| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
Click here to switch to the map view.
The map label for this gene is kdpC [H]
Identifier: 229916974
GI number: 229916974
Start: 1223491
End: 1223982
Strand: Reverse
Name: kdpC [H]
Synonym: EAT1b_1248
Alternate gene names: 229916974
Gene position: 1223982-1223491 (Counterclockwise)
Preceding gene: 229916975
Following gene: 229916973
Centisome position: 40.8
GC content: 48.98
Gene sequence:
>492_bases ATGTCTTCTATAAAACAAGCAGGTATCGTCGTCAGTTTGACGATGGTCTTATGCGGTGTGGCTTATCCACTCGCTTTAAC AGTAGCAGGTCAGGCACTATTTCCGAGTCAAGCTGAAGGCAGTTTGATTGAACGCGATGGTGAACAGATTGGATCAAAGT GGATCGCGCAACCTTTCGTTTCGGAAGATTACTTCCACGGCCGACCAACGGCAGTCGATCAACTTACTGGTCAATCGGGC GGCGATAACATGGCAGAAAGCAATCCAGACCGTCCGAAACACAATCCTGAACTTCCGGGCGCAATCGAGACATCCGGATC GGGACTGGATCCGCATATCTCGATGGAACATGCGATGTCACAAGTCGAACGAATCAGTGACGCTCGCTCTGTAGCAGCAG ATAATATCGAAAAAGTCATTCGCGAAACGGCAGACGGAGAACCGTACGTGAACGTCTTGATGATGAATCTTGCACTTGAT GAGTTGAACTGA
Upstream 100 bases:
>100_bases CGAAATTTACTCGTTTATGGTGTCGGCGGTGTGATTGTTCCGTTCATAGGAATCAAAGCACTCGACATCGTCTTAAACTT ATTCATGTGAGGTGGACCGA
Downstream 100 bases:
>100_bases TGCGAGGCAAACTTCGACTTTATATCGGAGCTGCACCGGGTGTTGGTAAAACGTATAAAATGTTGGCAGACGCAAGAGCC CATCAGCAAGAAGGGGTCTC
Product: Potassium-transporting ATPase
Products: NA
Alternate protein names: ATP phosphohydrolase [potassium-transporting] C chain; Potassium-binding and translocating subunit C; Potassium-translocating ATPase C chain [H]
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MSSIKQAGIVVSLTMVLCGVAYPLALTVAGQALFPSQAEGSLIERDGEQIGSKWIAQPFVSEDYFHGRPTAVDQLTGQSG GDNMAESNPDRPKHNPELPGAIETSGSGLDPHISMEHAMSQVERISDARSVAADNIEKVIRETADGEPYVNVLMMNLALD ELN
Sequences:
>Translated_163_residues MSSIKQAGIVVSLTMVLCGVAYPLALTVAGQALFPSQAEGSLIERDGEQIGSKWIAQPFVSEDYFHGRPTAVDQLTGQSG GDNMAESNPDRPKHNPELPGAIETSGSGLDPHISMEHAMSQVERISDARSVAADNIEKVIRETADGEPYVNVLMMNLALD ELN >Mature_162_residues SSIKQAGIVVSLTMVLCGVAYPLALTVAGQALFPSQAEGSLIERDGEQIGSKWIAQPFVSEDYFHGRPTAVDQLTGQSGG DNMAESNPDRPKHNPELPGAIETSGSGLDPHISMEHAMSQVERISDARSVAADNIEKVIRETADGEPYVNVLMMNLALDE LN
Specific function: One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex [H]
COG id: COG2156
COG function: function code P; K+-transporting ATPase, c chain
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the kdpC family [H]
Homologues:
Organism=Escherichia coli, GI1786913, Length=190, Percent_Identity=34.7368421052632, Blast_Score=102, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003820 [H]
Pfam domain/function: PF02669 KdpC [H]
EC number: =3.6.3.12 [H]
Molecular weight: Translated: 17421; Mature: 17290
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSIKQAGIVVSLTMVLCGVAYPLALTVAGQALFPSQAEGSLIERDGEQIGSKWIAQPFV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC SEDYFHGRPTAVDQLTGQSGGDNMAESNPDRPKHNPELPGAIETSGSGLDPHISMEHAMS CCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHH QVERISDARSVAADNIEKVIRETADGEPYVNVLMMNLALDELN HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure SSIKQAGIVVSLTMVLCGVAYPLALTVAGQALFPSQAEGSLIERDGEQIGSKWIAQPFV CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC SEDYFHGRPTAVDQLTGQSGGDNMAESNPDRPKHNPELPGAIETSGSGLDPHISMEHAMS CCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHH QVERISDARSVAADNIEKVIRETADGEPYVNVLMMNLALDELN HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA