| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is ptsG [H]
Identifier: 229917013
GI number: 229917013
Start: 1263668
End: 1265206
Strand: Reverse
Name: ptsG [H]
Synonym: EAT1b_1287
Alternate gene names: 229917013
Gene position: 1265206-1263668 (Counterclockwise)
Preceding gene: 229917014
Following gene: 229917012
Centisome position: 42.18
GC content: 49.58
Gene sequence:
>1539_bases ATGTCACGTCTCTTTGAACGAGCGCAACAATTCGGGAAATCGTTCATGTTGCCGATTGCTGTCTTACCGGCCGCTGGACT ACTGTTAGGAATTGGGGGCGCCTTGTCTAACCCGAATACGGTGCAAGCGTACCCGTTCCTCGACATCGACTGGTTGCAAC ATCTATTCACCATTATGGCGGCTGCCGGTTCAATCGTATTCGCGAACTTGGCTGTGTTGTTTGCCATCGGTGTCGCTGTC GGACTCGCGAAGTCTGATAAAGGAACGGCCGGATTGGCGGCGATGCTTGGGTATTTGATTATGAATGCGACCATCAACGC AATGCTTCAGATTACTGGAGAGTTGATGGAAACGAACTTAGCGAGTGCCGGTCAAGGGATGGCGCTCGGAATTCAAACGC TTGAAACTGGTGTGTTCGGTGGGATCTTGATTGGGATTGTCACGGCGCTCTTGCATAACCGCTACAACAAGCAAGTGCTT CCACAGTTCCTCGGGTTCTTCAGCGGATCACGTTTTGTCCCAATCATCACGTCATTCGTTGCGATTGGTGTAGGGATTGG GCTCTACTTCATCTGGCCGACGGTGCAGAACGGGATTTTCTCGTTAGGTGGTCTCGTTGAAAAAACAGGATATATCGGAA CATTCATTTATGGGTTCGTCCTTCGGATGCTTGGACCATTTGGGTTGCACCATATCTTCTACATTCCGTTTTGGACCACT GGGCTCGGGGGCTCGATGGTCATTGACGGATCATTGATCGAAGGAACGCAAAAGATTTTCTTCGCGCAGTTGGCTGACCC GAATACGACACAATTCTATGAAGGAACAGCACGATTTATGTCGGGTCGATTCATCACGATGATGTTTGGTCTTCTCGGTG CGGCGCTTGCCATGTATCACTGTGCAAAGCCGGAGCAAAAGAAAGTCGTGTTCGGTCTCTTGTTCTCGGCAGCACTCACC TCATTCTTGACGGGAATCACAGAGCCACTCGAATTCGCATTTTTGTTTGTCGCGCCGGTCCTCTATCTAGTACATGCTAT CTTTGATGGACTTGCTTTTATGATGGCTCACATCTTTGAGATTACGATTGGTCAAACATTCTCTGGTGGGTTCATTGATT TTATCTTATTCGGGGTCTTACAAGGGAATGACAAGACGAACTGGATGCTCGTACCGGTCATCGGTGCCTTCTGGTTCTTG CTCTACTACGTAACGTTCCGTTTCCTCATCACAAAGTTCAATTTCATGACACCTGGACGATCGGATGAGACAGTGAAAAC AGCAGACGTTGCGGCGTCGGATCGTACGTCAGCCATCATTGCGGCACTAGGTGGCGACGACAATATTGAGACGGTCGACT GCTGCGCGACACGCCTCCGCGTCACCGTCAACGACAATCAACATGTCCGTGAAGACTTGTTGAAAGAGACGGGCGCTCAC GGGGTGGTTCAAAAAGGGAATGGAATTCAAGTAATCTACGGTCCTTCTGTTACAATTATTAAGAATGAAGTCCAAGAGGC GTTAGGCCGGGGCGAATAA
Upstream 100 bases:
>100_bases GAGGTCACTCTTTTTAAAATCTTTTTTACCGTAAACGCTTGCATAAAAATATTTTTCATATTATGATTCAGGTGAAAATG ATTTTAAGGAGGATTTATTC
Downstream 100 bases:
>100_bases CGAATGTGTTGGAGGGAAGAACCGTGTGGGAGCAAATAAAACACGTGTATTCAGAAATGACGGGCAGTGAGAAAAAGATT GCGGATTATCTGATGGCGAA
Product: PTS system, glucose-like IIB subunint
Products: NA
Alternate protein names: EII-Glc/EIII-Glc; EIICBA-Glc; Glucose permease IIC component; PTS system glucose-specific EIIC component; Glucose-specific phosphotransferase enzyme IIB component; PTS system glucose-specific EIIB component; Glucose-specific phosphotransferase enzyme IIA component; PTS system glucose-specific EIIA component [H]
