| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229917111
Identifier: 229917111
GI number: 229917111
Start: 1356299
End: 1357483
Strand: Direct
Name: 229917111
Synonym: EAT1b_1385
Alternate gene names: NA
Gene position: 1356299-1357483 (Clockwise)
Preceding gene: 229917110
Following gene: 229917112
Centisome position: 45.21
GC content: 49.28
Gene sequence:
>1185_bases ATGAAGTCATGGATTGTCAGTGGCTATGCAATCGTACTAGGAATCATCATCGGTTTAGTAAGTTGGCTTTTCTTGTCCGT CGTTTATAAAGGGATTCACGTTGTATGGCATACGGTACCTGAGCAATTTGATATTCCGTTTTATCTGTTTCTCGTACCGG TCATCGCTGGTGTAAGCATCGGTCTGTTGCAACGTCGGTATGGGCAAATGCCTCGTCTCATGCCAGAAGTGATGGAAGAA CGAAAAGATACCGGTCGTATCGACTATCGCTTGATTGGATTCACAACATTGACCGCCCTCCTCGTTCTCATCGGAGGTGC AAGCCTCGGTCCTGAGGCCGCGCTCGTCGGCATCGTCGGCGGACTCACGACATGGTTCTCCGAGCGAATCCGCTATGTTC GTCAAGAGTTAGGTGAATTACAAGAAGTCGGTCATGCCGTCGTGCTCGGGATTGTCTTCAACGCGCCACTATTTGGTGCG ATTGCTGCTGAGGAGAACGAGCAGAAGAAACAACCGATGCTAAATCTGCTGGCGACACTCGCTGGGATTGGAACGTTTTA TTTATTGAACCAACTGGACGAGCGTCCACCATTCATTATCAAATTTCCGGAGATGGAAACGATTCAACTCAATTGGACCG TCATCTTGATCGTCCTGAGCGGCATTCTTCTCGGCTGGCTTTACTTAATCAGTGAGCATGCCATGATGCAACTCTTTTCG AACGTCCCCATCTTGTTGCTAACCACGCTCGGTGGAGTCGGAATCGGTGGGATGGCGCTCTTGTACCCGGACCTTCTCTT CTCCGGAGAAGAAACCATCCTTGAGTATATCGACGAGTGGCGTCTGATTCCGCTCTACACCCTTCTTTTGTTTAGTGTAC TGAAACTGCTCTTTACCGCATTCTGTTTAGCGACCGGTTGGCGTGGCGGGCACATCTATCCTCTTCTTTTTTCTTCATTC ACGCTCGGTTACTTTTTCAGTTTACTGTTTGACATCGATATGACGTTTTCCGTCGTCTTGACGACGAGCGCCTTACTCGC GACGGCGATGCGACAACCGCTGGCCATCATCGTATTACTCGTTCTCTTTTTCCCGCCGAATAGTTGGCTCTATGTATTCG CAGTCGTTGCGATCGTTTCAAAAATTCCGCTCCCTTCGTTCATTCACGCGCCAACGAAACCTTGA
Upstream 100 bases:
>100_bases CTCCCCTTGTGGTTTCATCTACTTTTAGGTTTCATTCAGAGATGTTCAGGAGATAGCATATTATAGAAGGTTGACGGGAG CGAAAGAGGTGGATATGTAG
Downstream 100 bases:
>100_bases TTTTAGATATGAAAAAAAGGGTAAGAGATGAATAGTTATGCACTCTCTCGAAAGGAGGAACGGTTGTGAGCGAATATGAA ATGGCCATTGAAAACCTAAT
Product: Chloride channel core
Products: NA
Alternate protein names: Chloride Channel Core; Chloride Transporter ClC Family; Cl- Channel Voltage Gated; Voltage-Gated Chloride Channel
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MKSWIVSGYAIVLGIIIGLVSWLFLSVVYKGIHVVWHTVPEQFDIPFYLFLVPVIAGVSIGLLQRRYGQMPRLMPEVMEE RKDTGRIDYRLIGFTTLTALLVLIGGASLGPEAALVGIVGGLTTWFSERIRYVRQELGELQEVGHAVVLGIVFNAPLFGA IAAEENEQKKQPMLNLLATLAGIGTFYLLNQLDERPPFIIKFPEMETIQLNWTVILIVLSGILLGWLYLISEHAMMQLFS NVPILLLTTLGGVGIGGMALLYPDLLFSGEETILEYIDEWRLIPLYTLLLFSVLKLLFTAFCLATGWRGGHIYPLLFSSF TLGYFFSLLFDIDMTFSVVLTTSALLATAMRQPLAIIVLLVLFFPPNSWLYVFAVVAIVSKIPLPSFIHAPTKP
Sequences:
>Translated_394_residues MKSWIVSGYAIVLGIIIGLVSWLFLSVVYKGIHVVWHTVPEQFDIPFYLFLVPVIAGVSIGLLQRRYGQMPRLMPEVMEE RKDTGRIDYRLIGFTTLTALLVLIGGASLGPEAALVGIVGGLTTWFSERIRYVRQELGELQEVGHAVVLGIVFNAPLFGA IAAEENEQKKQPMLNLLATLAGIGTFYLLNQLDERPPFIIKFPEMETIQLNWTVILIVLSGILLGWLYLISEHAMMQLFS NVPILLLTTLGGVGIGGMALLYPDLLFSGEETILEYIDEWRLIPLYTLLLFSVLKLLFTAFCLATGWRGGHIYPLLFSSF TLGYFFSLLFDIDMTFSVVLTTSALLATAMRQPLAIIVLLVLFFPPNSWLYVFAVVAIVSKIPLPSFIHAPTKP >Mature_394_residues MKSWIVSGYAIVLGIIIGLVSWLFLSVVYKGIHVVWHTVPEQFDIPFYLFLVPVIAGVSIGLLQRRYGQMPRLMPEVMEE RKDTGRIDYRLIGFTTLTALLVLIGGASLGPEAALVGIVGGLTTWFSERIRYVRQELGELQEVGHAVVLGIVFNAPLFGA IAAEENEQKKQPMLNLLATLAGIGTFYLLNQLDERPPFIIKFPEMETIQLNWTVILIVLSGILLGWLYLISEHAMMQLFS NVPILLLTTLGGVGIGGMALLYPDLLFSGEETILEYIDEWRLIPLYTLLLFSVLKLLFTAFCLATGWRGGHIYPLLFSSF TLGYFFSLLFDIDMTFSVVLTTSALLATAMRQPLAIIVLLVLFFPPNSWLYVFAVVAIVSKIPLPSFIHAPTKP
Specific function: Unknown
COG id: COG0038
COG function: function code P; Chloride channel protein EriC
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43902; Mature: 43902
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSWIVSGYAIVLGIIIGLVSWLFLSVVYKGIHVVWHTVPEQFDIPFYLFLVPVIAGVSI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH GLLQRRYGQMPRLMPEVMEERKDTGRIDYRLIGFTTLTALLVLIGGASLGPEAALVGIVG HHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHH GLTTWFSERIRYVRQELGELQEVGHAVVLGIVFNAPLFGAIAAEENEQKKQPMLNLLATL HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHH AGIGTFYLLNQLDERPPFIIKFPEMETIQLNWTVILIVLSGILLGWLYLISEHAMMQLFS HHHHHHHHHHHHCCCCCEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NVPILLLTTLGGVGIGGMALLYPDLLFSGEETILEYIDEWRLIPLYTLLLFSVLKLLFTA CCCCEEHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH FCLATGWRGGHIYPLLFSSFTLGYFFSLLFDIDMTFSVVLTTSALLATAMRQPLAIIVLL HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLFFPPNSWLYVFAVVAIVSKIPLPSFIHAPTKP HHHCCCCCHHHHHHHHHHHHHCCCCHHCCCCCCC >Mature Secondary Structure MKSWIVSGYAIVLGIIIGLVSWLFLSVVYKGIHVVWHTVPEQFDIPFYLFLVPVIAGVSI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH GLLQRRYGQMPRLMPEVMEERKDTGRIDYRLIGFTTLTALLVLIGGASLGPEAALVGIVG HHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHH GLTTWFSERIRYVRQELGELQEVGHAVVLGIVFNAPLFGAIAAEENEQKKQPMLNLLATL HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHH AGIGTFYLLNQLDERPPFIIKFPEMETIQLNWTVILIVLSGILLGWLYLISEHAMMQLFS HHHHHHHHHHHHCCCCCEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NVPILLLTTLGGVGIGGMALLYPDLLFSGEETILEYIDEWRLIPLYTLLLFSVLKLLFTA CCCCEEHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH FCLATGWRGGHIYPLLFSSFTLGYFFSLLFDIDMTFSVVLTTSALLATAMRQPLAIIVLL HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLFFPPNSWLYVFAVVAIVSKIPLPSFIHAPTKP HHHCCCCCHHHHHHHHHHHHHCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA