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The map label for this gene is fadF [H]

Identifier: 229917087

GI number: 229917087

Start: 1331856

End: 1333982

Strand: Reverse

Name: fadF [H]

Synonym: EAT1b_1361

Alternate gene names: 229917087

Gene position: 1333982-1331856 (Counterclockwise)

Preceding gene: 229917088

Following gene: 229917085

Centisome position: 44.47

GC content: 50.87

Gene sequence:

>2127_bases
ATGTCTACATTTTTAATCGTCAACTGGATTCTATTCTTGCTCGTCCTCGGCTATGGTGTGTATTTATTTGCTACGCTAGT
TCATCAGCGTTATACGTTCATCAAGCTCGGGAAGAAGGCAGAATGGAGCCAAACGAACAAAGAACGACTCGAACAGGTCA
TGATCAACGTGTTCGGTCAAAAGAAACTGTTGAAGGATAAGAAGAGTGGCGCCATTCACGTCATGATGTTTTATGGCTTC
ATCCTCGTCCAATTCGGGGCGATTGATTTCATTTGGAAAGGACTAGCGGTCGGAACACGTTTCCCTCATATCCCGCTCGG
TCCCCTCTATCCAATCTTTACGTTCATGCAAGAAATCGTCATGCTCATGATTCTCGTCGCGGTCGTTTGGGGATTCTACC
GTCGTTACGTCGAGAAGCTCGTGCGCTTGAAACGAAACTTTTTAGCAGGTCTCGCCCTTATCTTCATTGGCGGGTTGATG
GTTTCCGTCTTGTTTGGGAACGGGTTTTACCTCGTCTATAAGGAAGAGCTTCCAATGTGGGGCGAACCGGTCGCGACACT
CATCGGTTCAGCGTTTGCTTGGGTACCAGGTCCGGTCGCTTTCGCCTTGTTCGTCGTCTTTTGGTGGATGCACCTCTTAT
TCTTACTCAGCTTCATGGTCTACATCCCGCAAGGTAAACACGCGCACTTGATCGCCGGTACGCTCAACGTCTGGCTCGGG
CGCACACACAAAGTCGGTCGCTTGGCACCTGTCGATTTTTCAGCGATGGAAGAAGCGGAAGAGTCGGATGAAGAGATCGT
CTTCGGGGTCAACAAGATTGAAGACTTCAACCAGAAGCAGCTCGTCGACCTATACGCCTGTGTCGAGTGCGGACGTTGTA
CGAATGTATGTCCGGCAACAGGAACTGGGAAGATGTTGTCACCGATGGACTTGATCGTCAAGCTTCGTGACCATATGAAT
ATGAAAGGTGCGGCGGTCACGAGAAAATCACCGTGGGCACCGGCTCTCATGTTCCAAAACACGCAAGGTGCTGAAATCGC
AGCAGCGGCGCAAGATGGACATATGCTCGTCGCAGACGAATTGATCGGTAACGTCATCACAGAAGAAGAAATCTGGGCGT
GTACGACATGCCGTAACTGTGAAGACCAATGTCCGGTCATGAACGAGCACGTCGATAAAATCATCGACCTTCGTCGTTAC
CTCGTCATGATGGAAGGGAAAATGGACCCTGAGGCGCAGCGCACAGTCGCAAATATCGAGCGTCAAGGAAACCCGTGGGG
AATGAACCGGAAAGAACGTGAGAACTGGCGCAAGGACACAGAACTCGTCATCCCGACGGCGAAAGAGAAGAAAAAAGCAG
GAGAAGAGTTCGAGTATCTCTTCTGGGTCGGCGCGATGGGCTCTTACGATAGCCGTAGCCAAAAAGTCGCGCAGAGCTTT
GCGAGCGTGTTGAACAAGGCGGGCGTCTCATTCGCCATTCTCGGAAATGAAGAGAAGAACTCAGGGGATACTCCACGTCG
AATCGGAAACGAGTTGCTCTTCCAAGAACTCGCTGAAGCGAACATTAAGTTGTTCGAGAAGTATGGGGTGACGAAAATCG
TCACGGTCGACCCACACGCGTACAACACCTTCAAAAACGAGTATCCGGACTTCGGCTTGACTGATGTGAAAGTGTATCAT
CATACGGAGTTGCTCGCAGAGTTGCTCGATACGGGTCGAATTCAACCAGATCTTCAAGTGAATGAACGTGTCGTCTATCA
CGACTCTTGTTACCTCGGTCGTTATAACGGCATTTACGATGCACCGCGATTCGTCCTGGAACGCATACCGGGTGTCGAAC
TCGTCGAAGCGACACGTAACCGCGAAAACGGCATGTGCTGTGGAGCGGGTGGCGGTCTCATGTGGCAGGAAGAAAAAGTC
GGGACACGTGTCAACGTGGCTCGGACAGAACAGTTGCTAGAGACGAAACCGACCGTCATCGGATCGGCGTGTCCGTACTG
CTTGACGATGTTATCAGATGGAACGAAAGCGAAAGAAGTTGATGAGACCGTCGGCACGTTCGATGTCGTCGAATTGCTCG
ATCGCTCGCTGAAGGCCATCGAAATTCCAGAACCAGTTGTCCAATAA

