| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
Click here to switch to the map view.
The map label for this gene is 229917050
Identifier: 229917050
GI number: 229917050
Start: 1297215
End: 1298162
Strand: Reverse
Name: 229917050
Synonym: EAT1b_1324
Alternate gene names: NA
Gene position: 1298162-1297215 (Counterclockwise)
Preceding gene: 229917051
Following gene: 229917049
Centisome position: 43.27
GC content: 51.27
Gene sequence:
>948_bases ATGGATATTCGGACACTAGCAGAACGAGAGCTATCCGAACTTCCATTGTTCGATATGACAGAATGGTTGGCTCGTAAAGG GGAATACGATCCGTCTTTCCGTCTTGTCGCCAGTGAGTTCGGTGTCATCACGACGCTCCTCGACCATGGCTATTATGAAG AAGCGAGTGAACGAATCGTGCCGCTCCTCGGGATGAAAGTGCCTGCTGCTTTCCATCGACTAGGTCTTGCGCTAGAAGTA AAGGCGAACGGAAAAAAAGCGGCCAAGCGCCGCTTTCGTTCGTTCTCGTCGGCTGTCATCCAACATTCGGATTTAACCGA ATGGCGACAGGCGTTCAAGTTCGATAAGAAATGGCTCGGACTCCCGCTTGTCGTTGGTCTTGCAGCTGTAGCGCTCGTAT TTTGGCCAGATTCCGAACCGCCAGTCGTCACGCCGGACGAACCGGACGAAGTCGTTGTCGAGACGGTGACAGAAGAAGAA GCGCTCGCGGAACGTCTTGAAGAACTCGAGGCAGAGGTCGCACGACTCGAAAAAGAGAATGAGAAACTTCAAGATTCGGA CGAACAGAAGCCAGAGGAATCGACTGAAGAAGCACCGGACACCTCAACGGATGTCGTACCGCTGACCGAGGTGGAAGCAC TCGTCCAAGACAAACAGTATGAAAAAGCCGACCGCCTATTAGACGGGAAAGCGAAAGTCGGACAAGAACAAGCAGTCGGA TTTTATCGACTTCTTGTCGACAATAAGTTAGGACAAGCAGACATTGCGGACTATGCGGCTTATATCGAGTCGTATCCGGA ATCCGGTTATAAGGCGGATGTCCTTTGGATGAAAGGGATTGCCGAGAAAAAAGCGAATGACCCGGCTTATCGTGAAACAT TGACGACCGTTTCAGAGATGGAAGGGACGTATTGGGCACCGATTGCGAAGTCCGTGCTCGAAGAGTAA
Upstream 100 bases:
>100_bases CTCAAACAACATGAAGACGAGGCGGTAATCGCGGAAGCACTTCAAGACGTGCGATTGTTAACGGCGAAGTTCCCGCTTTA CCCTGAACGAGGCTGAGTCA
Downstream 100 bases:
>100_bases GGTGCTACGGAAGTAGCACCTTTTCTCATGAAATTCTAATGGAGTACACCACGATTTCTCGTTTTCCTGTCGTATGATTC GAGGTAGGAGGGATGCGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MDIRTLAERELSELPLFDMTEWLARKGEYDPSFRLVASEFGVITTLLDHGYYEEASERIVPLLGMKVPAAFHRLGLALEV KANGKKAAKRRFRSFSSAVIQHSDLTEWRQAFKFDKKWLGLPLVVGLAAVALVFWPDSEPPVVTPDEPDEVVVETVTEEE ALAERLEELEAEVARLEKENEKLQDSDEQKPEESTEEAPDTSTDVVPLTEVEALVQDKQYEKADRLLDGKAKVGQEQAVG FYRLLVDNKLGQADIADYAAYIESYPESGYKADVLWMKGIAEKKANDPAYRETLTTVSEMEGTYWAPIAKSVLEE
Sequences:
>Translated_315_residues MDIRTLAERELSELPLFDMTEWLARKGEYDPSFRLVASEFGVITTLLDHGYYEEASERIVPLLGMKVPAAFHRLGLALEV KANGKKAAKRRFRSFSSAVIQHSDLTEWRQAFKFDKKWLGLPLVVGLAAVALVFWPDSEPPVVTPDEPDEVVVETVTEEE ALAERLEELEAEVARLEKENEKLQDSDEQKPEESTEEAPDTSTDVVPLTEVEALVQDKQYEKADRLLDGKAKVGQEQAVG FYRLLVDNKLGQADIADYAAYIESYPESGYKADVLWMKGIAEKKANDPAYRETLTTVSEMEGTYWAPIAKSVLEE >Mature_315_residues MDIRTLAERELSELPLFDMTEWLARKGEYDPSFRLVASEFGVITTLLDHGYYEEASERIVPLLGMKVPAAFHRLGLALEV KANGKKAAKRRFRSFSSAVIQHSDLTEWRQAFKFDKKWLGLPLVVGLAAVALVFWPDSEPPVVTPDEPDEVVVETVTEEE ALAERLEELEAEVARLEKENEKLQDSDEQKPEESTEEAPDTSTDVVPLTEVEALVQDKQYEKADRLLDGKAKVGQEQAVG FYRLLVDNKLGQADIADYAAYIESYPESGYKADVLWMKGIAEKKANDPAYRETLTTVSEMEGTYWAPIAKSVLEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35477; Mature: 35477
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIRTLAERELSELPLFDMTEWLARKGEYDPSFRLVASEFGVITTLLDHGYYEEASERIV CCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH PLLGMKVPAAFHRLGLALEVKANGKKAAKRRFRSFSSAVIQHSDLTEWRQAFKFDKKWLG HHHCCHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC LPLVVGLAAVALVFWPDSEPPVVTPDEPDEVVVETVTEEEALAERLEELEAEVARLEKEN HHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKLQDSDEQKPEESTEEAPDTSTDVVPLTEVEALVQDKQYEKADRLLDGKAKVGQEQAVG HHHCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHH FYRLLVDNKLGQADIADYAAYIESYPESGYKADVLWMKGIAEKKANDPAYRETLTTVSEM HHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH EGTYWAPIAKSVLEE CCCCHHHHHHHHHCC >Mature Secondary Structure MDIRTLAERELSELPLFDMTEWLARKGEYDPSFRLVASEFGVITTLLDHGYYEEASERIV CCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH PLLGMKVPAAFHRLGLALEVKANGKKAAKRRFRSFSSAVIQHSDLTEWRQAFKFDKKWLG HHHCCHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC LPLVVGLAAVALVFWPDSEPPVVTPDEPDEVVVETVTEEEALAERLEELEAEVARLEKEN HHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKLQDSDEQKPEESTEEAPDTSTDVVPLTEVEALVQDKQYEKADRLLDGKAKVGQEQAVG HHHCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHH FYRLLVDNKLGQADIADYAAYIESYPESGYKADVLWMKGIAEKKANDPAYRETLTTVSEM HHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH EGTYWAPIAKSVLEE CCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA