| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
Click here to switch to the map view.
The map label for this gene is 229917029
Identifier: 229917029
GI number: 229917029
Start: 1279409
End: 1279780
Strand: Direct
Name: 229917029
Synonym: EAT1b_1303
Alternate gene names: NA
Gene position: 1279409-1279780 (Clockwise)
Preceding gene: 229917028
Following gene: 229917052
Centisome position: 42.65
GC content: 43.82
Gene sequence:
>372_bases ATGAGCCTCATTCAACAAATCAAACAAATCTACATCCCTGTCAAAGAGTTAGACCGTGCCGTTCAATTCTATCGAGACAC GCTTGAGGTACCCTTTCTCTTTCAAGCAGGATTGCTCGCATTCTTCGACTGCGGTGGCGTACGCCTCATGTTATCCCCTC CTGAGAATGATGTATTTGCAAAATCAAGTCCAATCCTCTATTTGAGTATCGCATCCATCGATGACGCTTATGCTCAGTTG AAAAATGCAGGAGTGACTTTCATTGATGAACCACACTGTGTGGCAAAAATGGATACGACAGAAACATGGATGAGTTTCTT TAAAGACTCTGAAGACAACGTGTTGGCACTTCTCTCTGAGGTGTCGAGTTGA
Upstream 100 bases:
>100_bases TTAATGTCTCACCCAACAGGACTTACCAACCGTCTCCAACGTCAACTTGAATCAGAGTTACCCCTTCCTGTTTCAAATAC ATATTGAAAGGATGAATCCC
Downstream 100 bases:
>100_bases ATATACAAAAACAAGCGACCGCTCGCGCGGTCGCTTGTCTGTTTATTTCAATCGATCTAAGTTTTCGAGCATGATTCCCG TTCCGTGCGCGACACTGAGT
Product: Glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: Glyoxalase Family Protein; Methylmalonyl-CoA Epimerase
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MSLIQQIKQIYIPVKELDRAVQFYRDTLEVPFLFQAGLLAFFDCGGVRLMLSPPENDVFAKSSPILYLSIASIDDAYAQL KNAGVTFIDEPHCVAKMDTTETWMSFFKDSEDNVLALLSEVSS
Sequences:
>Translated_123_residues MSLIQQIKQIYIPVKELDRAVQFYRDTLEVPFLFQAGLLAFFDCGGVRLMLSPPENDVFAKSSPILYLSIASIDDAYAQL KNAGVTFIDEPHCVAKMDTTETWMSFFKDSEDNVLALLSEVSS >Mature_122_residues SLIQQIKQIYIPVKELDRAVQFYRDTLEVPFLFQAGLLAFFDCGGVRLMLSPPENDVFAKSSPILYLSIASIDDAYAQLK NAGVTFIDEPHCVAKMDTTETWMSFFKDSEDNVLALLSEVSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13820; Mature: 13689
Theoretical pI: Translated: 4.16; Mature: 4.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLIQQIKQIYIPVKELDRAVQFYRDTLEVPFLFQAGLLAFFDCGGVRLMLSPPENDVFA CHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCC KSSPILYLSIASIDDAYAQLKNAGVTFIDEPHCVAKMDTTETWMSFFKDSEDNVLALLSE CCCCEEEEEECCHHHHHHHHHHCCCEEEECCCEEEECCCHHHHHHHHCCCCCHHHHHHHH VSS HCC >Mature Secondary Structure SLIQQIKQIYIPVKELDRAVQFYRDTLEVPFLFQAGLLAFFDCGGVRLMLSPPENDVFA HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCC KSSPILYLSIASIDDAYAQLKNAGVTFIDEPHCVAKMDTTETWMSFFKDSEDNVLALLSE CCCCEEEEEECCHHHHHHHHHHCCCEEEECCCEEEECCCHHHHHHHHCCCCCHHHHHHHH VSS HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA