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The map label for this gene is 229917008

Identifier: 229917008

GI number: 229917008

Start: 1258780

End: 1260261

Strand: Reverse

Name: 229917008

Synonym: EAT1b_1282

Alternate gene names: NA

Gene position: 1260261-1258780 (Counterclockwise)

Preceding gene: 229917010

Following gene: 229917007

Centisome position: 42.01

GC content: 51.75

Gene sequence:

>1482_bases
ATGCGTTCATTTTGGATACTCGGCAACCAACTCTCGCACGAGCTTGCGATGTTGAAGGATATAAAAGAAGATGACGTCAT
CGTCATGATTGAGGCGACGTCGCGCGCGACGTGGCGTCCGTACCATAAACAAAAGCTCGTCCTCATCTTCTCTGCGATGA
GACACTTTGCGGAAGAATTGCGCGATAAAGGATATACCGTGGATTATCACGAGGCGGATTCGTTCCAAGAGGCATGGGAC
AACCATGTGAAACAGTACAGTCCGGATGAAATTCATGTCACCGCCGTCACGGACGAACCGATGGCGAAAAAACTGAAACA
ATTCGGGAAGAAGCTTAAACTGGTCGAACATACGGATGTTCCGCTCTTCTACTTATCAAAAGAGGAAGCGACCGAGACGC
TCGGGAATGAGCCGTGGCGAATGGATCGTTTTTATCGTCACATGCGGAAGCGATTCGATGTCTTGCTCGAAGAGGGGAAG
CCACGTGGTGGGAAATGGTCGTTTGATGAGGATAACCGAAAACCGCCGAAAGAAGGACTATCGTTTCCATCGGCCGTTCA
TTTTCGTCCGGATTCAATCACGAAAGACGTTATCGAAAAAGTCGAGTCGACGTTCTCGGAACATCCGGGGGAGGTGACCC
CGTTCCATTGGCCGGTCACACATACCGAGGCGAGACGGGCACTGAATCGGTTCGTGAAAGAGCGGCTCGAGACGTTCGGT
CCGTATCAAGATGCGATGATGACGGATGAACCGGAGATGTCGCACAGTCTATTGTCGGCTGCCATCAATATCGGTCTACT
GACACCGCGAGAAGTCGTTGATGCGGCATGTCAGGCGGATGCACCGCTATCGTCGATTGAAGGATTCGTCCGGCAAATCC
TCGGTTGGCGGGAATACATGCGCGCCGTCTATCTTTCTGTCATGCCCGGTTATGAAGACGTGAACACGTTCAAGCATGAA
CGCGACTTACCGTCCTTCTTCTGGGATGCGAAGACGAATTTGAACTGTCTGCATCAAAGTTTGAAACCGGTCGTCGCGCA
TGCCCACAATCATCATATCCAGCGACTGATGGTGCTCGGAAATTATGCGACATTGTTCGAGATTTCACCGCAACAGACGA
GCGACTGGTTCAACGAGATGTATATCGATGCCTATGACTGGGTCGTCTTACCGAACGTTCTCGGGATGGCCCTTCATGCG
GACGGTGGAAAGCTCGCCACGAAACCGTATGTCGCTTCCGGAAAATATATCGACCGGATGAGTGACTACTGTCGGGATTG
CCCATACAACCCGAAACATACGACAGAAGACGACGCCTGTCCGTTCAACGCCCTCTATTGGCGGTTCATCGACCGTCACG
AGGAACGATTCTCGAAAAACCAGCGGATGAAGATGATGGTCCGCAATTGGCAAGGACGGGACGATGAGGTGAAAGCCGAC
ATCTTAGCGAAAGCCGAACAGACATTGACCGATTCCCCGTGA

Upstream 100 bases:

>100_bases
ACTGTCCACCCAGTTTTTGAACACTTGTGGGAGCATACTGTCACCTCACTTTGAAAGTAGCTCGATTGTAGCATATTGAT
GAGACAAAGGAGTCAACAAC

Downstream 100 bases:

>100_bases
ATCGGTTTTTTTACGTTCTCTTCATGAAACTTTGCGATTCCTTTATCGTGTCTTTACAATCGTTCGTTACGATAGGAGCT
GTGAGACCCCCTCACTCCAA

Product: deoxyribodipyrimidine photolyase-related protein

Products: NA

Alternate protein names: Deoxyribodipyrimidine Photolyase-Like Protein; Photolyase; Deoxyribodipyrimidine Photolyase Family Protein; Deoxyribodipyrimidine Photolyase; Photolyase Protein Family Protein; Deoxyribodipyrimidine Photolyase-Like Protein Protein; Photolyase Family Protein; Cryptochrome/Photolyase; DNA Photolyase; Bcct Transporter; Protein Related Deoxyribodipyrimidine Photolyase; Deoxyribodipyrimidine Photo-Lyase; Cryptochrome/Photolyase-Related; Photolyase Related Protein; BCCT Transporter; Alpha-Deoxyribodipyrimidine Photolyase-Related Protein; Deoxyribodipyrimidine Photolyase Related Protein; A Deoxyribodipyrimidine Photolyase-Like Protein; Deoxyribodipyrimidine Photolyase Homolog

Number of amino acids: Translated: 493; Mature: 493

Protein sequence:

>493_residues
MRSFWILGNQLSHELAMLKDIKEDDVIVMIEATSRATWRPYHKQKLVLIFSAMRHFAEELRDKGYTVDYHEADSFQEAWD
NHVKQYSPDEIHVTAVTDEPMAKKLKQFGKKLKLVEHTDVPLFYLSKEEATETLGNEPWRMDRFYRHMRKRFDVLLEEGK
PRGGKWSFDEDNRKPPKEGLSFPSAVHFRPDSITKDVIEKVESTFSEHPGEVTPFHWPVTHTEARRALNRFVKERLETFG
PYQDAMMTDEPEMSHSLLSAAINIGLLTPREVVDAACQADAPLSSIEGFVRQILGWREYMRAVYLSVMPGYEDVNTFKHE
RDLPSFFWDAKTNLNCLHQSLKPVVAHAHNHHIQRLMVLGNYATLFEISPQQTSDWFNEMYIDAYDWVVLPNVLGMALHA
DGGKLATKPYVASGKYIDRMSDYCRDCPYNPKHTTEDDACPFNALYWRFIDRHEERFSKNQRMKMMVRNWQGRDDEVKAD
ILAKAEQTLTDSP

Sequences:

>Translated_493_residues
MRSFWILGNQLSHELAMLKDIKEDDVIVMIEATSRATWRPYHKQKLVLIFSAMRHFAEELRDKGYTVDYHEADSFQEAWD
NHVKQYSPDEIHVTAVTDEPMAKKLKQFGKKLKLVEHTDVPLFYLSKEEATETLGNEPWRMDRFYRHMRKRFDVLLEEGK
PRGGKWSFDEDNRKPPKEGLSFPSAVHFRPDSITKDVIEKVESTFSEHPGEVTPFHWPVTHTEARRALNRFVKERLETFG
PYQDAMMTDEPEMSHSLLSAAINIGLLTPREVVDAACQADAPLSSIEGFVRQILGWREYMRAVYLSVMPGYEDVNTFKHE
RDLPSFFWDAKTNLNCLHQSLKPVVAHAHNHHIQRLMVLGNYATLFEISPQQTSDWFNEMYIDAYDWVVLPNVLGMALHA
DGGKLATKPYVASGKYIDRMSDYCRDCPYNPKHTTEDDACPFNALYWRFIDRHEERFSKNQRMKMMVRNWQGRDDEVKAD
ILAKAEQTLTDSP
>Mature_493_residues
MRSFWILGNQLSHELAMLKDIKEDDVIVMIEATSRATWRPYHKQKLVLIFSAMRHFAEELRDKGYTVDYHEADSFQEAWD
NHVKQYSPDEIHVTAVTDEPMAKKLKQFGKKLKLVEHTDVPLFYLSKEEATETLGNEPWRMDRFYRHMRKRFDVLLEEGK
PRGGKWSFDEDNRKPPKEGLSFPSAVHFRPDSITKDVIEKVESTFSEHPGEVTPFHWPVTHTEARRALNRFVKERLETFG
PYQDAMMTDEPEMSHSLLSAAINIGLLTPREVVDAACQADAPLSSIEGFVRQILGWREYMRAVYLSVMPGYEDVNTFKHE
RDLPSFFWDAKTNLNCLHQSLKPVVAHAHNHHIQRLMVLGNYATLFEISPQQTSDWFNEMYIDAYDWVVLPNVLGMALHA
DGGKLATKPYVASGKYIDRMSDYCRDCPYNPKHTTEDDACPFNALYWRFIDRHEERFSKNQRMKMMVRNWQGRDDEVKAD
ILAKAEQTLTDSP

Specific function: Unknown

COG id: COG3046

COG function: function code R; Uncharacterized protein related to deoxyribodipyrimidine photolyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57500; Mature: 57500

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSFWILGNQLSHELAMLKDIKEDDVIVMIEATSRATWRPYHKQKLVLIFSAMRHFAEEL
CCCEEEECCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
RDKGYTVDYHEADSFQEAWDNHVKQYSPDEIHVTAVTDEPMAKKLKQFGKKLKLVEHTDV
HHCCCEEECCCCHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCHHEECCC
PLFYLSKEEATETLGNEPWRMDRFYRHMRKRFDVLLEEGKPRGGKWSFDEDNRKPPKEGL
CEEEECHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHC
SFPSAVHFRPDSITKDVIEKVESTFSEHPGEVTPFHWPVTHTEARRALNRFVKERLETFG
CCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
PYQDAMMTDEPEMSHSLLSAAINIGLLTPREVVDAACQADAPLSSIEGFVRQILGWREYM
CHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
RAVYLSVMPGYEDVNTFKHERDLPSFFWDAKTNLNCLHQSLKPVVAHAHNHHIQRLMVLG
HHHHHHHCCCCHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
NYATLFEISPQQTSDWFNEMYIDAYDWVVLPNVLGMALHADGGKLATKPYVASGKYIDRM
CCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHH
SDYCRDCPYNPKHTTEDDACPFNALYWRFIDRHEERFSKNQRMKMMVRNWQGRDDEVKAD
HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
ILAKAEQTLTDSP
HHHHHHHHHCCCC
>Mature Secondary Structure
MRSFWILGNQLSHELAMLKDIKEDDVIVMIEATSRATWRPYHKQKLVLIFSAMRHFAEEL
CCCEEEECCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
RDKGYTVDYHEADSFQEAWDNHVKQYSPDEIHVTAVTDEPMAKKLKQFGKKLKLVEHTDV
HHCCCEEECCCCHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCHHEECCC
PLFYLSKEEATETLGNEPWRMDRFYRHMRKRFDVLLEEGKPRGGKWSFDEDNRKPPKEGL
CEEEECHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHC
SFPSAVHFRPDSITKDVIEKVESTFSEHPGEVTPFHWPVTHTEARRALNRFVKERLETFG
CCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
PYQDAMMTDEPEMSHSLLSAAINIGLLTPREVVDAACQADAPLSSIEGFVRQILGWREYM
CHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
RAVYLSVMPGYEDVNTFKHERDLPSFFWDAKTNLNCLHQSLKPVVAHAHNHHIQRLMVLG
HHHHHHHCCCCHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
NYATLFEISPQQTSDWFNEMYIDAYDWVVLPNVLGMALHADGGKLATKPYVASGKYIDRM
CCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHH
SDYCRDCPYNPKHTTEDDACPFNALYWRFIDRHEERFSKNQRMKMMVRNWQGRDDEVKAD
HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
ILAKAEQTLTDSP
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA