| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916907
Identifier: 229916907
GI number: 229916907
Start: 1151090
End: 1152028
Strand: Reverse
Name: 229916907
Synonym: EAT1b_1180
Alternate gene names: NA
Gene position: 1152028-1151090 (Counterclockwise)
Preceding gene: 229916908
Following gene: 229916906
Centisome position: 38.4
GC content: 54.53
Gene sequence:
>939_bases ATGAAGTGGAAAAAACTCGGACACATCTTCGACCCGGCGCCGTACGGATTTTTCGGGAAGTACTCCTCGTTCGCCCAGTC CCCTCAGGCGCTCGTCTTCGAGGATTTTGTGCGCATCTATTTCTCGACCCGTGAACCGGACGGTGACATGTTCAAGAGCC ACGTCCGATACGTGGACATGACACGTGATTTCAACGTCATCGACGTGTCCACAGATGAAATCATCCCCCTTGGAAAACGG GGGACGTTCGACGAACACGGGATCTTCCCATTTCACGTCACACGGACGCGTGATGGGCTTTATGGCTATACGAGTGGCTG GAGCCGTCGTGACTCGGTAGCTGTCGAAACGGGGATTGGACTCTCTGTCAGTCGGGACGAGGGAGAGACGTTCGAACGGC TCGGAGACGGACCGGTATTATCGGCGAGCATCGAGGAACCGTTTCTCGTCGGCGACCCTTTTGTCGTCACACGGGAAAAA TACTATATGTATTACATTTACGGGACGACATGGAAAGAGGGTCCGGATGGCGTCCAGGAACGGACGTATAAGATTGCGCT CGCCACATCAGAAGATGGACAGACGTTCAAGCGTCACGGAAGAATCGTTTCGGATGTGATCGCGGACGAGAGTCAGGCGC TTCCGACGGTGTTCGAGGCGGACGGACGTTACCATATGATTTTCTGTTTTCGGGACACCTTCGGCTTTCGAACCGACCCG TTACGCGGATATCGATTAGGTTACGCCTATTCGGAAAATCTGTTGGACTGGACGCGGGATGATGCGGCGCTCGGATTCGA GCGAAGTTCCGACGGGTGGGACGCGGACATGGAGTGTTATCCGCATGTCTTCGAGTGGGAGGGGCGGCACTATCTTCTCT ATAACGGGAACGAGTTTGGGCGACATGGATTTGGTGTCGCAATTTTGGAGGACGTATGA
Upstream 100 bases:
>100_bases CCCACACGTTCACGTTGAACGGGAAACGGTATTTACTCTATTTGGGCAATGAAGTCGGACGAGAAGGGTTCGGCATCGCG GAGCGCAAGGAGGGAGCGAG
Downstream 100 bases:
>100_bases TGACTCGCGACCAAGGGACGGTCTCTGACTATGTGGCGCATCTTGAGGCGTGTGATCACCTGTTCCCGACCAAGCTGTCG GAGCGGGTAGCGCTAGAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MKWKKLGHIFDPAPYGFFGKYSSFAQSPQALVFEDFVRIYFSTREPDGDMFKSHVRYVDMTRDFNVIDVSTDEIIPLGKR GTFDEHGIFPFHVTRTRDGLYGYTSGWSRRDSVAVETGIGLSVSRDEGETFERLGDGPVLSASIEEPFLVGDPFVVTREK YYMYYIYGTTWKEGPDGVQERTYKIALATSEDGQTFKRHGRIVSDVIADESQALPTVFEADGRYHMIFCFRDTFGFRTDP LRGYRLGYAYSENLLDWTRDDAALGFERSSDGWDADMECYPHVFEWEGRHYLLYNGNEFGRHGFGVAILEDV
Sequences:
>Translated_312_residues MKWKKLGHIFDPAPYGFFGKYSSFAQSPQALVFEDFVRIYFSTREPDGDMFKSHVRYVDMTRDFNVIDVSTDEIIPLGKR GTFDEHGIFPFHVTRTRDGLYGYTSGWSRRDSVAVETGIGLSVSRDEGETFERLGDGPVLSASIEEPFLVGDPFVVTREK YYMYYIYGTTWKEGPDGVQERTYKIALATSEDGQTFKRHGRIVSDVIADESQALPTVFEADGRYHMIFCFRDTFGFRTDP LRGYRLGYAYSENLLDWTRDDAALGFERSSDGWDADMECYPHVFEWEGRHYLLYNGNEFGRHGFGVAILEDV >Mature_312_residues MKWKKLGHIFDPAPYGFFGKYSSFAQSPQALVFEDFVRIYFSTREPDGDMFKSHVRYVDMTRDFNVIDVSTDEIIPLGKR GTFDEHGIFPFHVTRTRDGLYGYTSGWSRRDSVAVETGIGLSVSRDEGETFERLGDGPVLSASIEEPFLVGDPFVVTREK YYMYYIYGTTWKEGPDGVQERTYKIALATSEDGQTFKRHGRIVSDVIADESQALPTVFEADGRYHMIFCFRDTFGFRTDP LRGYRLGYAYSENLLDWTRDDAALGFERSSDGWDADMECYPHVFEWEGRHYLLYNGNEFGRHGFGVAILEDV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35895; Mature: 35895
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKWKKLGHIFDPAPYGFFGKYSSFAQSPQALVFEDFVRIYFSTREPDGDMFKSHVRYVDM CCHHHCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHEEEECCCCCHHHHHHHCEEEEE TRDFNVIDVSTDEIIPLGKRGTFDEHGIFPFHVTRTRDGLYGYTSGWSRRDSVAVETGIG CCCCEEEEECCCCEEECCCCCCCCCCCCEEEEEEECCCCCCEECCCCCCCCCEEEEECCC LSVSRDEGETFERLGDGPVLSASIEEPFLVGDPFVVTREKYYMYYIYGTTWKEGPDGVQE EEEECCCCHHHHHCCCCCEEEECCCCCEEECCCEEEEECEEEEEEEEECCCCCCCCCCCC RTYKIALATSEDGQTFKRHGRIVSDVIADESQALPTVFEADGRYHMIFCFRDTFGFRTDP EEEEEEEEECCCCHHHHHCCCCHHHHHCCCCCCCCEEEECCCCEEEEEEEECCCCCCCCC LRGYRLGYAYSENLLDWTRDDAALGFERSSDGWDADMECYPHVFEWEGRHYLLYNGNEFG CCCEEECEEECCCCHHCCCCCHHCCCCCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCC RHGFGVAILEDV CCCCCEEEEECC >Mature Secondary Structure MKWKKLGHIFDPAPYGFFGKYSSFAQSPQALVFEDFVRIYFSTREPDGDMFKSHVRYVDM CCHHHCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHEEEECCCCCHHHHHHHCEEEEE TRDFNVIDVSTDEIIPLGKRGTFDEHGIFPFHVTRTRDGLYGYTSGWSRRDSVAVETGIG CCCCEEEEECCCCEEECCCCCCCCCCCCEEEEEEECCCCCCEECCCCCCCCCEEEEECCC LSVSRDEGETFERLGDGPVLSASIEEPFLVGDPFVVTREKYYMYYIYGTTWKEGPDGVQE EEEECCCCHHHHHCCCCCEEEECCCCCEEECCCEEEEECEEEEEEEEECCCCCCCCCCCC RTYKIALATSEDGQTFKRHGRIVSDVIADESQALPTVFEADGRYHMIFCFRDTFGFRTDP EEEEEEEEECCCCHHHHHCCCCHHHHHCCCCCCCCEEEECCCCEEEEEEEECCCCCCCCC LRGYRLGYAYSENLLDWTRDDAALGFERSSDGWDADMECYPHVFEWEGRHYLLYNGNEFG CCCEEECEEECCCCHHCCCCCHHCCCCCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCC RHGFGVAILEDV CCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]