Number of amino acids: Translated: 512; Mature: 511
Protein sequence:
>512_residues MSRLFERAQQFGKSFMLPIAVLPAAGLLLGIGGALSNPNTVQAYPFLDIDWLQHLFTIMAAAGSIVFANLAVLFAIGVAV GLAKSDKGTAGLAAMLGYLIMNATINAMLQITGELMETNLASAGQGMALGIQTLETGVFGGILIGIVTALLHNRYNKQVL PQFLGFFSGSRFVPIITSFVAIGVGIGLYFIWPTVQNGIFSLGGLVEKTGYIGTFIYGFVLRMLGPFGLHHIFYIPFWTT GLGGSMVIDGSLIEGTQKIFFAQLADPNTTQFYEGTARFMSGRFITMMFGLLGAALAMYHCAKPEQKKVVFGLLFSAALT SFLTGITEPLEFAFLFVAPVLYLVHAIFDGLAFMMAHIFEITIGQTFSGGFIDFILFGVLQGNDKTNWMLVPVIGAFWFL LYYVTFRFLITKFNFMTPGRSDETVKTADVAASDRTSAIIAALGGDDNIETVDCCATRLRVTVNDNQHVREDLLKETGAH GVVQKGNGIQVIYGPSVTIIKNEVQEALGRGE
Sequences:
>Translated_512_residues MSRLFERAQQFGKSFMLPIAVLPAAGLLLGIGGALSNPNTVQAYPFLDIDWLQHLFTIMAAAGSIVFANLAVLFAIGVAV GLAKSDKGTAGLAAMLGYLIMNATINAMLQITGELMETNLASAGQGMALGIQTLETGVFGGILIGIVTALLHNRYNKQVL PQFLGFFSGSRFVPIITSFVAIGVGIGLYFIWPTVQNGIFSLGGLVEKTGYIGTFIYGFVLRMLGPFGLHHIFYIPFWTT GLGGSMVIDGSLIEGTQKIFFAQLADPNTTQFYEGTARFMSGRFITMMFGLLGAALAMYHCAKPEQKKVVFGLLFSAALT SFLTGITEPLEFAFLFVAPVLYLVHAIFDGLAFMMAHIFEITIGQTFSGGFIDFILFGVLQGNDKTNWMLVPVIGAFWFL LYYVTFRFLITKFNFMTPGRSDETVKTADVAASDRTSAIIAALGGDDNIETVDCCATRLRVTVNDNQHVREDLLKETGAH GVVQKGNGIQVIYGPSVTIIKNEVQEALGRGE >Mature_511_residues SRLFERAQQFGKSFMLPIAVLPAAGLLLGIGGALSNPNTVQAYPFLDIDWLQHLFTIMAAAGSIVFANLAVLFAIGVAVG LAKSDKGTAGLAAMLGYLIMNATINAMLQITGELMETNLASAGQGMALGIQTLETGVFGGILIGIVTALLHNRYNKQVLP QFLGFFSGSRFVPIITSFVAIGVGIGLYFIWPTVQNGIFSLGGLVEKTGYIGTFIYGFVLRMLGPFGLHHIFYIPFWTTG LGGSMVIDGSLIEGTQKIFFAQLADPNTTQFYEGTARFMSGRFITMMFGLLGAALAMYHCAKPEQKKVVFGLLFSAALTS FLTGITEPLEFAFLFVAPVLYLVHAIFDGLAFMMAHIFEITIGQTFSGGFIDFILFGVLQGNDKTNWMLVPVIGAFWFLL YYVTFRFLITKFNFMTPGRSDETVKTADVAASDRTSAIIAALGGDDNIETVDCCATRLRVTVNDNQHVREDLLKETGAHG VVQKGNGIQVIYGPSVTIIKNEVQEALGRGE
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1263
COG function: function code G; Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787908, Length=513, Percent_Identity=43.0799220272904, Blast_Score=396, Evalue=1e-111, Organism=Escherichia coli, GI1787343, Length=504, Percent_Identity=41.6666666666667, Blast_Score=350, Evalue=1e-97, Organism=Escherichia coli, GI1786894, Length=513, Percent_Identity=37.8167641325536, Blast_Score=266, Evalue=2e-72,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011055 - InterPro: IPR018113 - InterPro: IPR004719 - InterPro: IPR001127 - InterPro: IPR001996 - InterPro: IPR003352 - InterPro: IPR013013 - InterPro: IPR011535 - InterPro: IPR011299 [H]
Pfam domain/function: PF00358 PTS_EIIA_1; PF00367 PTS_EIIB; PF02378 PTS_EIIC [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 55360; Mature: 55228
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: PS01035 PTS_EIIB_TYPE_1_CYS ; PS51098 PTS_EIIB_TYPE_1 ; PS51103 PTS_EIIC_TYPE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLFERAQQFGKSFMLPIAVLPAAGLLLGIGGALSNPNTVQAYPFLDIDWLQHLFTIMA CCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHH AAGSIVFANLAVLFAIGVAVGLAKSDKGTAGLAAMLGYLIMNATINAMLQITGELMETNL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASAGQGMALGIQTLETGVFGGILIGIVTALLHNRYNKQVLPQFLGFFSGSRFVPIITSFV HCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHH AIGVGIGLYFIWPTVQNGIFSLGGLVEKTGYIGTFIYGFVLRMLGPFGLHHIFYIPFWTT HHHHHHHHHEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHEEEEEEEEC GLGGSMVIDGSLIEGTQKIFFAQLADPNTTQFYEGTARFMSGRFITMMFGLLGAALAMYH CCCCCEEECCHHHHHHHHHHEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH CAKPEQKKVVFGLLFSAALTSFLTGITEPLEFAFLFVAPVLYLVHAIFDGLAFMMAHIFE CCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ITIGQTFSGGFIDFILFGVLQGNDKTNWMLVPVIGAFWFLLYYVTFRFLITKFNFMTPGR HHCCCCCCCHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SDETVKTADVAASDRTSAIIAALGGDDNIETVDCCATRLRVTVNDNQHVREDLLKETGAH CCCCEEHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHEEEEECCCHHHHHHHHHHCCCC GVVQKGNGIQVIYGPSVTIIKNEVQEALGRGE CEEECCCCEEEEECCCEEEEHHHHHHHHCCCC >Mature Secondary Structure SRLFERAQQFGKSFMLPIAVLPAAGLLLGIGGALSNPNTVQAYPFLDIDWLQHLFTIMA CHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHH AAGSIVFANLAVLFAIGVAVGLAKSDKGTAGLAAMLGYLIMNATINAMLQITGELMETNL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASAGQGMALGIQTLETGVFGGILIGIVTALLHNRYNKQVLPQFLGFFSGSRFVPIITSFV HCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHH AIGVGIGLYFIWPTVQNGIFSLGGLVEKTGYIGTFIYGFVLRMLGPFGLHHIFYIPFWTT HHHHHHHHHEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHEEEEEEEEC GLGGSMVIDGSLIEGTQKIFFAQLADPNTTQFYEGTARFMSGRFITMMFGLLGAALAMYH CCCCCEEECCHHHHHHHHHHEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH CAKPEQKKVVFGLLFSAALTSFLTGITEPLEFAFLFVAPVLYLVHAIFDGLAFMMAHIFE CCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ITIGQTFSGGFIDFILFGVLQGNDKTNWMLVPVIGAFWFLLYYVTFRFLITKFNFMTPGR HHCCCCCCCHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SDETVKTADVAASDRTSAIIAALGGDDNIETVDCCATRLRVTVNDNQHVREDLLKETGAH CCCCEEHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHEEEEECCCHHHHHHHHHHCCCC GVVQKGNGIQVIYGPSVTIIKNEVQEALGRGE CEEECCCCEEEEECCCEEEEHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1508157; 9384377; 2497294; 2120236; 1911744; 1906345; 9593197 [H]