Upstream 100 bases:

>100_bases
AACTTCTGACGAGAACTTCATAAAAATGAATGACTGTTCATTCATCATTTGATATACTGAATTCAAGATTGAATCCGTTT
TCAAAGGGGGAGTTTTGGGG

Downstream 100 bases:

>100_bases
TACAACAAGGCACGGTCCGCGGACCGTGCCTTGTTCGTTTACTGCATCTCAGAGGTGGATAGAAGGGAAGAGGTCAAGTG
AGATAACCCTTGTGTCGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 708; Mature: 707

Protein sequence:

>708_residues
MSTFLIVNWILFLLVLGYGVYLFATLVHQRYTFIKLGKKAEWSQTNKERLEQVMINVFGQKKLLKDKKSGAIHVMMFYGF
ILVQFGAIDFIWKGLAVGTRFPHIPLGPLYPIFTFMQEIVMLMILVAVVWGFYRRYVEKLVRLKRNFLAGLALIFIGGLM
VSVLFGNGFYLVYKEELPMWGEPVATLIGSAFAWVPGPVAFALFVVFWWMHLLFLLSFMVYIPQGKHAHLIAGTLNVWLG
RTHKVGRLAPVDFSAMEEAEESDEEIVFGVNKIEDFNQKQLVDLYACVECGRCTNVCPATGTGKMLSPMDLIVKLRDHMN
MKGAAVTRKSPWAPALMFQNTQGAEIAAAAQDGHMLVADELIGNVITEEEIWACTTCRNCEDQCPVMNEHVDKIIDLRRY
LVMMEGKMDPEAQRTVANIERQGNPWGMNRKERENWRKDTELVIPTAKEKKKAGEEFEYLFWVGAMGSYDSRSQKVAQSF
ASVLNKAGVSFAILGNEEKNSGDTPRRIGNELLFQELAEANIKLFEKYGVTKIVTVDPHAYNTFKNEYPDFGLTDVKVYH
HTELLAELLDTGRIQPDLQVNERVVYHDSCYLGRYNGIYDAPRFVLERIPGVELVEATRNRENGMCCGAGGGLMWQEEKV
GTRVNVARTEQLLETKPTVIGSACPYCLTMLSDGTKAKEVDETVGTFDVVELLDRSLKAIEIPEPVVQ

Sequences:

>Translated_708_residues
MSTFLIVNWILFLLVLGYGVYLFATLVHQRYTFIKLGKKAEWSQTNKERLEQVMINVFGQKKLLKDKKSGAIHVMMFYGF
ILVQFGAIDFIWKGLAVGTRFPHIPLGPLYPIFTFMQEIVMLMILVAVVWGFYRRYVEKLVRLKRNFLAGLALIFIGGLM
VSVLFGNGFYLVYKEELPMWGEPVATLIGSAFAWVPGPVAFALFVVFWWMHLLFLLSFMVYIPQGKHAHLIAGTLNVWLG
RTHKVGRLAPVDFSAMEEAEESDEEIVFGVNKIEDFNQKQLVDLYACVECGRCTNVCPATGTGKMLSPMDLIVKLRDHMN
MKGAAVTRKSPWAPALMFQNTQGAEIAAAAQDGHMLVADELIGNVITEEEIWACTTCRNCEDQCPVMNEHVDKIIDLRRY
LVMMEGKMDPEAQRTVANIERQGNPWGMNRKERENWRKDTELVIPTAKEKKKAGEEFEYLFWVGAMGSYDSRSQKVAQSF
ASVLNKAGVSFAILGNEEKNSGDTPRRIGNELLFQELAEANIKLFEKYGVTKIVTVDPHAYNTFKNEYPDFGLTDVKVYH
HTELLAELLDTGRIQPDLQVNERVVYHDSCYLGRYNGIYDAPRFVLERIPGVELVEATRNRENGMCCGAGGGLMWQEEKV
GTRVNVARTEQLLETKPTVIGSACPYCLTMLSDGTKAKEVDETVGTFDVVELLDRSLKAIEIPEPVVQ
>Mature_707_residues
STFLIVNWILFLLVLGYGVYLFATLVHQRYTFIKLGKKAEWSQTNKERLEQVMINVFGQKKLLKDKKSGAIHVMMFYGFI
LVQFGAIDFIWKGLAVGTRFPHIPLGPLYPIFTFMQEIVMLMILVAVVWGFYRRYVEKLVRLKRNFLAGLALIFIGGLMV
SVLFGNGFYLVYKEELPMWGEPVATLIGSAFAWVPGPVAFALFVVFWWMHLLFLLSFMVYIPQGKHAHLIAGTLNVWLGR
THKVGRLAPVDFSAMEEAEESDEEIVFGVNKIEDFNQKQLVDLYACVECGRCTNVCPATGTGKMLSPMDLIVKLRDHMNM
KGAAVTRKSPWAPALMFQNTQGAEIAAAAQDGHMLVADELIGNVITEEEIWACTTCRNCEDQCPVMNEHVDKIIDLRRYL
VMMEGKMDPEAQRTVANIERQGNPWGMNRKERENWRKDTELVIPTAKEKKKAGEEFEYLFWVGAMGSYDSRSQKVAQSFA
SVLNKAGVSFAILGNEEKNSGDTPRRIGNELLFQELAEANIKLFEKYGVTKIVTVDPHAYNTFKNEYPDFGLTDVKVYHH
TELLAELLDTGRIQPDLQVNERVVYHDSCYLGRYNGIYDAPRFVLERIPGVELVEATRNRENGMCCGAGGGLMWQEEKVG
TRVNVARTEQLLETKPTVIGSACPYCLTMLSDGTKAKEVDETVGTFDVVELLDRSLKAIEIPEPVVQ

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 80059; Mature: 79928

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCEECCCCCCCC
>Mature Secondary Structure 
STFLIVNWILFLLVLGYGVYLFATLVHQRYTFIKLGKKAEWSQTNKERLEQVMINVFGQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHCC
KKLLKDKKSGAIHVMMFYGFILVQFGAIDFIWKGLAVGTRFPHIPLGPLYPIFTFMQEIV
HHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
MLMILVAVVWGFYRRYVEKLVRLKRNFLAGLALIFIGGLMVSVLFGNGFYLVYKEELPMW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC
GEPVATLIGSAFAWVPGPVAFALFVVFWWMHLLFLLSFMVYIPQGKHAHLIAGTLNVWLG
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHC
RTHKVGRLAPVDFSAMEEAEESDEEIVFGVNKIEDFNQKQLVDLYACVECGRCTNVCPAT
CCCCCCCCCCCCHHHHHHHHCCCCEEEEECHHHHCCCHHHHHHHHHHHHCCCCCCCCCCC
GTGKMLSPMDLIVKLRDHMNMKGAAVTRKSPWAPALMFQNTQGAEIAAAAQDGHMLVADE
CCCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCEEEEECCCCCEEEEECCCCCEEEHHH
LIGNVITEEEIWACTTCRNCEDQCPVMNEHVDKIIDLRRYLVMMEGKMDPEAQRTVANIE
HHHHHCCCCHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
RQGNPWGMNRKERENWRKDTELVIPTAKEKKKAGEEFEYLFWVGAMGSYDSRSQKVAQSF
HCCCCCCCCCHHHHHHCCCCCEEECCCHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHH
ASVLNKAGVSFAILGNEEKNSGDTPRRIGNELLFQELAEANIKLFEKYGVTKIVTVDPHA
HHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCH
YNTFKNEYPDFGLTDVKVYHHTELLAELLDTGRIQPDLQVNERVVYHDSCYLGRYNGIYD
HHHHHHCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCEEEECCCCCCH
APRFVLERIPGVELVEATRNRENGMCCGAGGGLMWQEEKVGTRVNVARTEQLLETKPTVI
HHHHHHHHCCCCHHHHHHCCCCCCEEEECCCCCCEEHHHCCCEEEHHHHHHHHHCCCCHH
GSACPYCLTMLSDGTKAKEVDETVGTFDVVELLDRSLKAIEIPEPVVQ
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]