTCACGCACGGGCCGATGCGT CATCGAATGTGCTCGATTATACGGCAAGCGAACGAATCGCGGCGGCAATCGGTGATTCTCCGTCCCTGTTTATTCGACAG TTATCGAGATGGGCTGATTTTTATGCAAATCAAGTTCGTTTTGACTATGACGCCTTTTTAAATTGGGTCGAGTCAAGGAA TCGTTAA
Upstream 100 bases:
>100_bases ATCAACTCGGCCGCTCTCCGATTCATTCCTGTAGAAGAGCTTGAAGAGGCGGGGTACGGGGAATATAAACACTTATTCAA CAAGTGAAGGGGAGAGCCGT
Downstream 100 bases:
>100_bases AGATACTTGCGAATCGAGGATGAAATCCTTCACAATGGAAGTGTAAAGGATGTGTACGGACTATGATTACAGAACAACAA GTCATCGCCCAAATGCGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 428; Mature: 428
Protein sequence:
>428_residues MFTAVKQQIRCETIGTVLDFYDQSIRQLSEEARQEKYAKMSSSPFSFFRGSSHLFYYDFAKVPIAFDTGPDHPTFIQGDL HFENFGVFEDGAGTIIYDVNDFDEAYIGSYLFDLLRMAVSVDLFAAESGFDGKAAIQAFAESYAKAIEKHALGRSEHIQF TKENTCKAVKKVIKKAEKKKGEFMSERTEVRDEERYFSTSDDLLPVSSEVREKIEAAWGDYLSSLSDQHRHHADHYEIKD IAIKLQSGTASIGLERYYILIEGADEEHDEDVILEMKQAQSAVPSLFLPTHPLFENGLSHQGARVVAAQRAMVHSRDPYL GYLTIDDKEYYVRQRSPYKRKVKAKHMKDETSLIETLKVQVQITAKIHARADASSNVLDYTASERIAAAIGDSPSLFIRQ LSRWADFYANQVRFDYDAFLNWVESRNR
Sequences:
>Translated_428_residues MFTAVKQQIRCETIGTVLDFYDQSIRQLSEEARQEKYAKMSSSPFSFFRGSSHLFYYDFAKVPIAFDTGPDHPTFIQGDL HFENFGVFEDGAGTIIYDVNDFDEAYIGSYLFDLLRMAVSVDLFAAESGFDGKAAIQAFAESYAKAIEKHALGRSEHIQF TKENTCKAVKKVIKKAEKKKGEFMSERTEVRDEERYFSTSDDLLPVSSEVREKIEAAWGDYLSSLSDQHRHHADHYEIKD IAIKLQSGTASIGLERYYILIEGADEEHDEDVILEMKQAQSAVPSLFLPTHPLFENGLSHQGARVVAAQRAMVHSRDPYL GYLTIDDKEYYVRQRSPYKRKVKAKHMKDETSLIETLKVQVQITAKIHARADASSNVLDYTASERIAAAIGDSPSLFIRQ LSRWADFYANQVRFDYDAFLNWVESRNR >Mature_428_residues MFTAVKQQIRCETIGTVLDFYDQSIRQLSEEARQEKYAKMSSSPFSFFRGSSHLFYYDFAKVPIAFDTGPDHPTFIQGDL HFENFGVFEDGAGTIIYDVNDFDEAYIGSYLFDLLRMAVSVDLFAAESGFDGKAAIQAFAESYAKAIEKHALGRSEHIQF TKENTCKAVKKVIKKAEKKKGEFMSERTEVRDEERYFSTSDDLLPVSSEVREKIEAAWGDYLSSLSDQHRHHADHYEIKD IAIKLQSGTASIGLERYYILIEGADEEHDEDVILEMKQAQSAVPSLFLPTHPLFENGLSHQGARVVAAQRAMVHSRDPYL GYLTIDDKEYYVRQRSPYKRKVKAKHMKDETSLIETLKVQVQITAKIHARADASSNVLDYTASERIAAAIGDSPSLFIRQ LSRWADFYANQVRFDYDAFLNWVESRNR
Specific function: Unknown
COG id: COG4320
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48876; Mature: 48876
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTAVKQQIRCETIGTVLDFYDQSIRQLSEEARQEKYAKMSSSPFSFFRGSSHLFYYDFA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEEEEE KVPIAFDTGPDHPTFIQGDLHFENFGVFEDGAGTIIYDVNDFDEAYIGSYLFDLLRMAVS CCEEEECCCCCCCCEEECCEEECCCCCEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHH VDLFAAESGFDGKAAIQAFAESYAKAIEKHALGRSEHIQFTKENTCKAVKKVIKKAEKKK HHHEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHH GEFMSERTEVRDEERYFSTSDDLLPVSSEVREKIEAAWGDYLSSLSDQHRHHADHYEIKD HHHHHHHHHCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE IAIKLQSGTASIGLERYYILIEGADEEHDEDVILEMKQAQSAVPSLFLPTHPLFENGLSH EEEEEECCCCEECEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEECCCCHHHHCCCCC QGARVVAAQRAMVHSRDPYLGYLTIDDKEYYVRQRSPYKRKVKAKHMKDETSLIETLKVQ CCCHHHHHHHHHHHCCCCEEEEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEE VQITAKIHARADASSNVLDYTASERIAAAIGDSPSLFIRQLSRWADFYANQVRFDYDAFL EEEEEEEEECCCCCCCCEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEECHHHHH NWVESRNR HHHHHCCC >Mature Secondary Structure MFTAVKQQIRCETIGTVLDFYDQSIRQLSEEARQEKYAKMSSSPFSFFRGSSHLFYYDFA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEEEEE KVPIAFDTGPDHPTFIQGDLHFENFGVFEDGAGTIIYDVNDFDEAYIGSYLFDLLRMAVS CCEEEECCCCCCCCEEECCEEECCCCCEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHH VDLFAAESGFDGKAAIQAFAESYAKAIEKHALGRSEHIQFTKENTCKAVKKVIKKAEKKK HHHEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHH GEFMSERTEVRDEERYFSTSDDLLPVSSEVREKIEAAWGDYLSSLSDQHRHHADHYEIKD HHHHHHHHHCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE IAIKLQSGTASIGLERYYILIEGADEEHDEDVILEMKQAQSAVPSLFLPTHPLFENGLSH EEEEEECCCCEECEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEECCCCHHHHCCCCC QGARVVAAQRAMVHSRDPYLGYLTIDDKEYYVRQRSPYKRKVKAKHMKDETSLIETLKVQ CCCHHHHHHHHHHHCCCCEEEEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEE VQITAKIHARADASSNVLDYTASERIAAAIGDSPSLFIRQLSRWADFYANQVRFDYDAFL EEEEEEEEECCCCCCCCEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEECHHHHH NWVESRNR HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA