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The map label for this gene is kdpD [H]

Identifier: 229916973

GI number: 229916973

Start: 1222412

End: 1223491

Strand: Reverse

Name: kdpD [H]

Synonym: EAT1b_1247

Alternate gene names: 229916973

Gene position: 1223491-1222412 (Counterclockwise)

Preceding gene: 229916974

Following gene: 229916972

Centisome position: 40.78

GC content: 47.22

Gene sequence:

>1080_bases
ATGCGAGGCAAACTTCGACTTTATATCGGAGCTGCACCGGGTGTTGGTAAAACGTATAAAATGTTGGCAGACGCAAGAGC
CCATCAGCAAGAAGGGGTCTCGGTCATGATTGGATTGATTGAGACGCATGGGCGGAAAGAAACAGAGGCGATGATCGGCG
ATTTGCCAATCGTCCCTCTTCTTTCCATTCCCTATAAAGGACACGAATTGCAGGAATTAGACGTCGAGACCATCTTATCG
CTTCATCCTGATATCGTCCTCGTTGATGAGTTGGCTCATACGAATGCCCCAGGCTCAGTGCGGACGAAGCGATACCAGGA
CGTGCAAGTGTTGTTAGAGAACGGAATCGATGTATATGCGGCCGTTAATATTCAGCACTTTGAAAGTTTACTGTTGACGG
TGAAAGGGATCACCGGTGTCGAGGTAAGAGAACGGATTCCAGATCTTTTTCTCAATCGGGCTGATGAGATTCTGCTCGTC
GATGTGACGCCGCAGACGTTACAAGAACGGATGAGACAAGGGAAGATTTATCGACCTGACAAAATTGAGCAAAGTCTGTC
GTCATTTTTTACGCTGACCAATCTATCGAGTCTGCGTGAGATTGCGCTTCGACAAGTAGCGGATGAAGTCGATGATCAAG
TCTATCGAACCCGAAAAAATGTGGTGTCTGATCCGACGCTCCTCCAAGAGCGGATCATGGTCTGTATTCAGCTCAATGAC
AATGCGAGACATTTGATTTATCGAGGATTTCGCATGGCGAGTCGACTCAAAGCGAAGCTTTATATCTTGTCCGTCCTCCA
TGGTGAGGAGAGAAAATTGACACCTGAGCAGACTGCCATTCTAAAAGAAGTTCGAGAGCAAGGTGCATCATTCCAGGCAG
AAGTGATTGTCTTGAATGTACCGAGGAAAGAACTAACGAAGAATTTAACGACTACGGCACGAGAAAAACGCATTACCCAA
TTGATTCTTGGACAATCAGCAAGGACACGCTGGCAAGAAGTCATGCGCGGGTCGATTGTGAATGTCATCATGCGGGAATT
GAAGCAGGTGGACATCCATATCGTCTCGGATCAATCGTGA

Upstream 100 bases:

>100_bases
TAGCAGCAGATAATATCGAAAAAGTCATTCGCGAAACGGCAGACGGAGAACCGTACGTGAACGTCTTGATGATGAATCTT
GCACTTGATGAGTTGAACTG

Downstream 100 bases:

>100_bases
CAGGTGTGACGGGTCGGATGAACGGGAAGAGTGAATCATGCGAACAAAGGAGGGGTTTTATGAAGTATTTAGTCACAGGA
GCAACGGGTAAACTCGGTTC

Product: osmosensitive K channel signal transduction histidine kinase, sensor subunit KdpD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MRGKLRLYIGAAPGVGKTYKMLADARAHQQEGVSVMIGLIETHGRKETEAMIGDLPIVPLLSIPYKGHELQELDVETILS
LHPDIVLVDELAHTNAPGSVRTKRYQDVQVLLENGIDVYAAVNIQHFESLLLTVKGITGVEVRERIPDLFLNRADEILLV
DVTPQTLQERMRQGKIYRPDKIEQSLSSFFTLTNLSSLREIALRQVADEVDDQVYRTRKNVVSDPTLLQERIMVCIQLND
NARHLIYRGFRMASRLKAKLYILSVLHGEERKLTPEQTAILKEVREQGASFQAEVIVLNVPRKELTKNLTTTAREKRITQ
LILGQSARTRWQEVMRGSIVNVIMRELKQVDIHIVSDQS

Sequences:

>Translated_359_residues
MRGKLRLYIGAAPGVGKTYKMLADARAHQQEGVSVMIGLIETHGRKETEAMIGDLPIVPLLSIPYKGHELQELDVETILS
LHPDIVLVDELAHTNAPGSVRTKRYQDVQVLLENGIDVYAAVNIQHFESLLLTVKGITGVEVRERIPDLFLNRADEILLV
DVTPQTLQERMRQGKIYRPDKIEQSLSSFFTLTNLSSLREIALRQVADEVDDQVYRTRKNVVSDPTLLQERIMVCIQLND
NARHLIYRGFRMASRLKAKLYILSVLHGEERKLTPEQTAILKEVREQGASFQAEVIVLNVPRKELTKNLTTTAREKRITQ
LILGQSARTRWQEVMRGSIVNVIMRELKQVDIHIVSDQS
>Mature_359_residues
MRGKLRLYIGAAPGVGKTYKMLADARAHQQEGVSVMIGLIETHGRKETEAMIGDLPIVPLLSIPYKGHELQELDVETILS
LHPDIVLVDELAHTNAPGSVRTKRYQDVQVLLENGIDVYAAVNIQHFESLLLTVKGITGVEVRERIPDLFLNRADEILLV
DVTPQTLQERMRQGKIYRPDKIEQSLSSFFTLTNLSSLREIALRQVADEVDDQVYRTRKNVVSDPTLLQERIMVCIQLND
NARHLIYRGFRMASRLKAKLYILSVLHGEERKLTPEQTAILKEVREQGASFQAEVIVLNVPRKELTKNLTTTAREKRITQ
LILGQSARTRWQEVMRGSIVNVIMRELKQVDIHIVSDQS

Specific function: Member of the two-component regulatory system kdpD/kdpE involved in the regulation of the kdp operon. KdpD may function as a membrane-associated protein kinase that phosphorylates kdpE in response to environmental signals [H]

COG id: COG2205

COG function: function code T; Osmosensitive K+ channel histidine kinase

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the universal stress protein A family [H]

Homologues:

Organism=Escherichia coli, GI1786912, Length=333, Percent_Identity=40.5405405405405, Blast_Score=254, Evalue=4e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR003852
- InterPro:   IPR006016 [H]

Pfam domain/function: PF02702 KdpD; PF00582 Usp [H]

EC number: 2.7.3.-

Molecular weight: Translated: 40781; Mature: 40781

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGKLRLYIGAAPGVGKTYKMLADARAHQQEGVSVMIGLIETHGRKETEAMIGDLPIVPL
CCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHCCCHHHHHHHCCCCCCHH
LSIPYKGHELQELDVETILSLHPDIVLVDELAHTNAPGSVRTKRYQDVQVLLENGIDVYA
EECCCCCCCHHHHHHHHHHHCCCCEEEEEHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEE
AVNIQHFESLLLTVKGITGVEVRERIPDLFLNRADEILLVDVTPQTLQERMRQGKIYRPD
EECHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCCCCCCH
KIEQSLSSFFTLTNLSSLREIALRQVADEVDDQVYRTRKNVVSDPTLLQERIMVCIQLND
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHEEEEEEECC
NARHLIYRGFRMASRLKAKLYILSVLHGEERKLTPEQTAILKEVREQGASFQAEVIVLNV
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEEC
PRKELTKNLTTTAREKRITQLILGQSARTRWQEVMRGSIVNVIMRELKQVDIHIVSDQS
CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCC
>Mature Secondary Structure
MRGKLRLYIGAAPGVGKTYKMLADARAHQQEGVSVMIGLIETHGRKETEAMIGDLPIVPL
CCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHCCCHHHHHHHCCCCCCHH
LSIPYKGHELQELDVETILSLHPDIVLVDELAHTNAPGSVRTKRYQDVQVLLENGIDVYA
EECCCCCCCHHHHHHHHHHHCCCCEEEEEHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEE
AVNIQHFESLLLTVKGITGVEVRERIPDLFLNRADEILLVDVTPQTLQERMRQGKIYRPD
EECHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCCCCCCH
KIEQSLSSFFTLTNLSSLREIALRQVADEVDDQVYRTRKNVVSDPTLLQERIMVCIQLND
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHEEEEEEECC
NARHLIYRGFRMASRLKAKLYILSVLHGEERKLTPEQTAILKEVREQGASFQAEVIVLNV
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEEC
PRKELTKNLTTTAREKRITQLILGQSARTRWQEVMRGSIVNVIMRELKQVDIHIVSDQS
CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Transferring phosphorus-containing groups [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]